SNP Links for Nucleotide (Select 262205288) - SNP

Links from Nucleotide

Items: 1 to 20 of 23

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Select item 14375631441.

rs1437563144 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:62564997 (GRCh38)
20:61162204 (GRCh37)
Canonical SPDI:: NC_000020.11:62564996:G:A
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000015/4 (TOPMED)
HGVS:: NC_000020.11:g.62564997G>A, NW_003571063.2:g.108515G>A, NC_000020.10:g.61162204G>A, NM_178463.4:c.17G>A, NM_178463.3:c.17G>A, NM_001302812.2:c.17G>A, NR_171007.1:n.796G>A, NM_001302812.1:c.17G>A, NR_029676.1:n.86G>A

Select item 13703760522.

rs1370376052 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:62564939 (GRCh38)
20:61162146 (GRCh37)
Canonical SPDI:: NC_000020.11:62564938:T:C
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000020.11:g.62564939T>C, NW_003571063.2:g.108457T>C, NC_000020.10:g.61162146T>C, NR_029676.1:n.28T>C

Select item 12825372493.

rs1282537249 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:62564933 (GRCh38)
20:61162140 (GRCh37)
Canonical SPDI:: NC_000020.11:62564932:A:G
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.62564933A>G, NW_003571063.2:g.108451A>G, NC_000020.10:g.61162140A>G, NR_029676.1:n.22A>G

Select item 12351646074.

rs1235164607 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:62564935 (GRCh38)
20:61162142 (GRCh37)
Canonical SPDI:: NC_000020.11:62564934:C:T
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.62564935C>T, NW_003571063.2:g.108453C>T, NC_000020.10:g.61162142C>T, NR_029676.1:n.24C>T

Select item 12156972115.

rs1215697211 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 20:62564914 (GRCh38)
20:61162121 (GRCh37)
Canonical SPDI:: NC_000020.11:62564913:G:C
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000014/3 (GnomAD_exomes)
C=0.000042/11 (TOPMED)
HGVS:: NC_000020.11:g.62564914G>C, NW_003571063.2:g.108432G>C, NC_000020.10:g.61162121G>C, NR_029676.1:n.3G>C

Select item 10248286026.

rs1024828602 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 20:62564958 (GRCh38)
20:61162165 (GRCh37)
Canonical SPDI:: NC_000020.11:62564957:C:G,NC_000020.11:62564957:C:T
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
T=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000020.11:g.62564958C>G, NC_000020.11:g.62564958C>T, NW_003571063.2:g.108476C>G, NW_003571063.2:g.108476C>T, NC_000020.10:g.61162165C>G, NC_000020.10:g.61162165C>T, NR_029676.1:n.47C>G, NR_029676.1:n.47C>T

Select item 7827925137.

rs782792513 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 20:62564999 (GRCh38)
20:61162206 (GRCh37)
Canonical SPDI:: NC_000020.11:62564998:G:T
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.000004/1 (GnomAD_exomes)
T=0.000011/1 (ExAC)
HGVS:: NC_000020.11:g.62564999G>T, NW_003571063.2:g.108517G>T, NC_000020.10:g.61162206G>T, NM_178463.4:c.19G>T, NM_178463.3:c.19G>T, NM_001302812.2:c.19G>T, NR_171007.1:n.798G>T, NM_001302812.1:c.19G>T, NR_029676.1:n.88G>T

Select item 7825424718.

rs782542471 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 20:62565013 (GRCh38)
20:61162220 (GRCh37)
Canonical SPDI:: NC_000020.11:62565012:G:A,NC_000020.11:62565012:G:C,NC_000020.11:62565012:G:T
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.001092/2 (Korea1K)
A=0.002477/42 (TOMMO)
A=0.002738/8 (KOREAN)
HGVS:: NC_000020.11:g.62565013G>A, NC_000020.11:g.62565013G>C, NC_000020.11:g.62565013G>T, NW_003571063.2:g.108531G>A, NW_003571063.2:g.108531G>C, NW_003571063.2:g.108531G>T, NC_000020.10:g.61162220G>A, NC_000020.10:g.61162220G>C, NC_000020.10:g.61162220G>T, NM_178463.4:c.33G>A, NM_178463.4:c.33G>C, NM_178463.4:c.33G>T, NM_178463.3:c.33G>A, NM_178463.3:c.33G>C, NM_178463.3:c.33G>T, NM_001302812.2:c.33G>A, NM_001302812.2:c.33G>C, NM_001302812.2:c.33G>T, NR_171007.1:n.812G>A, NR_171007.1:n.812G>C, NR_171007.1:n.812G>T, NM_001302812.1:c.33G>A, NM_001302812.1:c.33G>C, NM_001302812.1:c.33G>T, NR_029676.1:n.102G>A, NR_029676.1:n.102G>C, NR_029676.1:n.102G>T

