SNP Links for Nucleotide (Select 1034642981) - SNP

Links from Nucleotide

Items: 1 to 20 of 187

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Select item 14882023251.

rs1488202325 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:149254316 (GRCh38)
4:150175468 (GRCh37)
Canonical SPDI:: NC_000004.12:149254315:C:T
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.149254316C>T, NC_000004.11:g.150175468C>T, XR_001741885.1:n.407G>A

Select item 14829251152.

rs1482925115 [Homo sapiens]

Variant type:: DEL
Alleles:: T>- [Show Flanks]
Chromosome:: 4:149262216 (GRCh38)
4:150183368 (GRCh37)
Canonical SPDI:: NC_000004.12:149262215:T:
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.149262216del, NC_000004.11:g.150183368del, XR_001741885.1:n.128del

Select item 14781284083.

rs1478128408 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:149254380 (GRCh38)
4:150175532 (GRCh37)
Canonical SPDI:: NC_000004.12:149254379:A:G
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.149254380A>G, NC_000004.11:g.150175532A>G, XR_001741885.1:n.343T>C

Select item 14697546914.

rs1469754691 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:149248889 (GRCh38)
4:150170041 (GRCh37)
Canonical SPDI:: NC_000004.12:149248888:A:G
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.149248889A>G, NC_000004.11:g.150170041A>G, XR_001741885.1:n.514T>C

Select item 14675739435.

rs1467573943 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 4:149248795 (GRCh38)
4:150169947 (GRCh37)
Canonical SPDI:: NC_000004.12:149248794:G:C
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.149248795G>C, NC_000004.11:g.150169947G>C, XR_001741885.1:n.608C>G

Select item 14673167266.

rs1467316726 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:149248896 (GRCh38)
4:150170048 (GRCh37)
Canonical SPDI:: NC_000004.12:149248895:T:C
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.149248896T>C, NC_000004.11:g.150170048T>C, XR_001741885.1:n.507A>G

Select item 14639956027.

rs1463995602 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 4:149264343 (GRCh38)
4:150185495 (GRCh37)
Canonical SPDI:: NC_000004.12:149264342:C:G
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000004.12:g.149264343C>G, NC_000004.11:g.150185495C>G, XR_001741885.1:n.83G>C

Select item 14501085198.

rs1450108519 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:149262235 (GRCh38)
4:150183387 (GRCh37)
Canonical SPDI:: NC_000004.12:149262234:C:T
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.149262235C>T, NC_000004.11:g.150183387C>T, XR_001741885.1:n.109G>A

Select item 14485461729.

rs1448546172 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 4:149248873 (GRCh38)
4:150170025 (GRCh37)
Canonical SPDI:: NC_000004.12:149248872:A:T
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.149248873A>T, NC_000004.11:g.150170025A>T, XR_001741885.1:n.530T>A

Select item 144713938210.

rs1447139382 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:149262154 (GRCh38)
4:150183306 (GRCh37)
Canonical SPDI:: NC_000004.12:149262153:C:T
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000004.12:g.149262154C>T, NC_000004.11:g.150183306C>T, XR_001741885.1:n.190G>A

Select item 144570512011.

rs1445705120 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 4:149248647 (GRCh38)
4:150169799 (GRCh37)
Canonical SPDI:: NC_000004.12:149248646:T:A
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.149248647T>A, NC_000004.11:g.150169799T>A, XR_001741885.1:n.756A>T

Select item 144270815812.

rs1442708158 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 4:149248863 (GRCh38)
4:150170015 (GRCh37)
Canonical SPDI:: NC_000004.12:149248862:C:G
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.149248863C>G, NC_000004.11:g.150170015C>G, XR_001741885.1:n.540G>C

Select item 144078906413.

rs1440789064 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:149254399 (GRCh38)
4:150175551 (GRCh37)
Canonical SPDI:: NC_000004.12:149254398:G:A
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.149254399G>A, NC_000004.11:g.150175551G>A, XR_001741885.1:n.324C>T

Select item 143768263914.

rs1437682639 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:149248945 (GRCh38)
4:150170097 (GRCh37)
Canonical SPDI:: NC_000004.12:149248944:T:C
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.149248945T>C, NC_000004.11:g.150170097T>C, XR_001741885.1:n.458A>G

Select item 143471571215.

rs1434715712 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ACCTTTCCATCTCCTCTGTGT [Show Flanks]
Chromosome:: 4:149262166 (GRCh38)
4:150183319 (GRCh37)
Canonical SPDI:: NC_000004.12:149262166:ACCTTTCCATCTCCTCTGTGT:ACCTTTCCATCTCCTCTGTGTACCTTTCCATCTCCTCTGTGT
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: ACCTTTCCATCTCCTCTGTGTACCTTTCCATCTCCTCTGTGT=0./0 (ALFA)
ACCTTTCCATCTCCTCTGTGT=0.000043/6 (GnomAD)
HGVS:: NC_000004.12:g.149262167_149262187dup, NC_000004.11:g.150183319_150183339dup, XR_001741885.1:n.157_177dup

Select item 142530949716.

rs1425309497 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 4:149254441 (GRCh38)
4:150175593 (GRCh37)
Canonical SPDI:: NC_000004.12:149254440:C:A,NC_000004.12:149254440:C:T
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000021/3 (GnomAD)
HGVS:: NC_000004.12:g.149254441C>A, NC_000004.12:g.149254441C>T, NC_000004.11:g.150175593C>A, NC_000004.11:g.150175593C>T, XR_001741885.1:n.282G>T, XR_001741885.1:n.282G>A

Select item 142236636317.

rs1422366363 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 4:149254362 (GRCh38)
4:150175514 (GRCh37)
Canonical SPDI:: NC_000004.12:149254361:C:A,NC_000004.12:149254361:C:T
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.149254362C>A, NC_000004.12:g.149254362C>T, NC_000004.11:g.150175514C>A, NC_000004.11:g.150175514C>T, XR_001741885.1:n.361G>T, XR_001741885.1:n.361G>A

Select item 142166504618.

rs1421665046 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 4:149248722 (GRCh38)
4:150169874 (GRCh37)
Canonical SPDI:: NC_000004.12:149248721:C:G
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.149248722C>G, NC_000004.11:g.150169874C>G, XR_001741885.1:n.681G>C

Select item 142000873419.

rs1420008734 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:149254468 (GRCh38)
4:150175620 (GRCh37)
Canonical SPDI:: NC_000004.12:149254467:T:C
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.149254468T>C, NC_000004.11:g.150175620T>C, XR_001741885.1:n.255A>G

Select item 141839334320.

rs1418393343 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 4:149248701 (GRCh38)
4:150169853 (GRCh37)
Canonical SPDI:: NC_000004.12:149248700:C:G
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000004.12:g.149248701C>G, NC_000004.11:g.150169853C>G, XR_001741885.1:n.702G>C

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