SNP Links for Nucleotide (Select 22546008) - SNP

Links from Nucleotide

Items: 1 to 20 of 62

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Select item 14640132511.

rs1464013251 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:75400461 (GRCh38)
11:75111505 (GRCh37)
Canonical SPDI:: NC_000011.10:75400460:G:C
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000019/5 (TOPMED)
HGVS:: NC_000011.10:g.75400461G>C, NC_000011.9:g.75111505G>C, NR_000005.1:n.71G>C

Select item 14617602212.

rs1461760221 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:75400522 (GRCh38)
11:75111566 (GRCh37)
Canonical SPDI:: NC_000011.10:75400521:G:A,NC_000011.10:75400521:G:T
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.75400522G>A, NC_000011.10:g.75400522G>T, NC_000011.9:g.75111566G>A, NC_000011.9:g.75111566G>T, NR_000005.1:n.132G>A, NR_000005.1:n.132G>T

Select item 14395036343.

rs1439503634 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:75400434 (GRCh38)
11:75111478 (GRCh37)
Canonical SPDI:: NC_000011.10:75400433:C:T
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.75400434C>T, NC_000011.9:g.75111478C>T, NR_000005.1:n.44C>T

Select item 14320058344.

rs1432005834 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:75400407 (GRCh38)
11:75111451 (GRCh37)
Canonical SPDI:: NC_000011.10:75400406:A:G
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.75400407A>G, NC_000011.9:g.75111451A>G, NR_000005.1:n.17A>G

Select item 14253309315.

rs1425330931 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:75400406 (GRCh38)
11:75111450 (GRCh37)
Canonical SPDI:: NC_000011.10:75400405:G:A
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: A=0.000009/2 (GnomAD_exomes)
HGVS:: NC_000011.10:g.75400406G>A, NC_000011.9:g.75111450G>A, NR_000005.1:n.16G>A

Select item 14218056366.

rs1421805636 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:75400481 (GRCh38)
11:75111525 (GRCh37)
Canonical SPDI:: NC_000011.10:75400480:A:T
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.75400481A>T, NC_000011.9:g.75111525A>T, NR_000005.1:n.91A>T

Select item 14019827457.

rs1401982745 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 11:75400486 (GRCh38)
11:75111530 (GRCh37)
Canonical SPDI:: NC_000011.10:75400485:C:A,NC_000011.10:75400485:C:T
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000011.10:g.75400486C>A, NC_000011.10:g.75400486C>T, NC_000011.9:g.75111530C>A, NC_000011.9:g.75111530C>T, NR_000005.1:n.96C>A, NR_000005.1:n.96C>T

Select item 13945928498.

rs1394592849 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:75400487 (GRCh38)
11:75111531 (GRCh37)
Canonical SPDI:: NC_000011.10:75400486:C:T
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: T=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000011.10:g.75400487C>T, NC_000011.9:g.75111531C>T, NR_000005.1:n.97C>T

Select item 13924465319.

rs1392446531 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:75400518 (GRCh38)
11:75111562 (GRCh37)
Canonical SPDI:: NC_000011.10:75400517:A:G
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.75400518A>G, NC_000011.9:g.75111562A>G, NR_000005.1:n.128A>G

Select item 138426782310.

rs1384267823 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:75400496 (GRCh38)
11:75111540 (GRCh37)
Canonical SPDI:: NC_000011.10:75400495:A:G
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.75400496A>G, NC_000011.9:g.75111540A>G, NR_000005.1:n.106A>G

Select item 137859150011.

rs1378591500 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:75400530 (GRCh38)
11:75111574 (GRCh37)
Canonical SPDI:: NC_000011.10:75400529:C:T
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.75400530C>T, NC_000011.9:g.75111574C>T, NR_000005.1:n.140C>T

Select item 133844723712.

rs1338447237 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 11:75400414 (GRCh38)
11:75111458 (GRCh37)
Canonical SPDI:: NC_000011.10:75400413:G:C,NC_000011.10:75400413:G:T
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.75400414G>C, NC_000011.10:g.75400414G>T, NC_000011.9:g.75111458G>C, NC_000011.9:g.75111458G>T, NR_000005.1:n.24G>C, NR_000005.1:n.24G>T

Select item 131853953013.

rs1318539530 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:75400422 (GRCh38)
11:75111466 (GRCh37)
Canonical SPDI:: NC_000011.10:75400421:T:C
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.75400422T>C, NC_000011.9:g.75111466T>C, NR_000005.1:n.32T>C

Select item 129783732614.

rs1297837326 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:75400409 (GRCh38)
11:75111453 (GRCh37)
Canonical SPDI:: NC_000011.10:75400408:G:A
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: A=0.000009/2 (GnomAD_exomes)
HGVS:: NC_000011.10:g.75400409G>A, NC_000011.9:g.75111453G>A, NR_000005.1:n.19G>A

Select item 129307587815.

rs1293075878 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 11:75400460 (GRCh38)
11:75111504 (GRCh37)
Canonical SPDI:: NC_000011.10:75400459:T:A,NC_000011.10:75400459:T:G
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000011.10:g.75400460T>A, NC_000011.10:g.75400460T>G, NC_000011.9:g.75111504T>A, NC_000011.9:g.75111504T>G, NR_000005.1:n.70T>A, NR_000005.1:n.70T>G

Select item 128963692516.

rs1289636925 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:75400485 (GRCh38)
11:75111529 (GRCh37)
Canonical SPDI:: NC_000011.10:75400484:G:A,NC_000011.10:75400484:G:T
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000029/4 (GnomAD)
T=0.00003/8 (TOPMED)
HGVS:: NC_000011.10:g.75400485G>A, NC_000011.10:g.75400485G>T, NC_000011.9:g.75111529G>A, NC_000011.9:g.75111529G>T, NR_000005.1:n.95G>A, NR_000005.1:n.95G>T

Select item 128467991417.

rs1284679914 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:75400442 (GRCh38)
11:75111486 (GRCh37)
Canonical SPDI:: NC_000011.10:75400441:A:G
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.75400442A>G, NC_000011.9:g.75111486A>G, NR_000005.1:n.52A>G

Select item 126941349918.

rs1269413499 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:75400391 (GRCh38)
11:75111435 (GRCh37)
Canonical SPDI:: NC_000011.10:75400390:C:T
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000035/1 (TOMMO)
HGVS:: NC_000011.10:g.75400391C>T, NC_000011.9:g.75111435C>T, NR_000005.1:n.1C>T

Select item 126221344519.

rs1262213445 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:75400458 (GRCh38)
11:75111502 (GRCh37)
Canonical SPDI:: NC_000011.10:75400457:G:A
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
HGVS:: NC_000011.10:g.75400458G>A, NC_000011.9:g.75111502G>A, NR_000005.1:n.68G>A

Select item 124656692720.

rs1246566927 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TGA [Show Flanks]
Chromosome:: 11:75400402 (GRCh38)
11:75111447 (GRCh37)
Canonical SPDI:: NC_000011.10:75400402:GATGATGA:GATGATGATGA
Gene:: SNORD15A (Varview), RPS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: GATGATGATGA=0.000071/1 (ALFA)
GAT=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.75400405TGA[3], NC_000011.9:g.75111449TGA[3], NR_000005.1:n.15TGA[3]

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