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Links from Nucleotide

Items: 1 to 20 of 386

1.

rs1489532470 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    A>C [Show Flanks]
    Chromosome:
    4:140381759 (GRCh38)
    4:141302913 (GRCh37)
    Canonical SPDI:
    NC_000004.12:140381758:A:C
    Gene:
    SCOC (Varview)
    Functional Consequence:
    3_prime_UTR_variant
    Validated:
    by frequency,by alfa
    MAF:
    C=0.000071/1 (ALFA)
    C=0.000004/1 (TOPMED)
    HGVS:
    2.

    rs1489114781 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      C>G,T [Show Flanks]
      Chromosome:
      4:140343599 (GRCh38)
      4:141264753 (GRCh37)
      Canonical SPDI:
      NC_000004.12:140343598:C:G,NC_000004.12:140343598:C:T
      Gene:
      SCOC (Varview), SCOC-AS1 (Varview)
      Functional Consequence:
      intron_variant,genic_upstream_transcript_variant,5_prime_UTR_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      T=0./0 (ALFA)
      G=0.000004/1 (GnomAD_exomes)
      T=0.000004/1 (TOPMED)
      HGVS:
      3.

      rs1483662036 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        A>T [Show Flanks]
        Chromosome:
        4:140382083 (GRCh38)
        4:141303237 (GRCh37)
        Canonical SPDI:
        NC_000004.12:140382082:A:T
        Gene:
        SCOC (Varview)
        Functional Consequence:
        3_prime_UTR_variant
        Validated:
        by frequency,by alfa
        MAF:
        T=0./0 (ALFA)
        T=0.000007/1 (GnomAD)
        HGVS:
        4.

        rs1475869586 [Homo sapiens]
          Variant type:
          DELINS
          Alleles:
          ->A [Show Flanks]
          Chromosome:
          4:140381549 (GRCh38)
          4:141302704 (GRCh37)
          Canonical SPDI:
          NC_000004.12:140381549:AAAAAAA:AAAAAAAA
          Gene:
          SCOC (Varview)
          Functional Consequence:
          3_prime_UTR_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          AAAAAAAA=0./0 (ALFA)
          A=0.000021/3 (GnomAD)
          A=0.000023/6 (TOPMED)
          HGVS:
          7.

          rs1473228433 [Homo sapiens]
            Variant type:
            DELINS
            Alleles:
            A>- [Show Flanks]
            Chromosome:
            4:140381738 (GRCh38)
            4:141302892 (GRCh37)
            Canonical SPDI:
            NC_000004.12:140381737:AAAAA:AAAA
            Gene:
            SCOC (Varview)
            Functional Consequence:
            3_prime_UTR_variant
            Validated:
            by frequency,by alfa
            MAF:
            AAAA=0./0 (ALFA)
            -=0.000007/1 (GnomAD)
            HGVS:
            9.

            rs1468431374 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              A>C [Show Flanks]
              Chromosome:
              4:140381555 (GRCh38)
              4:141302709 (GRCh37)
              Canonical SPDI:
              NC_000004.12:140381554:A:C
              Gene:
              SCOC (Varview)
              Functional Consequence:
              3_prime_UTR_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              C=0./0 (ALFA)
              C=0.000004/1 (TOPMED)
              C=0.000007/1 (GnomAD)
              HGVS:
              10.

              rs1466857260 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                A>G [Show Flanks]
                Chromosome:
                4:140381204 (GRCh38)
                4:141302358 (GRCh37)
                Canonical SPDI:
                NC_000004.12:140381203:A:G
                Gene:
                SCOC (Varview)
                Functional Consequence:
                3_prime_UTR_variant
                Validated:
                by frequency,by alfa
                MAF:
                G=0./0 (ALFA)
                G=0.000007/1 (GnomAD)
                HGVS:
                11.
                12.

                rs1465792857 [Homo sapiens]
                  Variant type:
                  DEL
                  Alleles:
                  G>- [Show Flanks]
                  Chromosome:
                  4:140381543 (GRCh38)
                  4:141302697 (GRCh37)
                  Canonical SPDI:
                  NC_000004.12:140381542:G:
                  Gene:
                  SCOC (Varview)
                  Functional Consequence:
                  3_prime_UTR_variant
                  Validated:
                  by frequency,by alfa
                  MAF:
                  -=0./0 (ALFA)
                  -=0.000008/2 (TOPMED)
                  HGVS:
                  13.
                  14.

                  rs1464237747 [Homo sapiens]
                    Variant type:
                    DELINS
                    Alleles:
                    A>- [Show Flanks]
                    Chromosome:
                    4:140382147 (GRCh38)
                    4:141303301 (GRCh37)
                    Canonical SPDI:
                    NC_000004.12:140382146:AAA:AA
                    Gene:
                    SCOC (Varview)
                    Functional Consequence:
                    3_prime_UTR_variant
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    AA=0./0 (ALFA)
                    -=0.000004/1 (TOPMED)
                    -=0.000007/1 (GnomAD)
                    HGVS:
                    16.

                    rs1460702358 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      A>G [Show Flanks]
                      Chromosome:
                      4:140382121 (GRCh38)
                      4:141303275 (GRCh37)
                      Canonical SPDI:
                      NC_000004.12:140382120:A:G
                      Gene:
                      SCOC (Varview)
                      Functional Consequence:
                      3_prime_UTR_variant
                      Validated:
                      by frequency,by alfa,by cluster
                      MAF:
                      G=0./0 (ALFA)
                      G=0.000008/2 (TOPMED)
                      G=0.000021/3 (GnomAD)
                      HGVS:
                      17.

                      rs1458807091 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        T>C [Show Flanks]
                        Chromosome:
                        4:140382173 (GRCh38)
                        4:141303327 (GRCh37)
                        Canonical SPDI:
                        NC_000004.12:140382172:T:C
                        Gene:
                        SCOC (Varview)
                        Functional Consequence:
                        3_prime_UTR_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        C=0./0 (ALFA)
                        C=0.000008/2 (TOPMED)
                        C=0.000014/2 (GnomAD)
                        HGVS:
                        18.

                        rs1458373102 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          A>T [Show Flanks]
                          Chromosome:
                          4:140381620 (GRCh38)
                          4:141302774 (GRCh37)
                          Canonical SPDI:
                          NC_000004.12:140381619:A:T
                          Gene:
                          SCOC (Varview)
                          Functional Consequence:
                          3_prime_UTR_variant
                          Validated:
                          by frequency,by alfa
                          MAF:
                          T=0./0 (ALFA)
                          T=0.000007/1 (GnomAD)
                          HGVS:
                          19.
                          20.

                          rs1452398565 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            T>C [Show Flanks]
                            Chromosome:
                            4:140343534 (GRCh38)
                            4:141264688 (GRCh37)
                            Canonical SPDI:
                            NC_000004.12:140343533:T:C
                            Gene:
                            SCOC (Varview), SCOC-AS1 (Varview)
                            Functional Consequence:
                            intron_variant,genic_upstream_transcript_variant,5_prime_UTR_variant
                            Validated:
                            by frequency,by alfa
                            MAF:
                            C=0.000071/1 (ALFA)
                            C=0.000004/1 (TOPMED)
                            HGVS:

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