SNP Links for Nucleotide (Select 209862752) - SNP

Warning: The NCBI web site requires JavaScript to function. more...

Links from Nucleotide

Items: 1 to 20 of 800

<< First< Prev

Page of 40

Next >Last >>

Select item 14909276681.

rs1490927668 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATT>- [Show Flanks]
Chromosome:: 11:130003594 (GRCh38)
11:129873489 (GRCh37)
Canonical SPDI:: NC_000011.10:130003590:ATTATT:ATT
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATTATT=0.000071/1 (ALFA)
-=0.000034/9 (TOPMED)
-=0.000036/5 (GnomAD)
HGVS:: NC_000011.10:g.130003591ATT[1], NC_000011.9:g.129873486ATT[1], NR_024233.1:n.968ATT[1], NM_001007543.1:c.*94ATT[1]

Select item 14907970272.

rs1490797027 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 11:130004671 (GRCh38)
11:129874566 (GRCh37)
Canonical SPDI:: NC_000011.10:130004670:GG:G
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.130004672del, NC_000011.9:g.129874567del, NR_024233.1:n.2049del, NM_001007543.1:c.*1027del

Select item 14902810523.

rs1490281052 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:130005059 (GRCh38)
11:129874954 (GRCh37)
Canonical SPDI:: NC_000011.10:130005058:C:T
Gene:: PRDM10-DT (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.130005059C>T, NC_000011.9:g.129874954C>T, NR_024233.1:n.2436C>T, NM_001007543.1:c.*1414C>T

Select item 14898373044.

rs1489837304 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:130003637 (GRCh38)
11:129873532 (GRCh37)
Canonical SPDI:: NC_000011.10:130003636:C:A
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00034/1 (KOREAN)
A=0.00055/1 (Korea1K)
HGVS:: NC_000011.10:g.130003637C>A, NC_000011.9:g.129873532C>A, NR_024233.1:n.1014C>A, NM_001007543.1:c.*140C>A

Select item 14898132205.

rs1489813220 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:130004536 (GRCh38)
11:129874431 (GRCh37)
Canonical SPDI:: NC_000011.10:130004535:G:A,NC_000011.10:130004535:G:C
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000021/3 (GnomAD)
HGVS:: NC_000011.10:g.130004536G>A, NC_000011.10:g.130004536G>C, NC_000011.9:g.129874431G>A, NC_000011.9:g.129874431G>C, NR_024233.1:n.1913G>A, NR_024233.1:n.1913G>C, NM_001007543.1:c.*891G>A, NM_001007543.1:c.*891G>C

Select item 14895063896.

rs1489506389 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:130003617 (GRCh38)
11:129873512 (GRCh37)
Canonical SPDI:: NC_000011.10:130003616:C:G
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.130003617C>G, NC_000011.9:g.129873512C>G, NR_024233.1:n.994C>G, NM_001007543.1:c.*120C>G

Select item 14885780267.

rs1488578026 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:130003266 (GRCh38)
11:129873161 (GRCh37)
Canonical SPDI:: NC_000011.10:130003265:C:T
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.130003266C>T, NC_000011.9:g.129873161C>T, NR_024233.1:n.643C>T, NM_001007543.1:c.213C>T

Select item 14875950548.

rs1487595054 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:130003517 (GRCh38)
11:129873412 (GRCh37)
Canonical SPDI:: NC_000011.10:130003516:G:C
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000023/6 (TOPMED)
HGVS:: NC_000011.10:g.130003517G>C, NC_000011.9:g.129873412G>C, NR_024233.1:n.894G>C, NM_001007543.1:c.*20G>C

Select item 14869801029.

rs1486980102 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:130004332 (GRCh38)
11:129874227 (GRCh37)
Canonical SPDI:: NC_000011.10:130004331:G:A,NC_000011.10:130004331:G:T
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.130004332G>A, NC_000011.10:g.130004332G>T, NC_000011.9:g.129874227G>A, NC_000011.9:g.129874227G>T, NR_024233.1:n.1709G>A, NR_024233.1:n.1709G>T

Select item 148611125210.

rs1486111252 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 11:130003238 (GRCh38)
11:129873133 (GRCh37)
Canonical SPDI:: NC_000011.10:130003237:G:C,NC_000011.10:130003237:G:T
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000016/2 (GnomAD_exomes)
HGVS:: NC_000011.10:g.130003238G>C, NC_000011.10:g.130003238G>T, NC_000011.9:g.129873133G>C, NC_000011.9:g.129873133G>T, NR_024233.1:n.615G>C, NR_024233.1:n.615G>T, NM_001007543.1:c.185G>C, NM_001007543.1:c.185G>T

