SNP Links for Nucleotide (Select 223029477) - SNP

Links from Nucleotide

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Select item 14896824171.

rs1489682417 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 20:33210294 (GRCh38)
20:31798100 (GRCh37)
Canonical SPDI:: NC_000020.11:33210293:C:A,NC_000020.11:33210293:C:T
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.00006/1 (TOMMO)
HGVS:: NC_000020.11:g.33210294C>A, NC_000020.11:g.33210294C>T, NC_000020.10:g.31798100C>A, NC_000020.10:g.31798100C>T, NR_026760.1:n.1035C>A, NR_026760.1:n.1035C>T, NM_173859.1:c.*444C>A, NM_173859.1:c.*444C>T

Select item 14885036932.

rs1488503693 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:33210072 (GRCh38)
20:31797878 (GRCh37)
Canonical SPDI:: NC_000020.11:33210071:A:G
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000020.11:g.33210072A>G, NC_000020.10:g.31797878A>G, NR_026760.1:n.813A>G, NM_173859.1:c.*222A>G

Select item 14856717993.

rs1485671799 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 20:33199364 (GRCh38)
20:31787170 (GRCh37)
Canonical SPDI:: NC_000020.11:33199363:A:C
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000020.11:g.33199364A>C, NC_000020.10:g.31787170A>C, NR_026760.1:n.201A>C, NM_173859.1:c.150A>C

Select item 14785435354.

rs1478543535 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 20:33205859 (GRCh38)
20:31793665 (GRCh37)
Canonical SPDI:: NC_000020.11:33205858:C:G
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.33205859C>G, NC_000020.10:g.31793665C>G, NR_026760.1:n.674C>G, NM_173859.1:c.*83C>G

Select item 14779993795.

rs1477999379 [Homo sapiens]

Variant type:: DELINS
Alleles:: TCCTCTGCACA>- [Show Flanks]
Chromosome:: 20:33198263 (GRCh38)
20:31786069 (GRCh37)
Canonical SPDI:: NC_000020.11:33198260:CATCCTCTGCACA:CA
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CA=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000019/5 (TOPMED)
HGVS:: NC_000020.11:g.33198263_33198273del, NC_000020.10:g.31786069_31786079del, NR_026760.1:n.103_113del, NM_173859.1:c.52_62del

Select item 14746424786.

rs1474642478 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->AATGATAC
Chromosome:: no mapping
Canonical SPDI:

Select item 14715599487.

rs1471559948 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:33210439 (GRCh38)
20:31798245 (GRCh37)
Canonical SPDI:: NC_000020.11:33210438:G:A
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000020.11:g.33210439G>A, NC_000020.10:g.31798245G>A, NR_026760.1:n.1180G>A, NM_173859.1:c.*589G>A

Select item 14706536158.

rs1470653615 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 20:33205144 (GRCh38)
20:31792950 (GRCh37)
Canonical SPDI:: NC_000020.11:33205143:G:A,NC_000020.11:33205143:G:C
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000020.11:g.33205144G>A, NC_000020.11:g.33205144G>C, NC_000020.10:g.31792950G>A, NC_000020.10:g.31792950G>C, NR_026760.1:n.576G>A, NR_026760.1:n.576G>C, NM_173859.1:c.525G>A, NM_173859.1:c.525G>C

Select item 14669433219.

rs1466943321 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 20:33201596 (GRCh38)
20:31789402 (GRCh37)
Canonical SPDI:: NC_000020.11:33201595:G:A,NC_000020.11:33201595:G:T
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000021/3 (GnomAD)
T=0.000034/9 (TOPMED)
HGVS:: NC_000020.11:g.33201596G>A, NC_000020.11:g.33201596G>T, NC_000020.10:g.31789402G>A, NC_000020.10:g.31789402G>T, NR_026760.1:n.364G>A, NR_026760.1:n.364G>T, NM_173859.1:c.313G>A, NM_173859.1:c.313G>T

Select item 146466907810.

rs1464669078 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:33202577 (GRCh38)
20:31790383 (GRCh37)
Canonical SPDI:: NC_000020.11:33202576:A:G
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.33202577A>G, NC_000020.10:g.31790383A>G, NR_026760.1:n.470A>G, NM_173859.1:c.419A>G

