SNP Links for Nucleotide (Select 182507160) - SNP - NCBI

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Links from Nucleotide

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Select item 14908695881.

rs1490869588 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 10:32911538 (GRCh38)
10:33200466 (GRCh37)
Canonical SPDI:: NC_000010.11:32911537:T:A
Gene:: ITGB1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.32911538T>A, NC_000010.10:g.33200466T>A, NG_029012.1:g.51828A>T, NM_002211.4:c.1841A>T, NM_002211.3:c.1841A>T, NM_133376.3:c.1841A>T, NM_133376.2:c.1841A>T, NM_033668.2:c.1841A>T, NM_033667.2:c.1841A>T, NM_033669.2:c.1841A>T, NM_033666.2:c.1841A>T, NM_033666.1:c.1841A>T, NM_033667.1:c.1841A>T, NM_033669.1:c.1841A>T, NP_002202.2:p.Glu614Val, NP_596867.1:p.Glu614Val, NP_391988.1:p.Glu614Val

Select item 14903529432.

rs1490352943 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:32910301 (GRCh38)
10:33199229 (GRCh37)
Canonical SPDI:: NC_000010.11:32910300:C:T
Gene:: ITGB1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000087/2 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000010.11:g.32910301C>T, NC_000010.10:g.33199229C>T, NG_029012.1:g.53065G>A, NM_002211.4:c.2086G>A, NM_002211.3:c.2086G>A, NM_133376.3:c.2086G>A, NM_133376.2:c.2086G>A, NM_033668.2:c.2086G>A, NM_033667.2:c.2086G>A, NM_033669.2:c.2086G>A, NM_033666.2:c.2086G>A, NM_033666.1:c.2086G>A, NM_033667.1:c.2086G>A, NM_033669.1:c.2086G>A, NP_002202.2:p.Val696Ile, NP_596867.1:p.Val696Ile, NP_391988.1:p.Val696Ile

Select item 14893207063.

rs1489320706 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:32900936 (GRCh38)
10:33189864 (GRCh37)
Canonical SPDI:: NC_000010.11:32900935:T:C
Gene:: ITGB1 (Varview), SNORA86 (Varview)
Functional Consequence:: 500B_downstream_variant,3_prime_UTR_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000010.11:g.32900936T>C, NC_000010.10:g.33189864T>C, NG_029012.1:g.62430A>G, NM_002211.4:c.*634A>G, NM_002211.3:c.*634A>G, NM_133376.3:c.*634A>G, NM_133376.2:c.*634A>G, NM_033668.2:c.*706A>G, NM_033667.2:c.*669A>G, NM_033669.2:c.*669A>G

Select item 14876910644.

rs1487691064 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:32912098 (GRCh38)
10:33201026 (GRCh37)
Canonical SPDI:: NC_000010.11:32912097:T:C
Gene:: ITGB1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: C=0.000047/1 (ALFA)
C=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000010.11:g.32912098T>C, NC_000010.10:g.33201026T>C, NG_029012.1:g.51268A>G, NM_002211.4:c.1496A>G, NM_002211.3:c.1496A>G, NM_133376.3:c.1496A>G, NM_133376.2:c.1496A>G, NM_033668.2:c.1496A>G, NM_033667.2:c.1496A>G, NM_033669.2:c.1496A>G, NM_033666.2:c.1496A>G, NM_033666.1:c.1496A>G, NM_033667.1:c.1496A>G, NM_033669.1:c.1496A>G, NP_002202.2:p.His499Arg, NP_596867.1:p.His499Arg, NP_391988.1:p.His499Arg

Select item 14861638275.

rs1486163827 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 10:32900912 (GRCh38)
10:33189840 (GRCh37)
Canonical SPDI:: NC_000010.11:32900911:A:T
Gene:: ITGB1 (Varview), SNORA86 (Varview)
Functional Consequence:: 3_prime_UTR_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.32900912A>T, NC_000010.10:g.33189840A>T, NG_029012.1:g.62454T>A, NM_002211.4:c.*658T>A, NM_002211.3:c.*658T>A, NM_133376.3:c.*658T>A, NM_133376.2:c.*658T>A, NM_033668.2:c.*730T>A, NM_033667.2:c.*693T>A, NM_033669.2:c.*693T>A

Select item 14854023986.

