SNP Links for Nucleotide (Select 1005261301) - SNP

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Links from Nucleotide

Items: 1 to 20 of 121

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Select item 14820279971.

rs1482027997 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 21:42777928 (GRCh38)
21:44198038 (GRCh37)
Canonical SPDI:: NC_000021.9:42777927:A:C,NC_000021.9:42777927:A:G
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.00006/1 (TOMMO)
HGVS:: NC_000021.9:g.42777928A>C, NC_000021.9:g.42777928A>G, NC_000021.8:g.44198038A>C, NC_000021.8:g.44198038A>G, NR_135517.1:n.404T>G, NR_135517.1:n.404T>C

Select item 14783703722.

rs1478370372 [Homo sapiens]

Variant type:: SNV:
Alleles:: G>A
Chromosome:: no mapping
Canonical SPDI:

Select item 14775955963.

rs1477595596 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 21:42779959 (GRCh38)
21:44200069 (GRCh37)
Canonical SPDI:: NC_000021.9:42779958:T:C,NC_000021.9:42779958:T:G
Gene:: LINC01668 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
HGVS:: NC_000021.9:g.42779959T>C, NC_000021.9:g.42779959T>G, NC_000021.8:g.44200069T>C, NC_000021.8:g.44200069T>G, NR_135517.1:n.36A>G, NR_135517.1:n.36A>C

Select item 14688136804.

rs1468813680 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 21:42778105 (GRCh38)
21:44198215 (GRCh37)
Canonical SPDI:: NC_000021.9:42778104:T:G
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000021.9:g.42778105T>G, NC_000021.8:g.44198215T>G, NR_135517.1:n.326A>C

Select item 14422133885.

rs1442213388 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 21:42778252 (GRCh38)
21:44198362 (GRCh37)
Canonical SPDI:: NC_000021.9:42778251:G:C
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000142/2 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.42778252G>C, NC_000021.8:g.44198362G>C, NR_135517.1:n.179C>G

Select item 14367108466.

rs1436710846 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 21:42777913 (GRCh38)
21:44198023 (GRCh37)
Canonical SPDI:: NC_000021.9:42777912:G:A,NC_000021.9:42777912:G:C
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000021.9:g.42777913G>A, NC_000021.9:g.42777913G>C, NC_000021.8:g.44198023G>A, NC_000021.8:g.44198023G>C, NR_135517.1:n.419C>T, NR_135517.1:n.419C>G

Select item 14358770627.

rs1435877062 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 21:42777871 (GRCh38)
21:44197981 (GRCh37)
Canonical SPDI:: NC_000021.9:42777870:T:C
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000021.9:g.42777871T>C, NC_000021.8:g.44197981T>C, NR_135517.1:n.461A>G

Select item 14266616838.

rs1426661683 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 21:42778233 (GRCh38)
21:44198343 (GRCh37)
Canonical SPDI:: NC_000021.9:42778232:G:C
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000021.9:g.42778233G>C, NC_000021.8:g.44198343G>C, NR_135517.1:n.198C>G

Select item 14162333929.

rs1416233392 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 21:42778104 (GRCh38)
21:44198214 (GRCh37)
Canonical SPDI:: NC_000021.9:42778103:G:A
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
A=0.00006/16 (TOPMED)
A=0.000468/3 (1000Genomes)
A=0.000637/11 (TOMMO)
A=0.001638/3 (Korea1K)
A=0.002053/6 (KOREAN)
HGVS:: NC_000021.9:g.42778104G>A, NC_000021.8:g.44198214G>A, NR_135517.1:n.327C>T

Select item 141614853410.

rs1416148534 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 21:42778127 (GRCh38)
21:44198237 (GRCh37)
Canonical SPDI:: NC_000021.9:42778126:G:A,NC_000021.9:42778126:G:T
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000066/1 (ALFA)
T=0.000004/1 (TOPMED)
A=0.000223/1 (Estonian)
HGVS:: NC_000021.9:g.42778127G>A, NC_000021.9:g.42778127G>T, NC_000021.8:g.44198237G>A, NC_000021.8:g.44198237G>T, NR_135517.1:n.304C>T, NR_135517.1:n.304C>A