Select item 146362291011.

rs1463622910 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 20:33207738 (GRCh38)
20:31795544 (GRCh37)
Canonical SPDI:: NC_000020.11:33207737:C:
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000020.11:g.33207738del, NC_000020.10:g.31795544del, NR_026760.1:n.737del, NM_173859.1:c.*146del

Select item 146212514712.

rs1462125147 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 20:33207764 (GRCh38)
20:31795570 (GRCh37)
Canonical SPDI:: NC_000020.11:33207763:A:C
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.33207764A>C, NC_000020.10:g.31795570A>C, NR_026760.1:n.763A>C, NM_173859.1:c.*172A>C

Select item 146170926513.

rs1461709265 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:33198243 (GRCh38)
20:31786049 (GRCh37)
Canonical SPDI:: NC_000020.11:33198242:T:C
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.33198243T>C, NC_000020.10:g.31786049T>C, NR_026760.1:n.83T>C, NM_173859.1:c.32T>C

Select item 145922829314.

rs1459228293 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 20:33202528 (GRCh38)
20:31790334 (GRCh37)
Canonical SPDI:: NC_000020.11:33202527:C:A
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000020.11:g.33202528C>A, NC_000020.10:g.31790334C>A, NR_026760.1:n.421C>A, NM_173859.1:c.370C>A

Select item 145859511215.

rs1458595112 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:33210177 (GRCh38)
20:31797983 (GRCh37)
Canonical SPDI:: NC_000020.11:33210176:C:T
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.33210177C>T, NC_000020.10:g.31797983C>T, NR_026760.1:n.918C>T, NM_173859.1:c.*327C>T

Select item 145677621316.

rs1456776213 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:33210161 (GRCh38)
20:31797967 (GRCh37)
Canonical SPDI:: NC_000020.11:33210160:A:G
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
G=0.000312/2 (1000Genomes)
HGVS:: NC_000020.11:g.33210161A>G, NC_000020.10:g.31797967A>G, NR_026760.1:n.902A>G, NM_173859.1:c.*311A>G

Select item 145385439217.

rs1453854392 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 20:33205126 (GRCh38)
20:31792932 (GRCh37)
Canonical SPDI:: NC_000020.11:33205125:C:A,NC_000020.11:33205125:C:T
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
A=0.000142/2 (TOMMO)
HGVS:: NC_000020.11:g.33205126C>A, NC_000020.11:g.33205126C>T, NC_000020.10:g.31792932C>A, NC_000020.10:g.31792932C>T, NR_026760.1:n.558C>A, NR_026760.1:n.558C>T, NM_173859.1:c.507C>A, NM_173859.1:c.507C>T

Select item 145288070018.

rs1452880700 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 20:33210317 (GRCh38)
20:31798123 (GRCh37)
Canonical SPDI:: NC_000020.11:33210316:G:A,NC_000020.11:33210316:G:T
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.33210317G>A, NC_000020.11:g.33210317G>T, NC_000020.10:g.31798123G>A, NC_000020.10:g.31798123G>T, NR_026760.1:n.1058G>A, NR_026760.1:n.1058G>T, NM_173859.1:c.*467G>A, NM_173859.1:c.*467G>T

Select item 145188458219.

rs1451884582 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 20:33207723 (GRCh38)
20:31795529 (GRCh37)
Canonical SPDI:: NC_000020.11:33207722:G:A,NC_000020.11:33207722:G:C
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
A=0.000035/1 (TOMMO)
HGVS:: NC_000020.11:g.33207723G>A, NC_000020.11:g.33207723G>C, NC_000020.10:g.31795529G>A, NC_000020.10:g.31795529G>C, NR_026760.1:n.722G>A, NR_026760.1:n.722G>C, NM_173859.1:c.*131G>A, NM_173859.1:c.*131G>C

Select item 144832071820.

rs1448320718 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 20:33210307 (GRCh38)
20:31798113 (GRCh37)
Canonical SPDI:: NC_000020.11:33210306:G:C
Gene:: BPIFA4P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000020.11:g.33210307G>C, NC_000020.10:g.31798113G>C, NR_026760.1:n.1048G>C, NM_173859.1:c.*457G>C

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