SNP Links for Nucleotide (Select 238018098) - SNP

Links from Nucleotide

Items: 1 to 20 of 387

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Select item 14907806001.

rs1490780600 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:1043714 (GRCh38)
10:1089654 (GRCh37)
Canonical SPDI:: NC_000010.11:1043713:G:A
Gene:: IDI1 (Varview), IDI2-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: A=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000010.11:g.1043714G>A, NC_000010.10:g.1089654G>A, NR_027709.1:n.818G>A, NR_027708.1:n.734G>A, NR_024628.1:n.601G>A, NR_024629.1:n.438G>A, NM_018470.1:c.257G>A

Select item 14894388022.

rs1489438802 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 10:1022732 (GRCh38)
10:1068672 (GRCh37)
Canonical SPDI:: NC_000010.11:1022731:C:G
Gene:: IDI2-AS1 (Varview), IDI2 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant
HGVS:: NC_000010.11:g.1022732C>G, NC_000010.10:g.1068672C>G, NM_033261.3:c.186G>C, NM_033261.2:c.186G>C, NR_027709.1:n.96C>G, NR_027708.1:n.96C>G, NR_024628.1:n.96C>G, NR_024629.1:n.96C>G, NM_018470.1:c.-86C>G, NP_150286.1:p.Lys62Asn

Select item 14861800003.

rs1486180000 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:1043965 (GRCh38)
10:1089905 (GRCh37)
Canonical SPDI:: NC_000010.11:1043964:T:C
Gene:: IDI1 (Varview), IDI2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.1043965T>C, NC_000010.10:g.1089905T>C, NR_027709.1:n.1069T>C, NR_027708.1:n.985T>C, NR_024628.1:n.852T>C, NR_024629.1:n.689T>C, NM_018470.1:c.508T>C

Select item 14835832494.

rs1483583249 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:1044159 (GRCh38)
10:1090099 (GRCh37)
Canonical SPDI:: NC_000010.11:1044158:C:T
Gene:: IDI1 (Varview), IDI2-AS1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant,genic_upstream_transcript_variant,synonymous_variant,non_coding_transcript_variant,coding_sequence_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000031/1 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.1044159C>T, NC_000010.10:g.1090099C>T, NM_004508.4:c.153G>A, NM_004508.3:c.153G>A, NM_004508.2:c.153G>A, NM_001317956.2:c.-16G>A, NM_001317956.1:c.-16G>A, NM_001317955.2:c.-16G>A, NM_001317955.1:c.-16G>A, XM_047425176.1:c.-16G>A, NR_027709.1:n.1263C>T, NR_027708.1:n.1179C>T, NR_024628.1:n.1046C>T, NR_024629.1:n.883C>T, NM_018470.1:c.*135C>T

Select item 14833625745.

rs1483362574 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:1022733 (GRCh38)
10:1068673 (GRCh37)
Canonical SPDI:: NC_000010.11:1022732:T:C
Gene:: IDI2-AS1 (Varview), IDI2 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.1022733T>C, NC_000010.10:g.1068673T>C, NM_033261.3:c.185A>G, NM_033261.2:c.185A>G, NR_027709.1:n.97T>C, NR_027708.1:n.97T>C, NR_024628.1:n.97T>C, NR_024629.1:n.97T>C, NM_018470.1:c.-85T>C, NP_150286.1:p.Lys62Arg

Select item 14813490756.

rs1481349075 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 10:1043641 (GRCh38)
10:1089581 (GRCh37)
Canonical SPDI:: NC_000010.11:1043640:A:C
Gene:: IDI1 (Varview), IDI2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000010.11:g.1043641A>C, NC_000010.10:g.1089581A>C, NR_027709.1:n.745A>C, NR_027708.1:n.661A>C, NR_024628.1:n.528A>C, NR_024629.1:n.365A>C, NM_018470.1:c.185A>C

Select item 14794263247.

