SNP Links for Nucleotide (Select 213688349) - SNP

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Links from Nucleotide

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Select item 14894130871.

rs1489413087 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:2351989 (GRCh38)
1:2283428 (GRCh37)
Canonical SPDI:: NC_000001.11:2351988:A:G
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000001.11:g.2351989A>G, NC_000001.10:g.2283428A>G, NR_024489.1:n.673T>C, NM_001127577.1:c.-10T>C

Select item 14893813772.

rs1489381377 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:2351385 (GRCh38)
1:2282824 (GRCh37)
Canonical SPDI:: NC_000001.11:2351384:C:T
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.2351385C>T, NC_000001.10:g.2282824C>T, NR_024489.1:n.1277G>A, NM_001127577.1:c.595G>A

Select item 14884936503.

rs1488493650 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:2352042 (GRCh38)
1:2283481 (GRCh37)
Canonical SPDI:: NC_000001.11:2352041:G:A
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.2352042G>A, NC_000001.10:g.2283481G>A, NR_024489.1:n.620C>T, NM_001127577.1:c.-63C>T

Select item 14884321994.

rs1488432199 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:2351703 (GRCh38)
1:2283142 (GRCh37)
Canonical SPDI:: NC_000001.11:2351702:G:A,NC_000001.11:2351702:G:C
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0./0 (KOREAN)
C=0.00039/7 (TOMMO)
HGVS:: NC_000001.11:g.2351703G>A, NC_000001.11:g.2351703G>C, NC_000001.10:g.2283142G>A, NC_000001.10:g.2283142G>C, NR_024489.1:n.959C>T, NR_024489.1:n.959C>G, NM_001127577.1:c.277C>T, NM_001127577.1:c.277C>G

Select item 14882837565.

rs1488283756 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:2350816 (GRCh38)
1:2282255 (GRCh37)
Canonical SPDI:: NC_000001.11:2350815:G:A,NC_000001.11:2350815:G:C
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.2350816G>A, NC_000001.11:g.2350816G>C, NC_000001.10:g.2282255G>A, NC_000001.10:g.2282255G>C, NR_024489.1:n.1846C>T, NR_024489.1:n.1846C>G, NM_001127577.1:c.*537C>T, NM_001127577.1:c.*537C>G

Select item 14874471626.

rs1487447162 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:2351119 (GRCh38)
1:2282558 (GRCh37)
Canonical SPDI:: NC_000001.11:2351118:T:C
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000001.11:g.2351119T>C, NC_000001.10:g.2282558T>C, NR_024489.1:n.1543A>G, NM_001127577.1:c.*234A>G

Select item 14870202297.

rs1487020229 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 1:2350441 (GRCh38)
1:2281880 (GRCh37)
Canonical SPDI:: NC_000001.11:2350440:C:G,NC_000001.11:2350440:C:T
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.2350441C>G, NC_000001.11:g.2350441C>T, NC_000001.10:g.2281880C>G, NC_000001.10:g.2281880C>T, NR_024489.1:n.2221G>C, NR_024489.1:n.2221G>A, NM_001127577.1:c.*912G>C, NM_001127577.1:c.*912G>A

Select item 14856522338.

rs1485652233 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:2351660 (GRCh38)
1:2283099 (GRCh37)
Canonical SPDI:: NC_000001.11:2351659:G:A
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by cluster
HGVS:: NC_000001.11:g.2351660G>A, NC_000001.10:g.2283099G>A, NR_024489.1:n.1002C>T, NM_001127577.1:c.320C>T

Select item 14851206409.

rs1485120640 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:2351626 (GRCh38)
1:2283065 (GRCh37)
Canonical SPDI:: NC_000001.11:2351625:C:T
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.5/1 (SGDP_PRJ)
HGVS:: NC_000001.11:g.2351626C>T, NC_000001.10:g.2283065C>T, NR_024489.1:n.1036G>A, NM_001127577.1:c.354G>A

Select item 148503292010.

rs1485032920 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 1:2351453 (GRCh38)
1:2282892 (GRCh37)
Canonical SPDI:: NC_000001.11:2351452:C:A,NC_000001.11:2351452:C:G,NC_000001.11:2351452:C:T
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.2351453C>A, NC_000001.11:g.2351453C>G, NC_000001.11:g.2351453C>T, NC_000001.10:g.2282892C>A, NC_000001.10:g.2282892C>G, NC_000001.10:g.2282892C>T, NR_024489.1:n.1209G>T, NR_024489.1:n.1209G>C, NR_024489.1:n.1209G>A, NM_001127577.1:c.527G>T, NM_001127577.1:c.527G>C, NM_001127577.1:c.527G>A

