SNP Links for Nucleotide (Select 1007404335) - SNP

Links from Nucleotide

Items: 1 to 20 of 121

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Select item 14884966481.

rs1488496648 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:104412586 (GRCh38)
2:105029044 (GRCh37)
Canonical SPDI:: NC_000002.12:104412585:C:T
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.104412586C>T, NC_000002.11:g.105029044C>T, NR_135589.1:n.157G>A

Select item 14865868662.

rs1486586866 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 2:104412486 (GRCh38)
2:105028944 (GRCh37)
Canonical SPDI:: NC_000002.12:104412485:A:C
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000019/5 (TOPMED)
HGVS:: NC_000002.12:g.104412486A>C, NC_000002.11:g.105028944A>C, NR_135589.1:n.257T>G

Select item 14861650703.

rs1486165070 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:104413982 (GRCh38)
2:105030440 (GRCh37)
Canonical SPDI:: NC_000002.12:104413981:G:A
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
A=0.00003/8 (TOPMED)
A=0.000342/1 (KOREAN)
A=0.000637/11 (TOMMO)
HGVS:: NC_000002.12:g.104413982G>A, NC_000002.11:g.105030440G>A, NR_135589.1:n.50C>T

Select item 14780791954.

rs1478079195 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 2:104412649 (GRCh38)
2:105029107 (GRCh37)
Canonical SPDI:: NC_000002.12:104412648:GGG:GG
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.104412651del, NC_000002.11:g.105029109del, NR_135589.1:n.94del

Select item 14758883725.

rs1475888372 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 2:104412575 (GRCh38)
2:105029033 (GRCh37)
Canonical SPDI:: NC_000002.12:104412574:C:G,NC_000002.12:104412574:C:T
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
T=0.000035/1 (TOMMO)
HGVS:: NC_000002.12:g.104412575C>G, NC_000002.12:g.104412575C>T, NC_000002.11:g.105029033C>G, NC_000002.11:g.105029033C>T, NR_135589.1:n.168G>C, NR_135589.1:n.168G>A

Select item 14645809136.

rs1464580913 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:104412299 (GRCh38)
2:105028757 (GRCh37)
Canonical SPDI:: NC_000002.12:104412298:A:G
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.104412299A>G, NC_000002.11:g.105028757A>G, NR_135589.1:n.444T>C

Select item 14608147517.

rs1460814751 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:104412633 (GRCh38)
2:105029091 (GRCh37)
Canonical SPDI:: NC_000002.12:104412632:A:G
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.104412633A>G, NC_000002.11:g.105029091A>G, NR_135589.1:n.110T>C

Select item 14560126358.

rs1456012635 [Homo sapiens]

Variant type:: DELINS
Alleles:: TCAA>- [Show Flanks]
Chromosome:: 2:104412565 (GRCh38)
2:105029023 (GRCh37)
Canonical SPDI:: NC_000002.12:104412561:CAATCAA:CAA
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CAA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.104412565_104412568del, NC_000002.11:g.105029023_105029026del, NR_135589.1:n.178_181del

Select item 14507411129.

rs1450741112 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 2:104412417 (GRCh38)
2:105028876 (GRCh37)
Canonical SPDI:: NC_000002.12:104412417:A:AA
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AA=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.104412418dup, NC_000002.11:g.105028876dup, NR_135589.1:n.325dup

Select item 142066107510.

rs1420661075 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:104412433 (GRCh38)
2:105028891 (GRCh37)
Canonical SPDI:: NC_000002.12:104412432:A:G
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000002.12:g.104412433A>G, NC_000002.11:g.105028891A>G, NR_135589.1:n.310T>C

Select item 140105551211.

rs1401055512 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 2:104412547 (GRCh38)
2:105029005 (GRCh37)
Canonical SPDI:: NC_000002.12:104412546:C:A
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.104412547C>A, NC_000002.11:g.105029005C>A, NR_135589.1:n.196G>T

Select item 140103318212.

rs1401033182 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 2:104412189 (GRCh38)
2:105028647 (GRCh37)
Canonical SPDI:: NC_000002.12:104412188:G:T
Gene:: LINC01831 (Varview), LOC124908058 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.104412189G>T, NC_000002.11:g.105028647G>T, NR_135589.1:n.554C>A

Select item 139916921513.

rs1399169215 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 2:104412375 (GRCh38)
2:105028833 (GRCh37)
Canonical SPDI:: NC_000002.12:104412374:C:G
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.104412375C>G, NC_000002.11:g.105028833C>G, NR_135589.1:n.368G>C

Select item 139442280714.

rs1394422807 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 2:104412397 (GRCh38)
2:105028855 (GRCh37)
Canonical SPDI:: NC_000002.12:104412396:T:A
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.104412397T>A, NC_000002.11:g.105028855T>A, NR_135589.1:n.346A>T

Select item 138997000615.

rs1389970006 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 2:104412384 (GRCh38)
2:105028842 (GRCh37)
Canonical SPDI:: NC_000002.12:104412383:G:C
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.104412384G>C, NC_000002.11:g.105028842G>C, NR_135589.1:n.359C>G

Select item 138976696216.

rs1389766962 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 2:104412217 (GRCh38)
2:105028676 (GRCh37)
Canonical SPDI:: NC_000002.12:104412217:TT:TTT
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000002.12:g.104412219dup, NC_000002.11:g.105028677dup, NR_135589.1:n.525dup

Select item 137852562017.

rs1378525620 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:104412402 (GRCh38)
2:105028860 (GRCh37)
Canonical SPDI:: NC_000002.12:104412401:T:C
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.104412402T>C, NC_000002.11:g.105028860T>C, NR_135589.1:n.341A>G

Select item 137777009318.

rs1377770093 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 2:104412287 (GRCh38)
2:105028745 (GRCh37)
Canonical SPDI:: NC_000002.12:104412286:C:A
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.104412287C>A, NC_000002.11:g.105028745C>A, NR_135589.1:n.456G>T

Select item 137461661819.

rs1374616618 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 2:104412667 (GRCh38)
2:105029125 (GRCh37)
Canonical SPDI:: NC_000002.12:104412666:T:A
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.104412667T>A, NC_000002.11:g.105029125T>A, NR_135589.1:n.76A>T

Select item 137093552020.

rs1370935520 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:104412619 (GRCh38)
2:105029077 (GRCh37)
Canonical SPDI:: NC_000002.12:104412618:T:C
Gene:: LINC01831 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.00003/8 (TOPMED)
C=0.00005/7 (GnomAD)
HGVS:: NC_000002.12:g.104412619T>C, NC_000002.11:g.105029077T>C, NR_135589.1:n.124A>G

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