rs1479426324 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 10:1044074 (GRCh38)
10:1090014 (GRCh37)
Canonical SPDI:: NC_000010.11:1044073:G:C
Gene:: IDI1 (Varview), IDI2-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,non_coding_transcript_variant,missense_variant,coding_sequence_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000010.11:g.1044074G>C, NC_000010.10:g.1090014G>C, NM_004508.4:c.238C>G, NM_004508.3:c.238C>G, NM_004508.2:c.238C>G, NM_001317956.2:c.70C>G, NM_001317956.1:c.70C>G, NM_001317955.2:c.70C>G, NM_001317955.1:c.70C>G, XM_047425176.1:c.70C>G, NR_027709.1:n.1178G>C, NR_027708.1:n.1094G>C, NR_024628.1:n.961G>C, NR_024629.1:n.798G>C, NM_018470.1:c.*50G>C, NP_004499.2:p.Leu80Val, NP_001304885.1:p.Leu24Val, NP_001304884.1:p.Leu24Val, XP_047281132.1:p.Leu24Val

Select item 14793431698.

rs1479343169 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:1043564 (GRCh38)
10:1089504 (GRCh37)
Canonical SPDI:: NC_000010.11:1043563:T:C
Gene:: IDI1 (Varview), IDI2-AS1 (Varview)
Functional Consequence:: 5_prime_UTR_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000010.11:g.1043564T>C, NC_000010.10:g.1089504T>C, XM_024447980.2:c.-55A>G, XM_024447980.1:c.-55A>G, NR_027709.1:n.668T>C, NR_027708.1:n.584T>C, NR_024628.1:n.451T>C, NR_024629.1:n.288T>C, NM_018470.1:c.107T>C

Select item 14781816389.

rs1478181638 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:1035950 (GRCh38)
10:1081890 (GRCh37)
Canonical SPDI:: NC_000010.11:1035949:C:T
Gene:: IDI2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.000014/2 (GnomAD_exomes)
HGVS:: NC_000010.11:g.1035950C>T, NC_000010.10:g.1081890C>T, NR_027709.1:n.501C>T, NR_027708.1:n.417C>T, NR_024628.1:n.284C>T

Select item 147537823610.

rs1475378236 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 10:1035938 (GRCh38)
10:1081878 (GRCh37)
Canonical SPDI:: NC_000010.11:1035937:G:T
Gene:: IDI2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.1035938G>T, NC_000010.10:g.1081878G>T, NR_027709.1:n.489G>T, NR_027708.1:n.405G>T, NR_024628.1:n.272G>T

Select item 147344058911.

rs1473440589 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 10:1022748 (GRCh38)
10:1068688 (GRCh37)
Canonical SPDI:: NC_000010.11:1022747:A:T
Gene:: IDI2-AS1 (Varview), IDI2 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,missense_variant
HGVS:: NC_000010.11:g.1022748A>T, NC_000010.10:g.1068688A>T, NM_033261.3:c.170T>A, NM_033261.2:c.170T>A, NR_027709.1:n.112A>T, NR_027708.1:n.112A>T, NR_024628.1:n.112A>T, NR_024629.1:n.112A>T, NM_018470.1:c.-70A>T, NP_150286.1:p.Val57Asp

Select item 147216980112.

rs1472169801 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:1043640 (GRCh38)
10:1089580 (GRCh37)
Canonical SPDI:: NC_000010.11:1043639:A:G
Gene:: IDI1 (Varview), IDI2-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000084/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.1043640A>G, NC_000010.10:g.1089580A>G, NR_027709.1:n.744A>G, NR_027708.1:n.660A>G, NR_024628.1:n.527A>G, NR_024629.1:n.364A>G, NM_018470.1:c.184A>G

Select item 147021870713.

rs1470218707 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 10:1044050 (GRCh38)
10:1089990 (GRCh37)
Canonical SPDI:: NC_000010.11:1044049:T:C
Gene:: IDI1 (Varview), IDI2-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,missense_variant,coding_sequence_variant,non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.1044050T>C, NC_000010.10:g.1089990T>C, NM_004508.4:c.262A>G, NM_004508.3:c.262A>G, NM_004508.2:c.262A>G, NM_001317956.2:c.94A>G, NM_001317956.1:c.94A>G, NM_001317955.2:c.94A>G, NM_001317955.1:c.94A>G, XM_047425176.1:c.94A>G, NR_027709.1:n.1154T>C, NR_027708.1:n.1070T>C, NR_024628.1:n.937T>C, NR_024629.1:n.774T>C, NM_018470.1:c.*26T>C, NP_004499.2:p.Ile88Val, NP_001304885.1:p.Ile32Val, NP_001304884.1:p.Ile32Val, XP_047281132.1:p.Ile32Val

Select item 146448235014.