Select item 148470566811.

rs1484705668 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:130003841 (GRCh38)
11:129873736 (GRCh37)
Canonical SPDI:: NC_000011.10:130003840:C:G,NC_000011.10:130003840:C:T
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.130003841C>G, NC_000011.10:g.130003841C>T, NC_000011.9:g.129873736C>G, NC_000011.9:g.129873736C>T, NR_024233.1:n.1218C>G, NR_024233.1:n.1218C>T, NM_001007543.1:c.*344C>G, NM_001007543.1:c.*344C>T

Select item 148433634912.

rs1484336349 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:130003361 (GRCh38)
11:129873256 (GRCh37)
Canonical SPDI:: NC_000011.10:130003360:C:G,NC_000011.10:130003360:C:T
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
T=0.00001/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.130003361C>G, NC_000011.10:g.130003361C>T, NC_000011.9:g.129873256C>G, NC_000011.9:g.129873256C>T, NR_024233.1:n.738C>G, NR_024233.1:n.738C>T, NM_001007543.1:c.308C>G, NM_001007543.1:c.308C>T

Select item 148138241613.

rs1481382416 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:130004770 (GRCh38)
11:129874665 (GRCh37)
Canonical SPDI:: NC_000011.10:130004769:G:A
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.130004770G>A, NC_000011.9:g.129874665G>A, NR_024233.1:n.2147G>A, NM_001007543.1:c.*1125G>A

Select item 148133247414.

rs1481332474 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:130003122 (GRCh38)
11:129873017 (GRCh37)
Canonical SPDI:: NC_000011.10:130003121:G:A,NC_000011.10:130003121:G:C
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000008/1 (GnomAD_exomes)
A=0.000156/1 (1000Genomes)
G=0.5/1 (SGDP_PRJ)
HGVS:: NC_000011.10:g.130003122G>A, NC_000011.10:g.130003122G>C, NC_000011.9:g.129873017G>A, NC_000011.9:g.129873017G>C, NR_024233.1:n.499G>A, NR_024233.1:n.499G>C, NM_001007543.1:c.69G>A, NM_001007543.1:c.69G>C

Select item 148107153415.

rs1481071534 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:130003091 (GRCh38)
11:129872986 (GRCh37)
Canonical SPDI:: NC_000011.10:130003090:G:C
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0./0 (GnomAD)
C=0.000008/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.130003091G>C, NC_000011.9:g.129872986G>C, NR_024233.1:n.468G>C, NM_001007543.1:c.38G>C

Select item 148100115416.

rs1481001154 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:130003370 (GRCh38)
11:129873265 (GRCh37)
Canonical SPDI:: NC_000011.10:130003369:T:C
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
HGVS:: NC_000011.10:g.130003370T>C, NC_000011.9:g.129873265T>C, NR_024233.1:n.747T>C, NM_001007543.1:c.317T>C

Select item 148090376017.

rs1480903760 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:130002663 (GRCh38)
11:129872558 (GRCh37)
Canonical SPDI:: NC_000011.10:130002662:G:C
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.130002663G>C, NC_000011.9:g.129872558G>C, NR_024233.1:n.40G>C, NM_001007543.1:c.-391G>C

Select item 148035070818.

rs1480350708 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAGGT>- [Show Flanks]
Chromosome:: 11:130005139 (GRCh38)
11:129875034 (GRCh37)
Canonical SPDI:: NC_000011.10:130005137:TGAGGT:T
Gene:: PRDM10-DT (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.130005139_130005143del, NC_000011.9:g.129875034_129875038del, NR_024233.1:n.2516_2520del, NM_001007543.1:c.*1494_*1498del

Select item 147956114519.

rs1479561145 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 11:130002660 (GRCh38)
11:129872555 (GRCh37)
Canonical SPDI:: NC_000011.10:130002659:C:G
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.130002660C>G, NC_000011.9:g.129872555C>G, NR_024233.1:n.37C>G, NM_001007543.1:c.-394C>G

Select item 147939986820.

rs1479399868 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:130003048 (GRCh38)
11:129872943 (GRCh37)
Canonical SPDI:: NC_000011.10:130003047:G:A
Gene:: PRDM10 (Varview), PRDM10-DT (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: A=0.000009/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.130003048G>A, NC_000011.9:g.129872943G>A, NR_024233.1:n.425G>A, NM_001007543.1:c.-6G>A