SNP Links for Nucleotide (Select 1187955387) - SNP

Links from Nucleotide

Items: 1 to 20 of 2785

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Select item 14915813381.

rs1491581338 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GATA [Show Flanks]
Chromosome:: 16:65322633 (GRCh38)
16:65356537 (GRCh37)
Canonical SPDI:: NC_000016.10:65322633:TA:TAGATA
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TAGATA=0.00008/1 (ALFA)
HGVS:: NC_000016.10:g.65322635_65322636insGATA, NC_000016.9:g.65356538_65356539insGATA, NG_052660.1:g.1073_1074insGATA

Select item 14915718842.

rs1491571884 [Homo sapiens]

Variant type:: DEL
Alleles:: TT>- [Show Flanks]
Chromosome:: 16:65321763 (GRCh38)
16:65355666 (GRCh37)
Canonical SPDI:: NC_000016.10:65321762:TT:
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.65321763_65321764del, NC_000016.9:g.65355666_65355667del, NG_052660.1:g.201_202del

Select item 14915493873.

rs1491549387 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CT,T [Show Flanks]
Chromosome:: 16:65322938 (GRCh38)
16:65356842 (GRCh37)
Canonical SPDI:: NC_000016.10:65322938:T:TCT,NC_000016.10:65322938:T:TT
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
HGVS:: NC_000016.10:g.65322939_65322940insCT, NC_000016.10:g.65322939dup, NC_000016.9:g.65356842_65356843insCT, NC_000016.9:g.65356842dup, NG_052660.1:g.1377_1378insCT, NG_052660.1:g.1377dup

Select item 14915393024.

rs1491539302 [Homo sapiens]

Variant type:: DEL
Alleles:: TA>- [Show Flanks]
Chromosome:: 16:65322729 (GRCh38)
16:65356632 (GRCh37)
Canonical SPDI:: NC_000016.10:65322728:TA:
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00008/1 (ALFA)
HGVS:: NC_000016.10:g.65322729_65322730del, NC_000016.9:g.65356632_65356633del, NG_052660.1:g.1167_1168del

Select item 14915322475.

rs1491532247 [Homo sapiens]

Variant type:: DEL
Alleles:: AA>- [Show Flanks]
Chromosome:: 16:65323191 (GRCh38)
16:65357094 (GRCh37)
Canonical SPDI:: NC_000016.10:65323190:AA:
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.00002/1 (GnomAD)
HGVS:: NC_000016.10:g.65323191_65323192del, NC_000016.9:g.65357094_65357095del, NG_052660.1:g.1629_1630del

Select item 14915262896.

rs1491526289 has merged into rs1367499322 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATAT>-,AT,ATATAT [Show Flanks]
Chromosome:: 16:65322738 (GRCh38)
16:65356641 (GRCh37)
Canonical SPDI:: NC_000016.10:65322731:ATATATATAT:ATATAT,NC_000016.10:65322731:ATATATATAT:ATATATAT,NC_000016.10:65322731:ATATATATAT:ATATATATATAT
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATAT=0./0 (ALFA)
AT=0.00029/8 (GnomAD)
HGVS:: NC_000016.10:g.65322732AT[3], NC_000016.10:g.65322732AT[4], NC_000016.10:g.65322732AT[6], NC_000016.9:g.65356635AT[3], NC_000016.9:g.65356635AT[4], NC_000016.9:g.65356635AT[6], NG_052660.1:g.1170AT[3], NG_052660.1:g.1170AT[4], NG_052660.1:g.1170AT[6]

Select item 14915019267.

