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Links from Nucleotide

Items: 1 to 20 of 1894

1.
2.

rs1491172331 [Homo sapiens]
    Variant type:
    DEL
    Alleles:
    GA>- [Show Flanks]
    Chromosome:
    5:33525435 (GRCh38)
    5:33525540 (GRCh37)
    Canonical SPDI:
    NC_000005.10:33525434:GA:
    Gene:
    ADAMTS12 (Varview)
    Functional Consequence:
    3_prime_UTR_variant,genic_downstream_transcript_variant
    Validated:
    by frequency,by alfa
    MAF:
    -=0./0 (ALFA)
    -=0.000007/1 (GnomAD)
    HGVS:
    4.

    rs1489585052 [Homo sapiens]
      Variant type:
      DELINS
      Alleles:
      GA>- [Show Flanks]
      Chromosome:
      5:33524448 (GRCh38)
      5:33524553 (GRCh37)
      Canonical SPDI:
      NC_000005.10:33524444:AGAGA:AGA
      Gene:
      ADAMTS12 (Varview), LOC105374717 (Varview)
      Functional Consequence:
      3_prime_UTR_variant,upstream_transcript_variant,genic_downstream_transcript_variant,2KB_upstream_variant
      Validated:
      by frequency,by alfa
      MAF:
      AGA=0./0 (ALFA)
      -=0.000004/1 (TOPMED)
      HGVS:
      5.

      rs1489520032 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        T>C [Show Flanks]
        Chromosome:
        5:33524001 (GRCh38)
        5:33524106 (GRCh37)
        Canonical SPDI:
        NC_000005.10:33524000:T:C
        Gene:
        ADAMTS12 (Varview), LOC105374717 (Varview)
        Functional Consequence:
        3_prime_UTR_variant,upstream_transcript_variant,genic_downstream_transcript_variant,2KB_upstream_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        C=0./0 (ALFA)
        C=0.000007/1 (GnomAD)
        C=0.000023/6 (TOPMED)
        HGVS:
        6.
        7.

        rs1488350442 [Homo sapiens]
          Variant type:
          DELINS
          Alleles:
          ->GTATG [Show Flanks]
          Chromosome:
          5:33525569 (GRCh38)
          5:33525675 (GRCh37)
          Canonical SPDI:
          NC_000005.10:33525569:GTATG:GTATGGTATG
          Gene:
          ADAMTS12 (Varview)
          Functional Consequence:
          3_prime_UTR_variant,genic_downstream_transcript_variant
          Validated:
          by frequency,by alfa
          MAF:
          GTATGGTATG=0./0 (ALFA)
          GTATG=0.000004/1 (TOPMED)
          HGVS:
          8.

          rs1488021598 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            C>T [Show Flanks]
            Chromosome:
            5:33526177 (GRCh38)
            5:33526282 (GRCh37)
            Canonical SPDI:
            NC_000005.10:33526176:C:T
            Gene:
            ADAMTS12 (Varview)
            Functional Consequence:
            3_prime_UTR_variant,genic_downstream_transcript_variant
            Validated:
            by frequency,by alfa
            MAF:
            T=0./0 (ALFA)
            T=0.000004/1 (TOPMED)
            HGVS:
            9.

            rs1487618174 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              A>G [Show Flanks]
              Chromosome:
              5:33637725 (GRCh38)
              5:33637830 (GRCh37)
              Canonical SPDI:
              NC_000005.10:33637724:A:G
              Gene:
              ADAMTS12 (Varview)
              Functional Consequence:
              synonymous_variant,upstream_transcript_variant,coding_sequence_variant,genic_downstream_transcript_variant,genic_upstream_transcript_variant
              Validated:
              by frequency
              MAF:
              G=0.000004/1 (GnomAD_exomes)
              HGVS:
              10.

              rs1487584889 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                A>G [Show Flanks]
                Chromosome:
                5:33578776 (GRCh38)
                5:33578881 (GRCh37)
                Canonical SPDI:
                NC_000005.10:33578775:A:G
                Gene:
                ADAMTS12 (Varview)
                Functional Consequence:
                intron_variant,missense_variant,genic_downstream_transcript_variant,coding_sequence_variant
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                G=0./0 (ALFA)
                G=0.000007/1 (GnomAD)
                G=0.000011/3 (TOPMED)
                HGVS:
                11.