Select item 140503016511.

rs1405030165 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 21:42777990 (GRCh38)
21:44198100 (GRCh37)
Canonical SPDI:: NC_000021.9:42777989:G:T
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.42777990G>T, NC_000021.8:g.44198100G>T, NR_135517.1:n.342C>A

Select item 140016319112.

rs1400163191 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 21:42777979 (GRCh38)
21:44198089 (GRCh37)
Canonical SPDI:: NC_000021.9:42777978:C:T
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000021/3 (GnomAD)
T=0.000023/6 (TOPMED)
HGVS:: NC_000021.9:g.42777979C>T, NC_000021.8:g.44198089C>T, NR_135517.1:n.353G>A

Select item 139799740513.

rs1397997405 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 21:42777978 (GRCh38)
21:44198088 (GRCh37)
Canonical SPDI:: NC_000021.9:42777977:C:T
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000021.9:g.42777978C>T, NC_000021.8:g.44198088C>T, NR_135517.1:n.354G>A

Select item 139270982414.

rs1392709824 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 21:42777987 (GRCh38)
21:44198097 (GRCh37)
Canonical SPDI:: NC_000021.9:42777986:T:C
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000021.9:g.42777987T>C, NC_000021.8:g.44198097T>C, NR_135517.1:n.345A>G

Select item 139044605915.

rs1390446059 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 21:42778165 (GRCh38)
21:44198275 (GRCh37)
Canonical SPDI:: NC_000021.9:42778164:A:G
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000021.9:g.42778165A>G, NC_000021.8:g.44198275A>G, NR_135517.1:n.266T>C

Select item 136827487416.

rs1368274874 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 21:42778228 (GRCh38)
21:44198338 (GRCh37)
Canonical SPDI:: NC_000021.9:42778227:G:A,NC_000021.9:42778227:G:T
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
A=0.000071/1 (TOMMO)
HGVS:: NC_000021.9:g.42778228G>A, NC_000021.9:g.42778228G>T, NC_000021.8:g.44198338G>A, NC_000021.8:g.44198338G>T, NR_135517.1:n.203C>T, NR_135517.1:n.203C>A

Select item 136609950617.

rs1366099506 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 21:42777991 (GRCh38)
21:44198101 (GRCh37)
Canonical SPDI:: NC_000021.9:42777990:C:G
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000021.9:g.42777991C>G, NC_000021.8:g.44198101C>G, NR_135517.1:n.341G>C

Select item 136418999818.

rs1364189998 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 21:42778238 (GRCh38)
21:44198348 (GRCh37)
Canonical SPDI:: NC_000021.9:42778237:C:T
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000021.9:g.42778238C>T, NC_000021.8:g.44198348C>T, NR_135517.1:n.193G>A

Select item 135522298219.

rs1355222982 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 21:42778227 (GRCh38)
21:44198337 (GRCh37)
Canonical SPDI:: NC_000021.9:42778226:C:A,NC_000021.9:42778226:C:G,NC_000021.9:42778226:C:T
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000021.9:g.42778227C>A, NC_000021.9:g.42778227C>G, NC_000021.9:g.42778227C>T, NC_000021.8:g.44198337C>A, NC_000021.8:g.44198337C>G, NC_000021.8:g.44198337C>T, NR_135517.1:n.204G>T, NR_135517.1:n.204G>C, NR_135517.1:n.204G>A

Select item 134453008320.

rs1344530083 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 21:42778190 (GRCh38)
21:44198300 (GRCh37)
Canonical SPDI:: NC_000021.9:42778189:G:C
Gene:: LINC01668 (Varview), LOC107985504 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000021/3 (GnomAD)
C=0.000045/12 (TOPMED)
HGVS:: NC_000021.9:g.42778190G>C, NC_000021.8:g.44198300G>C, NR_135517.1:n.241C>G