Select item 148129539411.

rs1481295394 has merged into rs138909458 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>-,AA [Show Flanks]
Chromosome:: 1:2352189 (GRCh38)
1:2283628 (GRCh37)
Canonical SPDI:: NC_000001.11:2352188:AAAAAAAAAA:AAAAAAAAA,NC_000001.11:2352188:AAAAAAAAAA:AAAAAAAAAAA
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
-=0.000083/22 (TOPMED)
HGVS:: NC_000001.11:g.2352198del, NC_000001.11:g.2352198dup, NC_000001.10:g.2283637del, NC_000001.10:g.2283637dup, NR_024489.1:n.473del, NR_024489.1:n.473dup

Select item 147943770612.

rs1479437706 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:2352269 (GRCh38)
1:2283708 (GRCh37)
Canonical SPDI:: NC_000001.11:2352268:C:T
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.2352269C>T, NC_000001.10:g.2283708C>T, NR_024489.1:n.393G>A

Select item 147905161513.

rs1479051615 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:2351247 (GRCh38)
1:2282686 (GRCh37)
Canonical SPDI:: NC_000001.11:2351246:A:T
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000324/6 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000057/8 (GnomAD)
T=0.001116/5 (Estonian)
HGVS:: NC_000001.11:g.2351247A>T, NC_000001.10:g.2282686A>T, NR_024489.1:n.1415T>A, NM_001127577.1:c.*106T>A

Select item 147799970914.

rs1477999709 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:2351409 (GRCh38)
1:2282848 (GRCh37)
Canonical SPDI:: NC_000001.11:2351408:C:G
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.2351409C>G, NC_000001.10:g.2282848C>G, NR_024489.1:n.1253G>C, NM_001127577.1:c.571G>C

Select item 147581168315.

rs1475811683 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:2352589 (GRCh38)
1:2284028 (GRCh37)
Canonical SPDI:: NC_000001.11:2352588:G:A
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.2352589G>A, NC_000001.10:g.2284028G>A, NR_024489.1:n.73C>T

Select item 147520451616.

rs1475204516 [Homo sapiens]

Variant type:: DELINS
Alleles:: TAGG>- [Show Flanks]
Chromosome:: 1:2351046 (GRCh38)
1:2282485 (GRCh37)
Canonical SPDI:: NC_000001.11:2351043:GGTAGG:GG
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.2351046_2351049del, NC_000001.10:g.2282485_2282488del, NR_024489.1:n.1615_1618del, NM_001127577.1:c.*306_*309del

Select item 147483055917.

rs1474830559 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:2352205 (GRCh38)
1:2283644 (GRCh37)
Canonical SPDI:: NC_000001.11:2352204:G:A
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.2352205G>A, NC_000001.10:g.2283644G>A, NR_024489.1:n.457C>T

Select item 147474009518.

rs1474740095 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:2351949 (GRCh38)
1:2283388 (GRCh37)
Canonical SPDI:: NC_000001.11:2351948:T:C
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.2351949T>C, NC_000001.10:g.2283388T>C, NR_024489.1:n.713A>G, NM_001127577.1:c.31A>G

Select item 146981432119.

rs1469814321 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:2351816 (GRCh38)
1:2283255 (GRCh37)
Canonical SPDI:: NC_000001.11:2351815:T:C
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
C=0.000342/1 (KOREAN)
C=0.001092/2 (Korea1K)
C=0.006193/104 (TOMMO)
HGVS:: NC_000001.11:g.2351816T>C, NC_000001.10:g.2283255T>C, NR_024489.1:n.846A>G, NM_001127577.1:c.164A>G

Select item 146867435120.

rs1468674351 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:2350466 (GRCh38)
1:2281905 (GRCh37)
Canonical SPDI:: NC_000001.11:2350465:G:A,NC_000001.11:2350465:G:T
Gene:: MORN1 (Varview), LOC100129534 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00005/1 (ALFA)
T=0.00022/1 (Estonian)
HGVS:: NC_000001.11:g.2350466G>A, NC_000001.11:g.2350466G>T, NC_000001.10:g.2281905G>A, NC_000001.10:g.2281905G>T, NR_024489.1:n.2196C>T, NR_024489.1:n.2196C>A, NM_001127577.1:c.*887C>T, NM_001127577.1:c.*887C>A

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