SNP Links for Nucleotide (Select 261278316) - SNP

Links from Nucleotide

Items: 1 to 20 of 156

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Select item 14832061091.

rs1483206109 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 19:36311792 (GRCh38)
19:36802694 (GRCh37)
Canonical SPDI:: NC_000019.10:36311791:G:A,NC_000019.10:36311791:G:C
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.00059/7 (ALFA)
HGVS:: NC_000019.10:g.36311792G>A, NC_000019.10:g.36311792G>C, NC_000019.9:g.36802694G>A, NC_000019.9:g.36802694G>C, NR_029389.1:n.450G>A, NR_029389.1:n.450G>C

Select item 14801593932.

rs1480159393 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 19:36312652 (GRCh38)
19:36803554 (GRCh37)
Canonical SPDI:: NC_000019.10:36312649:ATAT:AT
Gene:: LOC100134317 (Varview), LINC00665 (Varview)
Functional Consequence:: non_coding_transcript_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: ATAT=0./0 (ALFA)
-=0.00055/1 (Korea1K)
HGVS:: NC_000019.10:g.36312650AT[1], NC_000019.9:g.36803552AT[1], NR_029389.1:n.579AT[1]

Select item 14800584763.

rs1480058476 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:36311624 (GRCh38)
19:36802526 (GRCh37)
Canonical SPDI:: NC_000019.10:36311623:G:A
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000019.10:g.36311624G>A, NC_000019.9:g.36802526G>A, NR_029389.1:n.282G>A

Select item 14795990024.

rs1479599002 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:36311479 (GRCh38)
19:36802381 (GRCh37)
Canonical SPDI:: NC_000019.10:36311478:C:G
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000019.10:g.36311479C>G, NC_000019.9:g.36802381C>G, NR_029389.1:n.137C>G

Select item 14685905995.

rs1468590599 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 19:36312560 (GRCh38)
19:36803462 (GRCh37)
Canonical SPDI:: NC_000019.10:36312559:T:G
Gene:: LOC100134317 (Varview), LINC00665 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000019.10:g.36312560T>G, NC_000019.9:g.36803462T>G, NR_029389.1:n.489T>G

Select item 14675409556.

rs1467540955 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 19:36311381 (GRCh38)
19:36802283 (GRCh37)
Canonical SPDI:: NC_000019.10:36311380:C:G,NC_000019.10:36311380:C:T
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000008/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.36311381C>G, NC_000019.10:g.36311381C>T, NC_000019.9:g.36802283C>G, NC_000019.9:g.36802283C>T, NR_029389.1:n.39C>G, NR_029389.1:n.39C>T

Select item 14664156967.

rs1466415696 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 19:36311576 (GRCh38)
19:36802478 (GRCh37)
Canonical SPDI:: NC_000019.10:36311575:C:A,NC_000019.10:36311575:C:G,NC_000019.10:36311575:C:T
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.36311576C>A, NC_000019.10:g.36311576C>G, NC_000019.10:g.36311576C>T, NC_000019.9:g.36802478C>A, NC_000019.9:g.36802478C>G, NC_000019.9:g.36802478C>T, NR_029389.1:n.234C>A, NR_029389.1:n.234C>G, NR_029389.1:n.234C>T

Select item 14637149888.

rs1463714988 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:36311759 (GRCh38)
19:36802661 (GRCh37)
Canonical SPDI:: NC_000019.10:36311758:C:T
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00093/11 (ALFA)
T=0.00069/2 (KOREAN)
HGVS:: NC_000019.10:g.36311759C>T, NC_000019.9:g.36802661C>T, NR_029389.1:n.417C>T

Select item 14602699209.

rs1460269920 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:36311730 (GRCh38)
19:36802632 (GRCh37)
Canonical SPDI:: NC_000019.10:36311729:C:A
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000019.10:g.36311730C>A, NC_000019.9:g.36802632C>A, NR_029389.1:n.388C>A

Select item 145693140010.

rs1456931400 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 19:36311460 (GRCh38)
19:36802362 (GRCh37)
Canonical SPDI:: NC_000019.10:36311459:C:A,NC_000019.10:36311459:C:T
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000019.10:g.36311460C>A, NC_000019.10:g.36311460C>T, NC_000019.9:g.36802362C>A, NC_000019.9:g.36802362C>T, NR_029389.1:n.118C>A, NR_029389.1:n.118C>T

