SNP Links for Nucleotide (Select 254826699) - SNP

Links from Nucleotide

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Select item 14907185251.

rs1490718525 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: 12:131209785 (GRCh38)
12:131694330 (GRCh37)
Canonical SPDI:: NC_000012.12:131209784:A:C,NC_000012.12:131209784:A:G,NC_000012.12:131209784:A:T
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.131209785A>C, NC_000012.12:g.131209785A>G, NC_000012.12:g.131209785A>T, NC_000012.11:g.131694330A>C, NC_000012.11:g.131694330A>G, NC_000012.11:g.131694330A>T, NR_026670.2:n.1136A>C, NR_026670.2:n.1136A>G, NR_026670.2:n.1136A>T

Select item 14896375422.

rs1489637542 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:131165037 (GRCh38)
12:131649582 (GRCh37)
Canonical SPDI:: NC_000012.12:131165036:G:A
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.131165037G>A, NC_000012.11:g.131649582G>A, NR_026670.2:n.27G>A

Select item 14885203273.

rs1488520327 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 12:131207701 (GRCh38)
12:131692246 (GRCh37)
Canonical SPDI:: NC_000012.12:131207700:G:T
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.131207701G>T, NC_000012.11:g.131692246G>T, NR_026670.2:n.399G>T

Select item 14873157364.

rs1487315736 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 12:131212774 (GRCh38)
12:131697319 (GRCh37)
Canonical SPDI:: NC_000012.12:131212773:T:A,NC_000012.12:131212773:T:C
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000012.12:g.131212774T>A, NC_000012.12:g.131212774T>C, NC_000012.11:g.131697319T>A, NC_000012.11:g.131697319T>C, NR_026670.2:n.2316T>A, NR_026670.2:n.2316T>C

Select item 14870111885.

rs1487011188 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:131212679 (GRCh38)
12:131697224 (GRCh37)
Canonical SPDI:: NC_000012.12:131212678:G:A
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.131212679G>A, NC_000012.11:g.131697224G>A, NR_026670.2:n.2221G>A

Select item 14859354516.

rs1485935451 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 12:131209370 (GRCh38)
12:131693915 (GRCh37)
Canonical SPDI:: NC_000012.12:131209369:C:G,NC_000012.12:131209369:C:T
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000012.12:g.131209370C>G, NC_000012.12:g.131209370C>T, NC_000012.11:g.131693915C>G, NC_000012.11:g.131693915C>T, NR_026670.2:n.721C>G, NR_026670.2:n.721C>T

Select item 14847450327.

rs1484745032 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 12:131212233 (GRCh38)
12:131696778 (GRCh37)
Canonical SPDI:: NC_000012.12:131212232:A:C,NC_000012.12:131212232:A:G
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000094/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.131212233A>C, NC_000012.12:g.131212233A>G, NC_000012.11:g.131696778A>C, NC_000012.11:g.131696778A>G, NR_026670.2:n.1775A>C, NR_026670.2:n.1775A>G

Select item 14838878018.

rs1483887801 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:131210012 (GRCh38)
12:131694557 (GRCh37)
Canonical SPDI:: NC_000012.12:131210011:T:C
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.131210012T>C, NC_000012.11:g.131694557T>C, NR_026670.2:n.1363T>C

Select item 14837947269.

rs1483794726 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:131212519 (GRCh38)
12:131697064 (GRCh37)
Canonical SPDI:: NC_000012.12:131212518:A:G
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.131212519A>G, NC_000012.11:g.131697064A>G, NR_026670.2:n.2061A>G

Select item 148361243510.

rs1483612435 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 12:131209626 (GRCh38)
12:131694171 (GRCh37)
Canonical SPDI:: NC_000012.12:131209625:C:G
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
G=0.000036/5 (GnomAD)
HGVS:: NC_000012.12:g.131209626C>G, NC_000012.11:g.131694171C>G, NR_026670.2:n.977C>G

Select item 148334387511.

rs1483343875 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:131165197 (GRCh38)
12:131649742 (GRCh37)
Canonical SPDI:: NC_000012.12:131165196:C:T
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.131165197C>T, NC_000012.11:g.131649742C>T, NR_026670.2:n.187C>T

Select item 148284984912.

rs1482849849 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 12:131209575 (GRCh38)
12:131694120 (GRCh37)
Canonical SPDI:: NC_000012.12:131209574:T:G
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.131209575T>G, NC_000012.11:g.131694120T>G, NR_026670.2:n.926T>G

Select item 148276922413.

rs1482769224 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 12:131202885 (GRCh38)
12:131687430 (GRCh37)
Canonical SPDI:: NC_000012.12:131202884:CCC:CC
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.131202887del, NC_000012.11:g.131687432del, NR_026670.2:n.337del

Select item 148261480614.

rs1482614806 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 12:131210169 (GRCh38)
12:131694714 (GRCh37)
Canonical SPDI:: NC_000012.12:131210168:C:A
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000019/5 (TOPMED)
HGVS:: NC_000012.12:g.131210169C>A, NC_000012.11:g.131694714C>A, NR_026670.2:n.1520C>A

Select item 148187706515.

rs1481877065 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 12:131210024 (GRCh38)
12:131694569 (GRCh37)
Canonical SPDI:: NC_000012.12:131210023:T:A,NC_000012.12:131210023:T:C
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000012.12:g.131210024T>A, NC_000012.12:g.131210024T>C, NC_000012.11:g.131694569T>A, NC_000012.11:g.131694569T>C, NR_026670.2:n.1375T>A, NR_026670.2:n.1375T>C

Select item 148134055016.

rs1481340550 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 12:131212379 (GRCh38)
12:131696924 (GRCh37)
Canonical SPDI:: NC_000012.12:131212378:C:G
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000012.12:g.131212379C>G, NC_000012.11:g.131696924C>G, NR_026670.2:n.1921C>G

Select item 148012941117.

rs1480129411 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAGA>- [Show Flanks]
Chromosome:: 12:131165130 (GRCh38)
12:131649675 (GRCh37)
Canonical SPDI:: NC_000012.12:131165126:AGAGAGA:AGA
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGA=0./0 (ALFA)
-=0.000021/3 (GnomAD)
-=0.000038/10 (TOPMED)
HGVS:: NC_000012.12:g.131165128GA[1], NC_000012.11:g.131649673GA[1], NR_026670.2:n.118GA[1]

Select item 147891966518.

rs1478919665 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 12:131207872 (GRCh38)
12:131692417 (GRCh37)
Canonical SPDI:: NC_000012.12:131207871:A:C
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.131207872A>C, NC_000012.11:g.131692417A>C, NR_026670.2:n.570A>C

Select item 147791159519.

rs1477911595 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:131209503 (GRCh38)
12:131694048 (GRCh37)
Canonical SPDI:: NC_000012.12:131209502:G:A
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000026/7 (TOPMED)
HGVS:: NC_000012.12:g.131209503G>A, NC_000012.11:g.131694048G>A, NR_026670.2:n.854G>A

Select item 147728060420.

rs1477280604 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 12:131212234 (GRCh38)
12:131696779 (GRCh37)
Canonical SPDI:: NC_000012.12:131212233:G:T
Gene:: LINC01257 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000026/7 (TOPMED)
HGVS:: NC_000012.12:g.131212234G>T, NC_000012.11:g.131696779G>T, NR_026670.2:n.1776G>T

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