Select item 7823094489.

rs782309448 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 20:62565008 (GRCh38)
20:61162215 (GRCh37)
Canonical SPDI:: NC_000020.11:62565007:G:C
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: C=0./0 (TWINSUK)
C=0.0003/1 (ALSPAC)
HGVS:: NC_000020.11:g.62565008G>C, NW_003571063.2:g.108526G>C, NC_000020.10:g.61162215G>C, NM_178463.4:c.28G>C, NM_178463.3:c.28G>C, NM_001302812.2:c.28G>C, NR_171007.1:n.807G>C, NM_001302812.1:c.28G>C, NR_029676.1:n.97G>C

Select item 78217209210.

rs782172092 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:62564995 (GRCh38)
20:61162202 (GRCh37)
Canonical SPDI:: NC_000020.11:62564994:C:T
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.000011/1 (ExAC)
T=0.000016/4 (GnomAD_exomes)
HGVS:: NC_000020.11:g.62564995C>T, NW_003571063.2:g.108513C>T, NC_000020.10:g.61162202C>T, NM_178463.4:c.15C>T, NM_178463.3:c.15C>T, NM_001302812.2:c.15C>T, NR_171007.1:n.794C>T, NM_001302812.1:c.15C>T, NR_029676.1:n.84C>T

Select item 78210520611.

rs782105206 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:62565002 (GRCh38)
20:61162209 (GRCh37)
Canonical SPDI:: NC_000020.11:62565001:T:C
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000028/1 (ALFA)
C=0.000026/7 (TOPMED)
C=0.000033/8 (GnomAD_exomes)
C=0.000034/3 (ExAC)
C=0.000036/5 (GnomAD)
HGVS:: NC_000020.11:g.62565002T>C, NW_003571063.2:g.108520T>C, NC_000020.10:g.61162209T>C, NM_178463.4:c.22T>C, NM_178463.3:c.22T>C, NM_001302812.2:c.22T>C, NR_171007.1:n.801T>C, NM_001302812.1:c.22T>C, NR_029676.1:n.91T>C

Select item 78208562712.

rs782085627 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 20:62564959 (GRCh38)
20:61162166 (GRCh37)
Canonical SPDI:: NC_000020.11:62564958:T:G
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0./0 (GnomAD)
G=0.000029/7 (GnomAD_exomes)
G=0.000043/4 (ExAC)
HGVS:: NC_000020.11:g.62564959T>G, NW_003571063.2:g.108477T>G, NC_000020.10:g.61162166T>G, NR_029676.1:n.48T>G

Select item 78196766513.

rs781967665 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 20:62564931 (GRCh38)
20:61162138 (GRCh37)
Canonical SPDI:: NC_000020.11:62564930:A:G
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000032/1 (ALFA)
G=0./0 (ExAC)
G=0.000004/1 (GnomAD_exomes)
G=0.000008/2 (TOPMED)
HGVS:: NC_000020.11:g.62564931A>G, NW_003571063.2:g.108449A>G, NC_000020.10:g.61162138A>G, NR_029676.1:n.20A>G

Select item 78192912014.

rs781929120 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 20:62564989 (GRCh38)
20:61162196 (GRCh37)
Canonical SPDI:: NC_000020.11:62564988:C:A
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0.000004/1 (GnomAD_exomes)
A=0.000011/1 (ExAC)
HGVS:: NC_000020.11:g.62564989C>A, NW_003571063.2:g.108507C>A, NC_000020.10:g.61162196C>A, NM_178463.4:c.9C>A, NM_178463.3:c.9C>A, NM_001302812.2:c.9C>A, NR_171007.1:n.788C>A, NM_001302812.1:c.9C>A, NR_029676.1:n.78C>A