Select item 145508217811.

rs1455082178 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:36312608 (GRCh38)
19:36803510 (GRCh37)
Canonical SPDI:: NC_000019.10:36312607:C:A
Gene:: LOC100134317 (Varview), LINC00665 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000008/1 (GnomAD)
HGVS:: NC_000019.10:g.36312608C>A, NC_000019.9:g.36803510C>A, NR_029389.1:n.537C>A

Select item 145157573112.

rs1451575731 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:36311760 (GRCh38)
19:36802662 (GRCh37)
Canonical SPDI:: NC_000019.10:36311759:G:A
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000019.10:g.36311760G>A, NC_000019.9:g.36802662G>A, NR_029389.1:n.418G>A

Select item 145156695813.

rs1451566958 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:36311432 (GRCh38)
19:36802334 (GRCh37)
Canonical SPDI:: NC_000019.10:36311431:G:A
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.00008/1 (ALFA)
A=0.00001/1 (GnomAD)
HGVS:: NC_000019.10:g.36311432G>A, NC_000019.9:g.36802334G>A, NR_029389.1:n.90G>A

Select item 144901402714.

rs1449014027 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:36311365 (GRCh38)
19:36802267 (GRCh37)
Canonical SPDI:: NC_000019.10:36311364:G:A
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00007/1 (TOMMO)
A=0.00016/1 (1000Genomes)
HGVS:: NC_000019.10:g.36311365G>A, NC_000019.9:g.36802267G>A, NR_029389.1:n.23G>A

Select item 144123077015.

rs1441230770 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 19:36311465 (GRCh38)
19:36802367 (GRCh37)
Canonical SPDI:: NC_000019.10:36311464:A:C,NC_000019.10:36311464:A:G
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000027/3 (GnomAD)
G=0.000036/1 (TOMMO)
HGVS:: NC_000019.10:g.36311465A>C, NC_000019.10:g.36311465A>G, NC_000019.9:g.36802367A>C, NC_000019.9:g.36802367A>G, NR_029389.1:n.123A>C, NR_029389.1:n.123A>G

Select item 144009626216.

rs1440096262 [Homo sapiens]

Variant type:: INS
Alleles:: ->CTAACCA [Show Flanks]
Chromosome:: 19:36311452 (GRCh38)
19:36802355 (GRCh37)
Canonical SPDI:: NC_000019.10:36311452::CTAACCA
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: CTAACCA=0.00153/125 (GnomAD)
CTAACCA=0.01404/8 (NorthernSweden)
HGVS:: NC_000019.10:g.36311452_36311453insCTAACCA, NC_000019.9:g.36802354_36802355insCTAACCA, NR_029389.1:n.110_111insCTAACCA

Select item 142922586917.

rs1429225869 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:36311633 (GRCh38)
19:36802535 (GRCh37)
Canonical SPDI:: NC_000019.10:36311632:C:G
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.36311633C>G, NC_000019.9:g.36802535C>G, NR_029389.1:n.291C>G

Select item 142838014118.

rs1428380141 [Homo sapiens]

Variant type:: INS
Alleles:: ->AG [Show Flanks]
Chromosome:: 19:36311451 (GRCh38)
19:36802354 (GRCh37)
Canonical SPDI:: NC_000019.10:36311451::AG
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AG=0.00251/11 (ALFA)
AG=0.00062/4 (1000Genomes)
AG=0.00144/123 (GnomAD)
AG=0.01347/8 (NorthernSweden)
HGVS:: NC_000019.10:g.36311451_36311452insAG, NC_000019.9:g.36802353_36802354insAG, NR_029389.1:n.109_110insAG

Select item 142574808019.

rs1425748080 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:36311719 (GRCh38)
19:36802621 (GRCh37)
Canonical SPDI:: NC_000019.10:36311718:G:A
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000019.10:g.36311719G>A, NC_000019.9:g.36802621G>A, NR_029389.1:n.377G>A

Select item 142476699420.

rs1424766994 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:36311459 (GRCh38)
19:36802361 (GRCh37)
Canonical SPDI:: NC_000019.10:36311458:G:A
Gene:: LOC100134317 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000019.10:g.36311459G>A, NC_000019.9:g.36802361G>A, NR_029389.1:n.117G>A

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