rs1485402398 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 10:32901028 (GRCh38)
10:33189956 (GRCh37)
Canonical SPDI:: NC_000010.11:32901027:G:A,NC_000010.11:32901027:G:T
Gene:: ITGB1 (Varview), SNORA86 (Varview)
Functional Consequence:: 3_prime_UTR_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0./0 (Korea1K)
T=0.000009/1 (GnomAD)
HGVS:: NC_000010.11:g.32901028G>A, NC_000010.11:g.32901028G>T, NC_000010.10:g.33189956G>A, NC_000010.10:g.33189956G>T, NG_029012.1:g.62338C>T, NG_029012.1:g.62338C>A, NM_002211.4:c.*542C>T, NM_002211.4:c.*542C>A, NM_002211.3:c.*542C>T, NM_002211.3:c.*542C>A, NM_133376.3:c.*542C>T, NM_133376.3:c.*542C>A, NM_133376.2:c.*542C>T, NM_133376.2:c.*542C>A, NM_033668.2:c.*614C>T, NM_033668.2:c.*614C>A, NM_033667.2:c.*577C>T, NM_033667.2:c.*577C>A, NM_033669.2:c.*577C>T, NM_033669.2:c.*577C>A

Select item 14824488257.

rs1482448825 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:32900965 (GRCh38)
10:33189893 (GRCh37)
Canonical SPDI:: NC_000010.11:32900964:T:C
Gene:: ITGB1 (Varview), SNORA86 (Varview)
Functional Consequence:: 3_prime_UTR_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000016/2 (GnomAD)
HGVS:: NC_000010.11:g.32900965T>C, NC_000010.10:g.33189893T>C, NG_029012.1:g.62401A>G, NM_002211.4:c.*605A>G, NM_002211.3:c.*605A>G, NM_133376.3:c.*605A>G, NM_133376.2:c.*605A>G, NM_033668.2:c.*677A>G, NM_033667.2:c.*640A>G, NM_033669.2:c.*640A>G

Select item 14821006558.

rs1482100655 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:32912079 (GRCh38)
10:33201007 (GRCh37)
Canonical SPDI:: NC_000010.11:32912078:A:G
Gene:: ITGB1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by cluster
MAF:: G=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000010.11:g.32912079A>G, NC_000010.10:g.33201007A>G, NG_029012.1:g.51287T>C, NM_002211.4:c.1515T>C, NM_002211.3:c.1515T>C, NM_133376.3:c.1515T>C, NM_133376.2:c.1515T>C, NM_033668.2:c.1515T>C, NM_033667.2:c.1515T>C, NM_033669.2:c.1515T>C, NM_033666.2:c.1515T>C, NM_033666.1:c.1515T>C, NM_033667.1:c.1515T>C, NM_033669.1:c.1515T>C

Select item 14817678899.

rs1481767889 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:32910330 (GRCh38)
10:33199258 (GRCh37)
Canonical SPDI:: NC_000010.11:32910329:T:C
Gene:: ITGB1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.32910330T>C, NC_000010.10:g.33199258T>C, NG_029012.1:g.53036A>G, NM_002211.4:c.2057A>G, NM_002211.3:c.2057A>G, NM_133376.3:c.2057A>G, NM_133376.2:c.2057A>G, NM_033668.2:c.2057A>G, NM_033667.2:c.2057A>G, NM_033669.2:c.2057A>G, NM_033666.2:c.2057A>G, NM_033666.1:c.2057A>G, NM_033667.1:c.2057A>G, NM_033669.1:c.2057A>G, NP_002202.2:p.Asp686Gly, NP_596867.1:p.Asp686Gly, NP_391988.1:p.Asp686Gly

Select item 148142422510.

rs1481424225 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:32907090 (GRCh38)
10:33196018 (GRCh37)
Canonical SPDI:: NC_000010.11:32907089:G:A
Gene:: ITGB1 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000016/4 (GnomAD_exomes)
A=0.000021/3 (GnomAD)
G=0.5/1 (SGDP_PRJ)
HGVS:: NC_000010.11:g.32907090G>A, NC_000010.10:g.33196018G>A, NG_029012.1:g.56276C>T, NM_033668.2:c.2385C>T

Select item 148130672711.