                rs1487566537 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  A>G [Show Flanks]
                  Chromosome:
                  5:33525049 (GRCh38)
                  5:33525154 (GRCh37)
                  Canonical SPDI:
                  NC_000005.10:33525048:A:G
                  Gene:
                  ADAMTS12 (Varview)
                  Functional Consequence:
                  3_prime_UTR_variant,genic_downstream_transcript_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  G=0./0 (ALFA)
                  G=0.000008/2 (TOPMED)
                  G=0.000014/2 (GnomAD)
                  G=0.000546/1 (Korea1K)
                  G=0.001026/17 (TOMMO)
                  HGVS:
                  12.

                  rs1487514990 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    C>T [Show Flanks]
                    Chromosome:
                    5:33526280 (GRCh38)
                    5:33526385 (GRCh37)
                    Canonical SPDI:
                    NC_000005.10:33526279:C:T
                    Gene:
                    ADAMTS12 (Varview)
                    Functional Consequence:
                    3_prime_UTR_variant,genic_downstream_transcript_variant
                    Validated:
                    by frequency,by alfa
                    MAF:
                    T=0./0 (ALFA)
                    T=0.000004/1 (TOPMED)
                    HGVS:
                    14.

                    rs1485942386 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      C>T [Show Flanks]
                      Chromosome:
                      5:33527046 (GRCh38)
                      5:33527151 (GRCh37)
                      Canonical SPDI:
                      NC_000005.10:33527045:C:T
                      Gene:
                      ADAMTS12 (Varview)
                      Functional Consequence:
                      3_prime_UTR_variant,genic_downstream_transcript_variant
                      Validated:
                      by frequency,by alfa
                      MAF:
                      T=0.000071/1 (ALFA)
                      T=0.000008/2 (TOPMED)
                      HGVS:
                      15.

                      rs1485849374 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        G>A [Show Flanks]
                        Chromosome:
                        5:33588717 (GRCh38)
                        5:33588822 (GRCh37)
                        Canonical SPDI:
                        NC_000005.10:33588716:G:A
                        Gene:
                        ADAMTS12 (Varview)
                        Functional Consequence:
                        missense_variant,genic_downstream_transcript_variant,coding_sequence_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        A=0./0 (ALFA)
                        A=0.000004/1 (GnomAD_exomes)
                        A=0.000007/1 (GnomAD)
                        HGVS:
                        16.

                        rs1485465445 [Homo sapiens]
                          Variant type:
                          DELINS
                          Alleles:
                          T>- [Show Flanks]
                          Chromosome:
                          5:33524971 (GRCh38)
                          5:33525076 (GRCh37)
                          Canonical SPDI:
                          NC_000005.10:33524970:TT:T
                          Gene:
                          ADAMTS12 (Varview)
                          Functional Consequence:
                          3_prime_UTR_variant,genic_downstream_transcript_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          TT=0./0 (ALFA)
                          -=0.000008/2 (TOPMED)
                          -=0.000021/3 (GnomAD)
                          HGVS:
                          17.

                          rs1485427443 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            C>T [Show Flanks]
                            Chromosome:
                            5:33523863 (GRCh38)
                            5:33523968 (GRCh37)
                            Canonical SPDI:
                            NC_000005.10:33523862:C:T
                            Gene:
                            ADAMTS12 (Varview), LOC105374717 (Varview)
                            Functional Consequence:
                            3_prime_UTR_variant,upstream_transcript_variant,genic_downstream_transcript_variant,2KB_upstream_variant
                            Validated:
                            by frequency,by alfa,by cluster
                            MAF:
                            T=0./0 (ALFA)
                            T=0.000004/1 (TOPMED)
                            T=0.000007/1 (GnomAD)
                            HGVS:
                            19.
                            20.

                            rs1483532742 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              C>G [Show Flanks]
                              Chromosome:
                              5:33525192 (GRCh38)
                              5:33525297 (GRCh37)
                              Canonical SPDI:
                              NC_000005.10:33525191:C:G
                              Gene:
                              ADAMTS12 (Varview)
                              Functional Consequence:
                              3_prime_UTR_variant,genic_downstream_transcript_variant
                              Validated:
                              by frequency,by alfa,by cluster
                              MAF:
                              G=0./0 (ALFA)
                              G=0.000004/1 (TOPMED)
                              G=0.000007/1 (GnomAD)
                              G=0.000156/1 (1000Genomes)
                              C=0.5/1 (SGDP_PRJ)
                              HGVS:

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