SNP Links for Nucleotide (Select 210032118) - SNP

Links from Nucleotide

Items: 1 to 20 of 371

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Select item 14897387651.

rs1489738765 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:45304930 (GRCh38)
1:45770602 (GRCh37)
Canonical SPDI:: NC_000001.11:45304929:C:T
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.45304930C>T, NC_000001.10:g.45770602C>T, NR_024270.1:n.1021C>T

Select item 14856137792.

rs1485613779 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:45304729 (GRCh38)
1:45770401 (GRCh37)
Canonical SPDI:: NC_000001.11:45304728:A:G
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.45304729A>G, NC_000001.10:g.45770401A>G, NR_024270.1:n.820A>G

Select item 14854006773.

rs1485400677 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:45304419 (GRCh38)
1:45770091 (GRCh37)
Canonical SPDI:: NC_000001.11:45304418:T:A
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.45304419T>A, NC_000001.10:g.45770091T>A, NR_024270.1:n.510T>A

Select item 14812554994.

rs1481255499 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:45304595 (GRCh38)
1:45770267 (GRCh37)
Canonical SPDI:: NC_000001.11:45304594:G:A
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.45304595G>A, NC_000001.10:g.45770267G>A, NR_024270.1:n.686G>A

Select item 14771602525.

rs1477160252 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:45303931 (GRCh38)
1:45769603 (GRCh37)
Canonical SPDI:: NC_000001.11:45303930:T:G
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.45303931T>G, NC_000001.10:g.45769603T>G, NR_024270.1:n.22T>G

Select item 14746956736.

rs1474695673 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 1:45304932 (GRCh38)
1:45770604 (GRCh37)
Canonical SPDI:: NC_000001.11:45304931:G:
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.45304932del, NC_000001.10:g.45770604del, NR_024270.1:n.1023del

Select item 14735396637.

rs1473539663 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:45305335 (GRCh38)
1:45771007 (GRCh37)
Canonical SPDI:: NC_000001.11:45305334:G:A
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.45305335G>A, NC_000001.10:g.45771007G>A, NR_024270.1:n.1426G>A

Select item 14728787898.

rs1472878789 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:45304013 (GRCh38)
1:45769685 (GRCh37)
Canonical SPDI:: NC_000001.11:45304012:C:T
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.45304013C>T, NC_000001.10:g.45769685C>T, NR_024270.1:n.104C>T

Select item 14718267199.

rs1471826719 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:45304287 (GRCh38)
1:45769959 (GRCh37)
Canonical SPDI:: NC_000001.11:45304286:G:A
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.45304287G>A, NC_000001.10:g.45769959G>A, NR_024270.1:n.378G>A

Select item 146671331110.

rs1466713311 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:45305477 (GRCh38)
1:45771149 (GRCh37)
Canonical SPDI:: NC_000001.11:45305476:G:A
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000001.11:g.45305477G>A, NC_000001.10:g.45771149G>A, NR_024270.1:n.1568G>A

Select item 146302158911.

rs1463021589 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:45304466 (GRCh38)
1:45770138 (GRCh37)
Canonical SPDI:: NC_000001.11:45304465:C:G
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.45304466C>G, NC_000001.10:g.45770138C>G, NR_024270.1:n.557C>G

Select item 145746806412.

rs1457468064 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:45304165 (GRCh38)
1:45769837 (GRCh37)
Canonical SPDI:: NC_000001.11:45304164:C:A
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.45304165C>A, NC_000001.10:g.45769837C>A, NR_024270.1:n.256C>A

Select item 145643488013.

rs1456434880 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:45305051 (GRCh38)
1:45770723 (GRCh37)
Canonical SPDI:: NC_000001.11:45305050:C:G
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.45305051C>G, NC_000001.10:g.45770723C>G, NR_024270.1:n.1142C>G

Select item 145535040314.

rs1455350403 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:45304704 (GRCh38)
1:45770376 (GRCh37)
Canonical SPDI:: NC_000001.11:45304703:G:T
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.45304704G>T, NC_000001.10:g.45770376G>T, NR_024270.1:n.795G>T

Select item 145326889915.

rs1453268899 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 1:45305273 (GRCh38)
1:45770945 (GRCh37)
Canonical SPDI:: NC_000001.11:45305272:GGG:GG
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
-=0.000014/2 (GnomAD)
-=0.000019/5 (TOPMED)
HGVS:: NC_000001.11:g.45305275del, NC_000001.10:g.45770947del, NR_024270.1:n.1366del

Select item 145260782716.

rs1452607827 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:45304947 (GRCh38)
1:45770619 (GRCh37)
Canonical SPDI:: NC_000001.11:45304946:A:G
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.45304947A>G, NC_000001.10:g.45770619A>G, NR_024270.1:n.1038A>G

Select item 145235003417.

rs1452350034 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:45304090 (GRCh38)
1:45769762 (GRCh37)
Canonical SPDI:: NC_000001.11:45304089:G:A
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000224/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000223/1 (Estonian)
HGVS:: NC_000001.11:g.45304090G>A, NC_000001.10:g.45769762G>A, NR_024270.1:n.181G>A

Select item 144558914918.

rs1445589149 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:45304826 (GRCh38)
1:45770498 (GRCh37)
Canonical SPDI:: NC_000001.11:45304825:G:T
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.45304826G>T, NC_000001.10:g.45770498G>T, NR_024270.1:n.917G>T

Select item 144543236819.

rs1445432368 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:45303982 (GRCh38)
1:45769654 (GRCh37)
Canonical SPDI:: NC_000001.11:45303981:C:A
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000001.11:g.45303982C>A, NC_000001.10:g.45769654C>A, NR_024270.1:n.73C>A

Select item 144395892820.

rs1443958928 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:45304107 (GRCh38)
1:45769779 (GRCh37)
Canonical SPDI:: NC_000001.11:45304106:C:T
Gene:: LINC01144 (Varview), LOC105378691 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.45304107C>T, NC_000001.10:g.45769779C>T, NR_024270.1:n.198C>T

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