SNP Links for Nucleotide (Select 224451099) - SNP

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Links from Nucleotide

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Select item 14903333221.

rs1490333322 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 6:113920686 (GRCh38)
6:114241850 (GRCh37)
Canonical SPDI:: NC_000006.12:113920685:G:C,NC_000006.12:113920685:G:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.113920686G>C, NC_000006.12:g.113920686G>T, NC_000006.11:g.114241850G>C, NC_000006.11:g.114241850G>T, NM_173673.1:c.*511G>C, NM_173673.1:c.*511G>T, NM_001039528.1:c.*511G>C, NM_001039528.1:c.*511G>T, NR_027060.1:n.1050G>C, NR_027060.1:n.1050G>T

Select item 14893817292.

rs1489381729 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:113919270 (GRCh38)
6:114240434 (GRCh37)
Canonical SPDI:: NC_000006.12:113919269:C:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0./0 (KOREAN)
T=0.000007/1 (GnomAD)
T=0.000156/1 (1000Genomes)
HGVS:: NC_000006.12:g.113919270C>T, NC_000006.11:g.114240434C>T, NM_173673.1:c.*93C>T, NM_001039528.1:c.*93C>T, NR_027060.1:n.632C>T

Select item 14887795343.

rs1488779534 [Homo sapiens]

Variant type:: DEL
Alleles:: T>- [Show Flanks]
Chromosome:: 6:113904441 (GRCh38)
6:114225605 (GRCh37)
Canonical SPDI:: NC_000006.12:113904440:T:
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.113904441del, NC_000006.11:g.114225605del, NM_173673.1:c.2del, NM_001039528.1:c.2del, NR_027060.1:n.55del

Select item 14871626334.

rs1487162633 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:113920813 (GRCh38)
6:114241977 (GRCh37)
Canonical SPDI:: NC_000006.12:113920812:G:A
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.113920813G>A, NC_000006.11:g.114241977G>A, NM_173673.1:c.*638G>A, NM_001039528.1:c.*638G>A, NR_027060.1:n.1177G>A

Select item 14868162065.

rs1486816206 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 6:113921457 (GRCh38)
6:114242621 (GRCh37)
Canonical SPDI:: NC_000006.12:113921456:C:A,NC_000006.12:113921456:C:G,NC_000006.12:113921456:C:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
T=0./0 (KOREAN)
A=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.113921457C>A, NC_000006.12:g.113921457C>G, NC_000006.12:g.113921457C>T, NC_000006.11:g.114242621C>A, NC_000006.11:g.114242621C>G, NC_000006.11:g.114242621C>T, NM_173673.1:c.*1282C>A, NM_173673.1:c.*1282C>G, NM_173673.1:c.*1282C>T, NM_001039528.1:c.*1282C>A, NM_001039528.1:c.*1282C>G, NM_001039528.1:c.*1282C>T, NR_027060.1:n.1821C>A, NR_027060.1:n.1821C>G, NR_027060.1:n.1821C>T

Select item 14865452986.

rs1486545298 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 6:113921027 (GRCh38)
6:114242191 (GRCh37)
Canonical SPDI:: NC_000006.12:113921026:G:C,NC_000006.12:113921026:G:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.113921027G>C, NC_000006.12:g.113921027G>T, NC_000006.11:g.114242191G>C, NC_000006.11:g.114242191G>T, NM_173673.1:c.*852G>C, NM_173673.1:c.*852G>T, NM_001039528.1:c.*852G>C, NM_001039528.1:c.*852G>T, NR_027060.1:n.1391G>C, NR_027060.1:n.1391G>T

Select item 14846379017.

rs1484637901 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:113921252 (GRCh38)
6:114242416 (GRCh37)
Canonical SPDI:: NC_000006.12:113921251:C:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.113921252C>T, NC_000006.11:g.114242416C>T, NM_173673.1:c.*1077C>T, NM_001039528.1:c.*1077C>T, NR_027060.1:n.1616C>T

Select item 14822174208.

rs1482217420 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:113920507 (GRCh38)
6:114241671 (GRCh37)
Canonical SPDI:: NC_000006.12:113920506:C:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.113920507C>T, NC_000006.11:g.114241671C>T, NM_173673.1:c.*332C>T, NM_001039528.1:c.*332C>T, NR_027060.1:n.871C>T

Select item 14820748299.

rs1482074829 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:113919438 (GRCh38)
6:114240602 (GRCh37)
Canonical SPDI:: NC_000006.12:113919437:C:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.113919438C>T, NC_000006.11:g.114240602C>T, NM_173673.1:c.*261C>T, NM_001039528.1:c.*261C>T, NR_027060.1:n.800C>T

Select item 148086966510.

