SNP Links for Nucleotide (Select 133930778) - SNP

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Links from Nucleotide

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Select item 14870557891.

rs1487055789 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:107981945 (GRCh38)
X:107225175 (GRCh37)
Canonical SPDI:: NC_000023.11:107981944:G:A
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/2 (GnomAD_exomes)
A=0.000034/9 (TOPMED)
HGVS:: NC_000023.11:g.107981945G>A, NC_000023.10:g.107225175G>A, NG_002753.3:g.3147C>T, NG_015975.1:g.5426C>T, NM_031273.2:c.183C>T

Select item 14852271382.

rs1485227138 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:107982321 (GRCh38)
X:107225551 (GRCh37)
Canonical SPDI:: NC_000023.11:107982320:G:A
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.107982321G>A, NC_000023.10:g.107225551G>A, NG_002753.3:g.2771C>T, NG_015975.1:g.5050C>T, NM_031273.2:c.-44C>T

Select item 14819475103.

rs1481947510 [Homo sapiens]

Variant type:: DEL
Alleles:: GTTC>- [Show Flanks]
Chromosome:: X:107980959 (GRCh38)
X:107224189 (GRCh37)
Canonical SPDI:: NC_000023.11:107980958:GTTC:
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.107980959_107980962del, NC_000023.10:g.107224189_107224192del, NG_002753.3:g.4130_4133del, NG_015975.1:g.6409_6412del, NM_031273.2:c.*118_*121del

Select item 14759958944.

rs1475995894 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: X:107980928 (GRCh38)
X:107224158 (GRCh37)
Canonical SPDI:: NC_000023.11:107980927:A:C
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.107980928A>C, NC_000023.10:g.107224158A>C, NG_002753.3:g.4164T>G, NG_015975.1:g.6443T>G, NM_031273.2:c.*152T>G

Select item 14710375775.

rs1471037577 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:107981326 (GRCh38)
X:107224556 (GRCh37)
Canonical SPDI:: NC_000023.11:107981325:G:C
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: synonymous_variant,intron_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.107981326G>C, NC_000023.10:g.107224556G>C, NG_002753.3:g.3766C>G, NG_015975.1:g.6045C>G, NM_031273.2:c.693C>G

Select item 14659573386.

rs1465957338 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:107981669 (GRCh38)
X:107224899 (GRCh37)
Canonical SPDI:: NC_000023.11:107981668:G:A
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: synonymous_variant,intron_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000006/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.107981669G>A, NC_000023.10:g.107224899G>A, NG_002753.3:g.3423C>T, NG_015975.1:g.5702C>T, NM_031273.2:c.459C>T

Select item 14649160787.

rs1464916078 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:107982322 (GRCh38)
X:107225552 (GRCh37)
Canonical SPDI:: NC_000023.11:107982321:G:C
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000029/3 (GnomAD)
HGVS:: NC_000023.11:g.107982322G>C, NC_000023.10:g.107225552G>C, NG_002753.3:g.2770C>G, NG_015975.1:g.5049C>G, NM_031273.2:c.-45C>G

Select item 14643460138.

rs1464346013 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:107981748 (GRCh38)
X:107224978 (GRCh37)
Canonical SPDI:: NC_000023.11:107981747:A:G
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.107981748A>G, NC_000023.10:g.107224978A>G, NG_002753.3:g.3344T>C, NG_015975.1:g.5623T>C, NM_031273.2:c.380T>C, NP_112563.1:p.Phe127Ser

Select item 14627300389.

rs1462730038 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:107981941 (GRCh38)
X:107225171 (GRCh37)
Canonical SPDI:: NC_000023.11:107981940:C:T
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.107981941C>T, NC_000023.10:g.107225171C>T, NG_002753.3:g.3151G>A, NG_015975.1:g.5430G>A, NM_031273.2:c.187G>A, NP_112563.1:p.Val63Ile

Select item 146203818810.

rs1462038188 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: X:107982147 (GRCh38)
X:107225377 (GRCh37)
Canonical SPDI:: NC_000023.11:107982146:G:A,NC_000023.11:107982146:G:C
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: intron_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000044/1 (ALFA)
A=0.000013/2 (GnomAD_exomes)
A=0.000019/2 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000023.11:g.107982147G>A, NC_000023.11:g.107982147G>C, NC_000023.10:g.107225377G>A, NC_000023.10:g.107225377G>C, NG_002753.3:g.2945C>T, NG_002753.3:g.2945C>G, NG_015975.1:g.5224C>T, NG_015975.1:g.5224C>G, NM_031273.2:c.-20C>T, NM_031273.2:c.-20C>G

