SNP Links for Nucleotide (Select 237858769) - SNP

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Links from Nucleotide

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Select item 14909450861.

rs1490945086 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 17:34256760 (GRCh38)
17:32583779 (GRCh37)
Canonical SPDI:: NC_000017.11:34256759:C:A
Gene:: CCL2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.34256760C>A, NC_000017.10:g.32583779C>A, NG_012123.1:g.6484C>A, NM_002982.4:c.233C>A, NM_002982.3:c.233C>A, NP_002973.1:p.Pro78His

Select item 14903031132.

rs1490303113 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:34255415 (GRCh38)
17:32582434 (GRCh37)
Canonical SPDI:: NC_000017.11:34255414:C:T
Gene:: CCL2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.34255415C>T, NC_000017.10:g.32582434C>T, NG_012123.1:g.5139C>T, NM_002982.4:c.66C>T, NM_002982.3:c.66C>T

Select item 14901539223.

rs1490153922 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:34250281 (GRCh38)
17:32577300 (GRCh37)
Canonical SPDI:: NC_000017.11:34250280:G:A
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.002053/6 (KOREAN)
HGVS:: NC_000017.11:g.34250281G>A, NC_000017.10:g.32577300G>A, NG_012123.1:g.5G>A

Select item 14898135974.

rs1489813597 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:34256764 (GRCh38)
17:32583783 (GRCh37)
Canonical SPDI:: NC_000017.11:34256763:G:A
Gene:: CCL2 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.34256764G>A, NC_000017.10:g.32583783G>A, NG_012123.1:g.6488G>A, NM_002982.4:c.237G>A, NM_002982.3:c.237G>A

Select item 14897479925.

rs1489747992 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 17:34256835 (GRCh38)
17:32583854 (GRCh37)
Canonical SPDI:: NC_000017.11:34256834:C:G
Gene:: CCL2 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.34256835C>G, NC_000017.10:g.32583854C>G, NG_012123.1:g.6559C>G, NM_002982.4:c.*8C>G, NM_002982.3:c.*8C>G

Select item 14889049896.

rs1488904989 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:34252048 (GRCh38)
17:32579067 (GRCh37)
Canonical SPDI:: NC_000017.11:34252047:G:A
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.34252048G>A, NC_000017.10:g.32579067G>A, NG_012123.1:g.1772G>A

Select item 14887606157.

rs1488760615 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:34254774 (GRCh38)
17:32581793 (GRCh37)
Canonical SPDI:: NC_000017.11:34254773:A:G
Gene:: CCL2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000017.11:g.34254774A>G, NC_000017.10:g.32581793A>G, NG_012123.1:g.4498A>G

Select item 14884016048.

rs1488401604 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 17:34252940 (GRCh38)
17:32579959 (GRCh37)
Canonical SPDI:: NC_000017.11:34252939:G:A,NC_000017.11:34252939:G:T
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.34252940G>A, NC_000017.11:g.34252940G>T, NC_000017.10:g.32579959G>A, NC_000017.10:g.32579959G>T, NG_012123.1:g.2664G>A, NG_012123.1:g.2664G>T

Select item 14879083469.

rs1487908346 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:34252589 (GRCh38)
17:32579608 (GRCh37)
Canonical SPDI:: NC_000017.11:34252588:C:T
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.00003/8 (TOPMED)
T=0.000035/1 (TOMMO)
T=0.000036/5 (GnomAD)
HGVS:: NC_000017.11:g.34252589C>T, NC_000017.10:g.32579608C>T, NG_012123.1:g.2313C>T

Select item 148723307310.

rs1487233073 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:34254123 (GRCh38)
17:32581142 (GRCh37)
Canonical SPDI:: NC_000017.11:34254122:G:A
Gene:: CCL2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.34254123G>A, NC_000017.10:g.32581142G>A, NG_012123.1:g.3847G>A

Select item 148657500811.

rs1486575008 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:34253126 (GRCh38)
17:32580145 (GRCh37)
Canonical SPDI:: NC_000017.11:34253125:T:C
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.34253126T>C, NC_000017.10:g.32580145T>C, NG_012123.1:g.2850T>C

Select item 148603550712.

rs1486035507 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:34254882 (GRCh38)
17:32581901 (GRCh37)
Canonical SPDI:: NC_000017.11:34254881:G:A
Gene:: CCL2 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000017.11:g.34254882G>A, NC_000017.10:g.32581901G>A, NG_012123.1:g.4606G>A

Select item 148583448113.

rs1485834481 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 17:34253224 (GRCh38)
17:32580243 (GRCh37)
Canonical SPDI:: NC_000017.11:34253223:GG:G
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.34253225del, NC_000017.10:g.32580244del, NG_012123.1:g.2949del

Select item 148570270714.

rs1485702707 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: 17:34252246 (GRCh38)
17:32579265 (GRCh37)
Canonical SPDI:: NC_000017.11:34252245:TTTTTTT:TTTTTT
Validated:: by frequency,by alfa
MAF:: TTTTTT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.34252252del, NC_000017.10:g.32579271del, NG_012123.1:g.1976del

Select item 148541787515.

rs1485417875 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:34250806 (GRCh38)
17:32577825 (GRCh37)
Canonical SPDI:: NC_000017.11:34250805:T:C
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
HGVS:: NC_000017.11:g.34250806T>C, NC_000017.10:g.32577825T>C, NG_012123.1:g.530T>C

Select item 148517161716.

rs1485171617 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTAT>- [Show Flanks]
Chromosome:: 17:34252382 (GRCh38)
17:32579401 (GRCh37)
Canonical SPDI:: NC_000017.11:34252378:TATCTAT:TAT
Validated:: by frequency,by alfa
MAF:: TAT=0./0 (ALFA)
HGVS:: NC_000017.11:g.34252382_34252385del, NC_000017.10:g.32579401_32579404del, NG_012123.1:g.2106_2109del

Select item 148509744417.

rs1485097444 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:34258158 (GRCh38)
17:32585177 (GRCh37)
Canonical SPDI:: NC_000017.11:34258157:T:C
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.34258158T>C, NC_000017.10:g.32585177T>C, NG_012123.1:g.7882T>C

Select item 148472072918.

rs1484720729 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:34251795 (GRCh38)
17:32578814 (GRCh37)
Canonical SPDI:: NC_000017.11:34251794:C:T
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.34251795C>T, NC_000017.10:g.32578814C>T, NG_012123.1:g.1519C>T

Select item 148440225619.

rs1484402256 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 17:34255510 (GRCh38)
17:32582529 (GRCh37)
Canonical SPDI:: NC_000017.11:34255509:G:C
Gene:: CCL2 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000021/3 (GnomAD)
HGVS:: NC_000017.11:g.34255510G>C, NC_000017.10:g.32582529G>C, NG_012123.1:g.5234G>C

Select item 148406034120.

rs1484060341 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 17:34250930 (GRCh38)
17:32577949 (GRCh37)
Canonical SPDI:: NC_000017.11:34250929:T:G
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.34250930T>G, NC_000017.10:g.32577949T>G, NG_012123.1:g.654T>G