Select item 78181810315.

rs781818103 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 20:62565010 (GRCh38)
20:61162217 (GRCh37)
Canonical SPDI:: NC_000020.11:62565009:G:A
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000056/2 (ALFA)
A=0.000008/2 (GnomAD_exomes)
A=0.000012/1 (ExAC)
A=0.000034/9 (TOPMED)
A=0.00005/7 (GnomAD)
HGVS:: NC_000020.11:g.62565010G>A, NW_003571063.2:g.108528G>A, NC_000020.10:g.61162217G>A, NM_178463.4:c.30G>A, NM_178463.3:c.30G>A, NM_001302812.2:c.30G>A, NR_171007.1:n.809G>A, NM_001302812.1:c.30G>A, NR_029676.1:n.99G>A

Select item 77659048416.

rs776590484 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 20:62565003 (GRCh38)
20:61162210 (GRCh37)
Canonical SPDI:: NC_000020.11:62565002:T:C
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000020.11:g.62565003T>C, NW_003571063.2:g.108521T>C, NC_000020.10:g.61162210T>C, NM_178463.4:c.23T>C, NM_178463.3:c.23T>C, NM_001302812.2:c.23T>C, NR_171007.1:n.802T>C, NM_001302812.1:c.23T>C, NR_029676.1:n.92T>C

Select item 56196276717.

rs561962767 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:62565011 (GRCh38)
20:61162218 (GRCh37)
Canonical SPDI:: NC_000020.11:62565010:C:T
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.000034/8 (GnomAD_exomes)
T=0.000096/8 (ExAC)
T=0.001002/1 (GoNL)
HGVS:: NC_000020.11:g.62565011C>T, NW_003571063.2:g.108529C>T, NC_000020.10:g.61162218C>T, NM_178463.4:c.31C>T, NM_178463.3:c.31C>T, NM_001302812.2:c.31C>T, NR_171007.1:n.810C>T, NM_001302812.1:c.31C>T, NR_029676.1:n.100C>T

Select item 55326792618.

rs553267926 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 20:62564984 (GRCh38)
20:61162191 (GRCh37)
Canonical SPDI:: NC_000020.11:62564983:A:C
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: C=0.000004/1 (GnomAD_exomes)
C=0.000156/1 (1000Genomes)
HGVS:: NC_000020.11:g.62564984A>C, NW_003571063.2:g.108502A>C, NC_000020.10:g.61162191A>C, NR_029676.1:n.73A>C

Select item 54131191719.

rs541311917 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 20:62564924 (GRCh38)
20:61162131 (GRCh37)
Canonical SPDI:: NC_000020.11:62564923:C:T
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000022/5 (GnomAD_exomes)
T=0.000025/2 (ExAC)
T=0.000156/1 (1000Genomes)
HGVS:: NC_000020.11:g.62564924C>T, NW_003571063.2:g.108442C>T, NC_000020.10:g.61162131C>T, NR_029676.1:n.13C>T

Select item 37022869820.

rs370228698 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 20:62565012 (GRCh38)
20:61162219 (GRCh37)
Canonical SPDI:: NC_000020.11:62565011:C:A,NC_000020.11:62565011:C:T
Gene:: MIR1-1HG (Varview), MIR133A2 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000246/11 (ALFA)
T=0.000114/16 (GnomAD)
T=0.000308/4 (GoESP)
HGVS:: NC_000020.11:g.62565012C>A, NC_000020.11:g.62565012C>T, NW_003571063.2:g.108530C>A, NW_003571063.2:g.108530C>T, NC_000020.10:g.61162219C>A, NC_000020.10:g.61162219C>T, NM_178463.4:c.32C>A, NM_178463.4:c.32C>T, NM_178463.3:c.32C>A, NM_178463.3:c.32C>T, NM_001302812.2:c.32C>A, NM_001302812.2:c.32C>T, NR_171007.1:n.811C>A, NR_171007.1:n.811C>T, NM_001302812.1:c.32C>A, NM_001302812.1:c.32C>T, NR_029676.1:n.101C>A, NR_029676.1:n.101C>T

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