rs1481306727 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:32901181 (GRCh38)
10:33190109 (GRCh37)
Canonical SPDI:: NC_000010.11:32901180:T:C
Gene:: ITGB1 (Varview), SNORA86 (Varview)
Functional Consequence:: 3_prime_UTR_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.32901181T>C, NC_000010.10:g.33190109T>C, NG_029012.1:g.62185A>G, NM_002211.4:c.*389A>G, NM_002211.3:c.*389A>G, NM_133376.3:c.*389A>G, NM_133376.2:c.*389A>G, NM_033668.2:c.*461A>G, NM_033667.2:c.*424A>G, NM_033669.2:c.*424A>G

Select item 148057774012.

rs1480577740 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 10:32928250 (GRCh38)
10:33217178 (GRCh37)
Canonical SPDI:: NC_000010.11:32928249:A:T
Gene:: ITGB1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.32928250A>T, NC_000010.10:g.33217178A>T, NG_029012.1:g.35116T>A, NM_002211.4:c.391T>A, NM_002211.3:c.391T>A, NM_133376.3:c.391T>A, NM_133376.2:c.391T>A, NM_033668.2:c.391T>A, NM_033667.2:c.391T>A, NM_033669.2:c.391T>A, NM_033666.2:c.391T>A, NM_033666.1:c.391T>A, NM_033667.1:c.391T>A, NM_033669.1:c.391T>A, NP_002202.2:p.Phe131Ile, NP_596867.1:p.Phe131Ile, NP_391988.1:p.Phe131Ile

Select item 147969065913.

rs1479690659 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:32923647 (GRCh38)
10:33212575 (GRCh37)
Canonical SPDI:: NC_000010.11:32923646:C:T
Gene:: ITGB1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000010.11:g.32923647C>T, NC_000010.10:g.33212575C>T, NG_029012.1:g.39719G>A, NM_002211.4:c.880G>A, NM_002211.3:c.880G>A, NM_133376.3:c.880G>A, NM_133376.2:c.880G>A, NM_033668.2:c.880G>A, NM_033667.2:c.880G>A, NM_033669.2:c.880G>A, NM_033666.2:c.880G>A, NM_033666.1:c.880G>A, NM_033667.1:c.880G>A, NM_033669.1:c.880G>A, NP_002202.2:p.Val294Ile, NP_596867.1:p.Val294Ile, NP_391988.1:p.Val294Ile

Select item 147807378214.

rs1478073782 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:32900650 (GRCh38)
10:33189578 (GRCh37)
Canonical SPDI:: NC_000010.11:32900649:A:G
Gene:: ITGB1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/1 (GnomAD)
HGVS:: NC_000010.11:g.32900650A>G, NC_000010.10:g.33189578A>G, NG_029012.1:g.62716T>C, NM_002211.4:c.*920T>C, NM_002211.3:c.*920T>C, NM_133376.3:c.*920T>C, NM_133376.2:c.*920T>C, NM_033668.2:c.*992T>C, NM_033667.2:c.*955T>C, NM_033669.2:c.*955T>C

Select item 147780392515.

rs1477803925 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:32911979 (GRCh38)
10:33200907 (GRCh37)
Canonical SPDI:: NC_000010.11:32911978:T:C
Gene:: ITGB1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000010.11:g.32911979T>C, NC_000010.10:g.33200907T>C, NG_029012.1:g.51387A>G, NM_002211.4:c.1615A>G, NM_002211.3:c.1615A>G, NM_133376.3:c.1615A>G, NM_133376.2:c.1615A>G, NM_033668.2:c.1615A>G, NM_033667.2:c.1615A>G, NM_033669.2:c.1615A>G, NM_033666.2:c.1615A>G, NM_033666.1:c.1615A>G, NM_033667.1:c.1615A>G, NM_033669.1:c.1615A>G, NP_002202.2:p.Arg539Gly, NP_596867.1:p.Arg539Gly, NP_391988.1:p.Arg539Gly

Select item 147669171616.

rs1476691716 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 10:32908528 (GRCh38)
10:33197456 (GRCh37)
Canonical SPDI:: NC_000010.11:32908527:G:T
Gene:: ITGB1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000010.11:g.32908528G>T, NC_000010.10:g.33197456G>T, NG_029012.1:g.54838C>A, NM_002211.4:c.2171C>A, NM_002211.3:c.2171C>A, NM_133376.3:c.2171C>A, NM_133376.2:c.2171C>A, NM_033668.2:c.2171C>A, NM_033667.2:c.2171C>A, NM_033669.2:c.2171C>A, NM_033666.2:c.2171C>A, NM_033666.1:c.2171C>A, NM_033667.1:c.2171C>A, NM_033669.1:c.2171C>A, NP_002202.2:p.Pro724His, NP_596867.1:p.Pro724His, NP_391988.1:p.Pro724His