rs1480869665 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:113921531 (GRCh38)
6:114242695 (GRCh37)
Canonical SPDI:: NC_000006.12:113921530:C:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000006.12:g.113921531C>T, NC_000006.11:g.114242695C>T, NM_173673.1:c.*1356C>T, NM_001039528.1:c.*1356C>T, NR_027060.1:n.1895C>T

Select item 148053500311.

rs1480535003 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 6:113904718 (GRCh38)
6:114225882 (GRCh37)
Canonical SPDI:: NC_000006.12:113904717:C:A,NC_000006.12:113904717:C:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000006.12:g.113904718C>A, NC_000006.12:g.113904718C>T, NC_000006.11:g.114225882C>A, NC_000006.11:g.114225882C>T, NM_173673.1:c.279C>A, NM_173673.1:c.279C>T, NM_001039528.1:c.279C>A, NM_001039528.1:c.279C>T, NR_027060.1:n.332C>A, NR_027060.1:n.332C>T

Select item 148045525112.

rs1480455251 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 6:113920496 (GRCh38)
6:114241660 (GRCh37)
Canonical SPDI:: NC_000006.12:113920495:C:A,NC_000006.12:113920495:C:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
T=0.000142/2 (TOMMO)
HGVS:: NC_000006.12:g.113920496C>A, NC_000006.12:g.113920496C>T, NC_000006.11:g.114241660C>A, NC_000006.11:g.114241660C>T, NM_173673.1:c.*321C>A, NM_173673.1:c.*321C>T, NM_001039528.1:c.*321C>A, NM_001039528.1:c.*321C>T, NR_027060.1:n.860C>A, NR_027060.1:n.860C>T

Select item 148001685413.

rs1480016854 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:113904431 (GRCh38)
6:114225595 (GRCh37)
Canonical SPDI:: NC_000006.12:113904430:C:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.113904431C>T, NC_000006.11:g.114225595C>T, NM_173673.1:c.-9C>T, NM_001039528.1:c.-9C>T, NR_027060.1:n.45C>T

Select item 147855107314.

rs1478551073 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:113920761 (GRCh38)
6:114241925 (GRCh37)
Canonical SPDI:: NC_000006.12:113920760:A:G
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.113920761A>G, NC_000006.11:g.114241925A>G, NM_173673.1:c.*586A>G, NM_001039528.1:c.*586A>G, NR_027060.1:n.1125A>G

Select item 147760095715.

rs1477600957 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:113916967 (GRCh38)
6:114238131 (GRCh37)
Canonical SPDI:: NC_000006.12:113916966:G:A
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.113916967G>A, NC_000006.11:g.114238131G>A, NM_173673.1:c.330G>A, NM_001039528.1:c.330G>A, NR_027060.1:n.383G>A

Select item 147623431516.

rs1476234315 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:113921557 (GRCh38)
6:114242721 (GRCh37)
Canonical SPDI:: NC_000006.12:113921556:T:C
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.113921557T>C, NC_000006.11:g.114242721T>C, NM_173673.1:c.*1382T>C, NM_001039528.1:c.*1382T>C, NR_027060.1:n.1921T>C

Select item 147620655817.

rs1476206558 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:113920482 (GRCh38)
6:114241646 (GRCh37)
Canonical SPDI:: NC_000006.12:113920481:G:A
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000006.12:g.113920482G>A, NC_000006.11:g.114241646G>A, NM_173673.1:c.*307G>A, NM_001039528.1:c.*307G>A, NR_027060.1:n.846G>A

Select item 147373559118.

rs1473735591 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 6:113919414 (GRCh38)
6:114240578 (GRCh37)
Canonical SPDI:: NC_000006.12:113919413:G:C,NC_000006.12:113919413:G:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.113919414G>C, NC_000006.12:g.113919414G>T, NC_000006.11:g.114240578G>C, NC_000006.11:g.114240578G>T, NM_173673.1:c.*237G>C, NM_173673.1:c.*237G>T, NM_001039528.1:c.*237G>C, NM_001039528.1:c.*237G>T, NR_027060.1:n.776G>C, NR_027060.1:n.776G>T

Select item 147215386119.

rs1472153861 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:113920942 (GRCh38)
6:114242106 (GRCh37)
Canonical SPDI:: NC_000006.12:113920941:G:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.113920942G>T, NC_000006.11:g.114242106G>T, NM_173673.1:c.*767G>T, NM_001039528.1:c.*767G>T, NR_027060.1:n.1306G>T

Select item 146894985420.

rs1468949854 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:113920774 (GRCh38)
6:114241938 (GRCh37)
Canonical SPDI:: NC_000006.12:113920773:C:T
Gene:: LINC02880 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000006.12:g.113920774C>T, NC_000006.11:g.114241938C>T, NM_173673.1:c.*599C>T, NM_001039528.1:c.*599C>T, NR_027060.1:n.1138C>T

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