rs1491501926 has merged into rs1309197027 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATAT>-,AT,ATATAT,ATATATAT [Show Flanks]
Chromosome:: 16:65322841 (GRCh38)
16:65356744 (GRCh37)
Canonical SPDI:: NC_000016.10:65322838:ATATAT:AT,NC_000016.10:65322838:ATATAT:ATAT,NC_000016.10:65322838:ATATAT:ATATATAT,NC_000016.10:65322838:ATATAT:ATATATATAT
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AT=0./0 (ALFA)
AT=0.00146/12 (GnomAD)
HGVS:: NC_000016.10:g.65322839AT[1], NC_000016.10:g.65322839AT[2], NC_000016.10:g.65322839AT[4], NC_000016.10:g.65322839AT[5], NC_000016.9:g.65356742AT[1], NC_000016.9:g.65356742AT[2], NC_000016.9:g.65356742AT[4], NC_000016.9:g.65356742AT[5], NG_052660.1:g.1277AT[1], NG_052660.1:g.1277AT[2], NG_052660.1:g.1277AT[4], NG_052660.1:g.1277AT[5]

Select item 14914936598.

rs1491493659 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 16:65322806 (GRCh38)
16:65356710 (GRCh37)
Canonical SPDI:: NC_000016.10:65322806:T:TT
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
HGVS:: NC_000016.10:g.65322807dup, NC_000016.9:g.65356710dup, NG_052660.1:g.1245dup

Select item 14914930659.

rs1491493065 [Homo sapiens]

Variant type:: SNV:
Alleles:: CT>-
Chromosome:: no mapping
Canonical SPDI:

Select item 149148987710.

rs1491489877 [Homo sapiens]

Variant type:: DEL
Alleles:: TT>- [Show Flanks]
Chromosome:: 16:65322633 (GRCh38)
16:65356536 (GRCh37)
Canonical SPDI:: NC_000016.10:65322632:TT:
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.00014/10 (GnomAD)
HGVS:: NC_000016.10:g.65322633_65322634del, NC_000016.9:g.65356536_65356537del, NG_052660.1:g.1071_1072del

Select item 149147003111.

rs1491470031 [Homo sapiens]

Variant type:: INS
Alleles:: ->T [Show Flanks]
Chromosome:: 16:65323310 (GRCh38)
16:65357214 (GRCh37)
Canonical SPDI:: NC_000016.10:65323310::T
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: T=0.00014/9 (GnomAD)
HGVS:: NC_000016.10:g.65323310_65323311insT, NC_000016.9:g.65357213_65357214insT, NG_052660.1:g.1748_1749insT

Select item 149146555912.

rs1491465559 [Homo sapiens]

Variant type:: DEL
Alleles:: TT>- [Show Flanks]
Chromosome:: 16:65322479 (GRCh38)
16:65356382 (GRCh37)
Canonical SPDI:: NC_000016.10:65322478:TT:
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000016.10:g.65322479_65322480del, NC_000016.9:g.65356382_65356383del, NG_052660.1:g.917_918del

Select item 149146026013.

rs1491460260 has merged into rs1178818776 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATATAT>-,AT,ATAT,ATATATAT [Show Flanks]
Chromosome:: 16:65322773 (GRCh38)
16:65356676 (GRCh37)
Canonical SPDI:: NC_000016.10:65322768:ATATATATAT:ATAT,NC_000016.10:65322768:ATATATATAT:ATATAT,NC_000016.10:65322768:ATATATATAT:ATATATAT,NC_000016.10:65322768:ATATATATAT:ATATATATATAT
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATAT=0./0 (ALFA)
-=0.03571/40 (GnomAD)
HGVS:: NC_000016.10:g.65322769AT[2], NC_000016.10:g.65322769AT[3], NC_000016.10:g.65322769AT[4], NC_000016.10:g.65322769AT[6], NC_000016.9:g.65356672AT[2], NC_000016.9:g.65356672AT[3], NC_000016.9:g.65356672AT[4], NC_000016.9:g.65356672AT[6], NG_052660.1:g.1207AT[2], NG_052660.1:g.1207AT[3], NG_052660.1:g.1207AT[4], NG_052660.1:g.1207AT[6]

Select item 149145352414.

rs1491453524 [Homo sapiens]