Select item 147637120817.

rs1476371208 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:32922710 (GRCh38)
10:33211638 (GRCh37)
Canonical SPDI:: NC_000010.11:32922709:A:G
Gene:: ITGB1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000010.11:g.32922710A>G, NC_000010.10:g.33211638A>G, NG_029012.1:g.40656T>C, NM_002211.4:c.968T>C, NM_002211.3:c.968T>C, NM_133376.3:c.968T>C, NM_133376.2:c.968T>C, NM_033668.2:c.968T>C, NM_033667.2:c.968T>C, NM_033669.2:c.968T>C, NM_033666.2:c.968T>C, NM_033666.1:c.968T>C, NM_033667.1:c.968T>C, NM_033669.1:c.968T>C, NP_002202.2:p.Val323Ala, NP_596867.1:p.Val323Ala, NP_391988.1:p.Val323Ala

Select item 147583536018.

rs1475835360 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAG>- [Show Flanks]
Chromosome:: 10:32900659 (GRCh38)
10:33189587 (GRCh37)
Canonical SPDI:: NC_000010.11:32900654:AAAGAAAAAG:AAAG
Gene:: ITGB1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: AAAG=0./0 (ALFA)
-=0.000017/2 (GnomAD)
HGVS:: NC_000010.11:g.32900659_32900664del, NC_000010.10:g.33189587_33189592del, NG_029012.1:g.62706_62711del, NM_002211.4:c.*910_*915del, NM_002211.3:c.*910_*915del, NM_133376.3:c.*910_*915del, NM_133376.2:c.*910_*915del, NM_033668.2:c.*982_*987del, NM_033667.2:c.*945_*950del, NM_033669.2:c.*945_*950del

Select item 147547020019.

rs1475470200 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:32923672 (GRCh38)
10:33212600 (GRCh37)
Canonical SPDI:: NC_000010.11:32923671:A:G
Gene:: ITGB1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000010.11:g.32923672A>G, NC_000010.10:g.33212600A>G, NG_029012.1:g.39694T>C, NM_002211.4:c.855T>C, NM_002211.3:c.855T>C, NM_133376.3:c.855T>C, NM_133376.2:c.855T>C, NM_033668.2:c.855T>C, NM_033667.2:c.855T>C, NM_033669.2:c.855T>C, NM_033666.2:c.855T>C, NM_033666.1:c.855T>C, NM_033667.1:c.855T>C, NM_033669.1:c.855T>C

Select item 147458957920.

rs1474589579 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 10:32908378 (GRCh38)
10:33197306 (GRCh37)
Canonical SPDI:: NC_000010.11:32908377:T:C,NC_000010.11:32908377:T:G
Gene:: ITGB1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.32908378T>C, NC_000010.11:g.32908378T>G, NC_000010.10:g.33197306T>C, NC_000010.10:g.33197306T>G, NG_029012.1:g.54988A>G, NG_029012.1:g.54988A>C, NM_002211.4:c.2321A>G, NM_002211.4:c.2321A>C, NM_002211.3:c.2321A>G, NM_002211.3:c.2321A>C, NM_133376.3:c.2321A>G, NM_133376.3:c.2321A>C, NM_133376.2:c.2321A>G, NM_133376.2:c.2321A>C, NM_033668.2:c.2321A>G, NM_033668.2:c.2321A>C, NM_033667.2:c.2321A>G, NM_033667.2:c.2321A>C, NM_033669.2:c.2321A>G, NM_033669.2:c.2321A>C, NM_033666.2:c.2321A>G, NM_033666.2:c.2321A>C, NM_033666.1:c.2321A>G, NM_033666.1:c.2321A>C, NM_033667.1:c.2321A>G, NM_033667.1:c.2321A>C, NM_033669.1:c.2321A>G, NM_033669.1:c.2321A>C, NP_002202.2:p.Lys774Arg, NP_002202.2:p.Lys774Thr, NP_596867.1:p.Lys774Arg, NP_596867.1:p.Lys774Thr, NP_391988.1:p.Lys774Arg, NP_391988.1:p.Lys774Thr

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SNP Links for Nucleotide (Select 182507160) (859)
SNP

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