rs1464482350 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 10:1035895 (GRCh38)
10:1081835 (GRCh37)
Canonical SPDI:: NC_000010.11:1035894:A:C
Gene:: IDI2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: C=0.000021/3 (GnomAD_exomes)
HGVS:: NC_000010.11:g.1035895A>C, NC_000010.10:g.1081835A>C, NR_027709.1:n.446A>C, NR_027708.1:n.362A>C, NR_024628.1:n.229A>C

Select item 146273216215.

rs1462732162 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:1043811 (GRCh38)
10:1089751 (GRCh37)
Canonical SPDI:: NC_000010.11:1043810:G:A
Gene:: IDI1 (Varview), IDI2-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000010.11:g.1043811G>A, NC_000010.10:g.1089751G>A, NR_027709.1:n.915G>A, NR_027708.1:n.831G>A, NR_024628.1:n.698G>A, NR_024629.1:n.535G>A, NM_018470.1:c.354G>A

Select item 146027198616.

rs1460271986 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 10:1022655 (GRCh38)
10:1068595 (GRCh37)
Canonical SPDI:: NC_000010.11:1022654:A:C,NC_000010.11:1022654:A:G
Gene:: IDI2-AS1 (Varview), IDI2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00007/1 (ALFA)
HGVS:: NC_000010.11:g.1022655A>C, NC_000010.11:g.1022655A>G, NC_000010.10:g.1068595A>C, NC_000010.10:g.1068595A>G, NR_027709.1:n.19A>C, NR_027709.1:n.19A>G, NR_027708.1:n.19A>C, NR_027708.1:n.19A>G, NR_024628.1:n.19A>C, NR_024628.1:n.19A>G, NR_024629.1:n.19A>C, NR_024629.1:n.19A>G

Select item 145982335517.

rs1459823355 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 10:1043742 (GRCh38)
10:1089682 (GRCh37)
Canonical SPDI:: NC_000010.11:1043741:A:T
Gene:: IDI1 (Varview), IDI2-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: T=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000010.11:g.1043742A>T, NC_000010.10:g.1089682A>T, NR_027709.1:n.846A>T, NR_027708.1:n.762A>T, NR_024628.1:n.629A>T, NR_024629.1:n.466A>T, NM_018470.1:c.284A>T

Select item 145979220518.

rs1459792205 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 10:1043930 (GRCh38)
10:1089870 (GRCh37)
Canonical SPDI:: NC_000010.11:1043929:T:G
Gene:: IDI1 (Varview), IDI2-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000010.11:g.1043930T>G, NC_000010.10:g.1089870T>G, NR_027709.1:n.1034T>G, NR_027708.1:n.950T>G, NR_024628.1:n.817T>G, NR_024629.1:n.654T>G, NM_018470.1:c.473T>G

Select item 145472578119.

rs1454725781 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:1043999 (GRCh38)
10:1089939 (GRCh37)
Canonical SPDI:: NC_000010.11:1043998:C:T
Gene:: IDI1 (Varview), IDI2-AS1 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,missense_variant,upstream_transcript_variant,non_coding_transcript_variant,coding_sequence_variant
Validated:: by frequency,by cluster
MAF:: T=0.000004/1 (GnomAD_exomes)
T=0.000071/2 (TOMMO)
HGVS:: NC_000010.11:g.1043999C>T, NC_000010.10:g.1089939C>T, NM_004508.4:c.313G>A, NM_004508.3:c.313G>A, NM_004508.2:c.313G>A, NM_001317956.2:c.145G>A, NM_001317956.1:c.145G>A, NM_001317955.2:c.145G>A, NM_001317955.1:c.145G>A, XM_047425176.1:c.145G>A, NR_027709.1:n.1103C>T, NR_027708.1:n.1019C>T, NR_024628.1:n.886C>T, NR_024629.1:n.723C>T, NM_018470.1:c.542C>T, NP_004499.2:p.Gly105Arg, NP_001304885.1:p.Gly49Arg, NP_001304884.1:p.Gly49Arg, XP_047281132.1:p.Gly49Arg

Select item 145202223020.

rs1452022230 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:1043799 (GRCh38)
10:1089739 (GRCh37)
Canonical SPDI:: NC_000010.11:1043798:C:T
Gene:: IDI1 (Varview), IDI2-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.1043799C>T, NC_000010.10:g.1089739C>T, NR_027709.1:n.903C>T, NR_027708.1:n.819C>T, NR_024628.1:n.686C>T, NR_024629.1:n.523C>T, NM_018470.1:c.342C>T

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