Variant type:: DEL
Alleles:: AA>- [Show Flanks]
Chromosome:: 16:65323310 (GRCh38)
16:65357213 (GRCh37)
Canonical SPDI:: NC_000016.10:65323309:AA:
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.00002/2 (GnomAD)
HGVS:: NC_000016.10:g.65323310_65323311del, NC_000016.9:g.65357213_65357214del, NG_052660.1:g.1748_1749del

Select item 149145194015.

rs1491451940 [Homo sapiens]

Variant type:: DELINS
Alleles:: CC>- [Show Flanks]
Chromosome:: 16:65323819 (GRCh38)
16:65357722 (GRCh37)
Canonical SPDI:: NC_000016.10:65323817:CCC:C
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000084/1 (ALFA)
-=0.000156/21 (GnomAD)
-=0.001432/24 (TOMMO)
HGVS:: NC_000016.10:g.65323819_65323820del, NC_000016.9:g.65357722_65357723del, NG_052660.1:g.2257_2258del

Select item 149144246216.

rs1491442462 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 16:65322264 (GRCh38)
16:65356168 (GRCh37)
Canonical SPDI:: NC_000016.10:65322264:T:TT
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
T=0.00003/2 (GnomAD)
HGVS:: NC_000016.10:g.65322265dup, NC_000016.9:g.65356168dup, NG_052660.1:g.703dup

Select item 149144108017.

rs1491441080 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTT,T [Show Flanks]
Chromosome:: 16:65322769 (GRCh38)
16:65356673 (GRCh37)
Canonical SPDI:: NC_000016.10:65322769:T:TCTT,NC_000016.10:65322769:T:TT
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
T=0.00074/1 (GnomAD)
HGVS:: NC_000016.10:g.65322770_65322771insCTT, NC_000016.10:g.65322770dup, NC_000016.9:g.65356673_65356674insCTT, NC_000016.9:g.65356673dup, NG_052660.1:g.1208_1209insCTT, NG_052660.1:g.1208dup

Select item 149143303418.

rs1491433034 has merged into rs1169395212 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>-,ATAT [Show Flanks]
Chromosome:: 16:65323036 (GRCh38)
16:65356939 (GRCh37)
Canonical SPDI:: NC_000016.10:65323029:ATATATAT:ATATAT,NC_000016.10:65323029:ATATATAT:ATATATATAT
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATATAT=0./0 (ALFA)
-=0.00003/2 (GnomAD)
HGVS:: NC_000016.10:g.65323030AT[3], NC_000016.10:g.65323030AT[5], NC_000016.9:g.65356933AT[3], NC_000016.9:g.65356933AT[5], NG_052660.1:g.1468AT[3], NG_052660.1:g.1468AT[5]

Select item 149143165619.

rs1491431656 [Homo sapiens]

Variant type:: INS
Alleles:: ->T,TATAT,TATCT [Show Flanks]
Chromosome:: 16:65322971 (GRCh38)
16:65356875 (GRCh37)
Canonical SPDI:: NC_000016.10:65322971::T,NC_000016.10:65322971::TATAT,NC_000016.10:65322971::TATCT
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TATAT=0./0 (ALFA)
HGVS:: NC_000016.10:g.65322971_65322972insT, NC_000016.10:g.65322971_65322972insTATAT, NC_000016.10:g.65322971_65322972insTATCT, NC_000016.9:g.65356874_65356875insT, NC_000016.9:g.65356874_65356875insTATAT, NC_000016.9:g.65356874_65356875insTATCT, NG_052660.1:g.1409_1410insT, NG_052660.1:g.1409_1410insTATAT, NG_052660.1:g.1409_1410insTATCT

Select item 149142449520.

rs1491424495 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GT [Show Flanks]
Chromosome:: 16:65322889 (GRCh38)
16:65356793 (GRCh37)
Canonical SPDI:: NC_000016.10:65322889:T:TGT
Gene:: LINC00922 (Varview), LOC124903780 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TGT=0./0 (ALFA)
HGVS:: NC_000016.10:g.65322890_65322891insGT, NC_000016.9:g.65356793_65356794insGT, NG_052660.1:g.1328_1329insGT

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