Select item 145394101911.

rs1453941019 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:107982090 (GRCh38)
X:107225320 (GRCh37)
Canonical SPDI:: NC_000023.11:107982089:C:T
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000019/2 (GnomAD)
HGVS:: NC_000023.11:g.107982090C>T, NC_000023.10:g.107225320C>T, NG_002753.3:g.3002G>A, NG_015975.1:g.5281G>A, NM_031273.2:c.38G>A, NP_112563.1:p.Arg13Gln

Select item 145333680012.

rs1453336800 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:107981466 (GRCh38)
X:107224696 (GRCh37)
Canonical SPDI:: NC_000023.11:107981465:C:T
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
HGVS:: NC_000023.11:g.107981466C>T, NC_000023.10:g.107224696C>T, NG_002753.3:g.3626G>A, NG_015975.1:g.5905G>A, NM_031273.2:c.553G>A, NP_112563.1:p.Glu185Lys

Select item 144926565113.

rs1449265651 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:107982044 (GRCh38)
X:107225274 (GRCh37)
Canonical SPDI:: NC_000023.11:107982043:G:A
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: A=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.107982044G>A, NC_000023.10:g.107225274G>A, NG_002753.3:g.3048C>T, NG_015975.1:g.5327C>T, NM_031273.2:c.84C>T

Select item 144335521814.

rs1443355218 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:107981262 (GRCh38)
X:107224492 (GRCh37)
Canonical SPDI:: NC_000023.11:107981261:G:A
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.107981262G>A, NC_000023.10:g.107224492G>A, NG_002753.3:g.3830C>T, NG_015975.1:g.6109C>T, NM_031273.2:c.757C>T, NP_112563.1:p.Leu253Phe

Select item 143855137315.

rs1438551373 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:107981927 (GRCh38)
X:107225157 (GRCh37)
Canonical SPDI:: NC_000023.11:107981926:G:A
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000023.11:g.107981927G>A, NC_000023.10:g.107225157G>A, NG_002753.3:g.3165C>T, NG_015975.1:g.5444C>T, NM_031273.2:c.201C>T

Select item 143799226216.

rs1437992262 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:107981424 (GRCh38)
X:107224654 (GRCh37)
Canonical SPDI:: NC_000023.11:107981423:C:T
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.107981424C>T, NC_000023.10:g.107224654C>T, NG_002753.3:g.3668G>A, NG_015975.1:g.5947G>A, NM_031273.2:c.595G>A, NP_112563.1:p.Gly199Arg

Select item 143301157917.

rs1433011579 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:107981098 (GRCh38)
X:107224328 (GRCh37)
Canonical SPDI:: NC_000023.11:107981097:A:G
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: synonymous_variant,intron_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.107981098A>G, NC_000023.10:g.107224328A>G, NG_002753.3:g.3994T>C, NG_015975.1:g.6273T>C, NM_031273.2:c.921T>C

Select item 143209870318.

rs1432098703 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:107981747 (GRCh38)
X:107224977 (GRCh37)
Canonical SPDI:: NC_000023.11:107981746:G:C
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.107981747G>C, NC_000023.10:g.107224977G>C, NG_002753.3:g.3345C>G, NG_015975.1:g.5624C>G, NM_031273.2:c.381C>G, NP_112563.1:p.Phe127Leu

Select item 142477064819.

rs1424770648 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:107981881 (GRCh38)
X:107225111 (GRCh37)
Canonical SPDI:: NC_000023.11:107981880:C:T
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.107981881C>T, NC_000023.10:g.107225111C>T, NG_002753.3:g.3211G>A, NG_015975.1:g.5490G>A, NM_031273.2:c.247G>A, NP_112563.1:p.Gly83Arg

Select item 142458694120.

rs1424586941 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:107981980 (GRCh38)
X:107225210 (GRCh37)
Canonical SPDI:: NC_000023.11:107981979:G:A
Gene:: TEX13B (Varview), LOC112267910 (Varview)
Functional Consequence:: missense_variant,intron_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.107981980G>A, NC_000023.10:g.107225210G>A, NG_002753.3:g.3112C>T, NG_015975.1:g.5391C>T, NM_031273.2:c.148C>T, NP_112563.1:p.Leu50Phe