SNP Links for Nucleotide (Select 1187954520) - SNP

Links from Nucleotide

Items: 1 to 20 of 607

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Select item 14878309471.

rs1487830947 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:217937540 (GRCh38)
2:218802263 (GRCh37)
Canonical SPDI:: NC_000002.12:217937539:G:A
Gene:: TNS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.217937540G>A, NC_000002.11:g.218802263G>A, NG_053821.1:g.1193G>A, XM_024453080.2:c.-560C>T, XM_047445647.1:c.-560C>T

Select item 14876121432.

rs1487612143 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 2:217937114 (GRCh38)
2:218801837 (GRCh37)
Canonical SPDI:: NC_000002.12:217937113:G:T
Gene:: TNS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.217937114G>T, NC_000002.11:g.218801837G>T, NG_053821.1:g.767G>T, XM_024453080.2:c.-134C>A, XM_024453080.1:c.-134C>A, XM_047445647.1:c.-134C>A

Select item 14866303003.

rs1486630300 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:217938862 (GRCh38)
2:218803585 (GRCh37)
Canonical SPDI:: NC_000002.12:217938861:G:A
Gene:: TNS1 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000034/9 (TOPMED)
A=0.000036/5 (GnomAD)
HGVS:: NC_000002.12:g.217938862G>A, NC_000002.11:g.218803585G>A, NG_053821.1:g.2515G>A

Select item 14816611664.

rs1481661166 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:217937270 (GRCh38)
2:218801993 (GRCh37)
Canonical SPDI:: NC_000002.12:217937269:C:T
Gene:: TNS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000002.12:g.217937270C>T, NC_000002.11:g.218801993C>T, NG_053821.1:g.923C>T, XM_024453080.2:c.-290G>A, XM_047445647.1:c.-290G>A

Select item 14806774035.

rs1480677403 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:217938246 (GRCh38)
2:218802969 (GRCh37)
Canonical SPDI:: NC_000002.12:217938245:A:G
Gene:: TNS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.217938246A>G, NC_000002.11:g.218802969A>G, NG_053821.1:g.1899A>G

Select item 14779422276.

rs1477942227 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:217938758 (GRCh38)
2:218803481 (GRCh37)
Canonical SPDI:: NC_000002.12:217938757:T:C
Gene:: TNS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000019/5 (TOPMED)
C=0.000342/1 (KOREAN)
C=0.001092/2 (Korea1K)
C=0.001416/24 (TOMMO)
HGVS:: NC_000002.12:g.217938758T>C, NC_000002.11:g.218803481T>C, NG_053821.1:g.2411T>C

Select item 14778881067.

rs1477888106 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 2:217937535 (GRCh38)
2:218802258 (GRCh37)
Canonical SPDI:: NC_000002.12:217937534:A:C
Gene:: TNS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,5_prime_UTR_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.217937535A>C, NC_000002.11:g.218802258A>C, NG_053821.1:g.1188A>C, XM_024453080.2:c.-555T>G, XM_047445647.1:c.-555T>G

Select item 14776261138.

rs1477626113 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:217938415 (GRCh38)
2:218803138 (GRCh37)
Canonical SPDI:: NC_000002.12:217938414:G:A
Gene:: TNS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000002.12:g.217938415G>A, NC_000002.11:g.218803138G>A, NG_053821.1:g.2068G>A

Select item 14751804309.

rs1475180430 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:217938905 (GRCh38)
2:218803628 (GRCh37)
Canonical SPDI:: NC_000002.12:217938904:T:C
Gene:: TNS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.217938905T>C, NC_000002.11:g.218803628T>C, NG_053821.1:g.2558T>C

Select item 147348731510.

rs1473487315 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 2:217937451 (GRCh38)
2:218802174 (GRCh37)
Canonical SPDI:: NC_000002.12:217937450:G:T
Gene:: TNS1 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000002.12:g.217937451G>T, NC_000002.11:g.218802174G>T, NG_053821.1:g.1104G>T, XM_024453080.2:c.-471C>A, XM_047445647.1:c.-471C>A

Select item 147071387511.

rs1470713875 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:217937357 (GRCh38)
2:218802080 (GRCh37)
Canonical SPDI:: NC_000002.12:217937356:C:T
Gene:: TNS1 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.217937357C>T, NC_000002.11:g.218802080C>T, NG_053821.1:g.1010C>T, XM_024453080.2:c.-377G>A, XM_047445647.1:c.-377G>A

Select item 146810534312.

rs1468105343 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:217938242 (GRCh38)
2:218802965 (GRCh37)
Canonical SPDI:: NC_000002.12:217938241:C:T
Gene:: TNS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.217938242C>T, NC_000002.11:g.218802965C>T, NG_053821.1:g.1895C>T

Select item 146758973513.

rs1467589735 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 2:217938101 (GRCh38)
2:218802824 (GRCh37)
Canonical SPDI:: NC_000002.12:217938100:C:G
Gene:: TNS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000002.12:g.217938101C>G, NC_000002.11:g.218802824C>G, NG_053821.1:g.1754C>G

Select item 146568583014.

rs1465685830 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:217937628 (GRCh38)
2:218802351 (GRCh37)
Canonical SPDI:: NC_000002.12:217937627:T:C
Gene:: TNS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.217937628T>C, NC_000002.11:g.218802351T>C, NG_053821.1:g.1281T>C

Select item 146449103915.

rs1464491039 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 2:217937783 (GRCh38)
2:218802506 (GRCh37)
Canonical SPDI:: NC_000002.12:217937782:G:C
Gene:: TNS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.217937783G>C, NC_000002.11:g.218802506G>C, NG_053821.1:g.1436G>C

Select item 146194092916.

rs1461940929 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 2:217936946 (GRCh38)
2:218801669 (GRCh37)
Canonical SPDI:: NC_000002.12:217936945:G:T
Gene:: TNS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.217936946G>T, NC_000002.11:g.218801669G>T, NG_053821.1:g.599G>T

Select item 146144977817.

rs1461449778 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:217938709 (GRCh38)
2:218803432 (GRCh37)
Canonical SPDI:: NC_000002.12:217938708:G:A
Gene:: TNS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000019/5 (TOPMED)
HGVS:: NC_000002.12:g.217938709G>A, NC_000002.11:g.218803432G>A, NG_053821.1:g.2362G>A

Select item 145812390818.

rs1458123908 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:217936931 (GRCh38)
2:218801654 (GRCh37)
Canonical SPDI:: NC_000002.12:217936930:T:C
Gene:: TNS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000002.12:g.217936931T>C, NC_000002.11:g.218801654T>C, NG_053821.1:g.584T>C

Select item 145552914519.

rs1455529145 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:217938332 (GRCh38)
2:218803055 (GRCh37)
Canonical SPDI:: NC_000002.12:217938331:G:A
Gene:: TNS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000142/2 (ALFA)
A=0.000026/7 (TOPMED)
A=0.00005/7 (GnomAD)
HGVS:: NC_000002.12:g.217938332G>A, NC_000002.11:g.218803055G>A, NG_053821.1:g.1985G>A

Select item 145546415120.

rs1455464151 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:217936952 (GRCh38)
2:218801675 (GRCh37)
Canonical SPDI:: NC_000002.12:217936951:C:T
Gene:: TNS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
T=0.000029/4 (GnomAD_exomes)
HGVS:: NC_000002.12:g.217936952C>T, NC_000002.11:g.218801675C>T, NG_053821.1:g.605C>T

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