SNP Links for Nucleotide (Select 262205421) - SNP

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Links from Nucleotide

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Select item 14839336941.

rs1483933694 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:79209827 (GRCh38)
15:79502169 (GRCh37)
Canonical SPDI:: NC_000015.10:79209826:T:C
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.79209827T>C, NC_000015.9:g.79502169T>C, NG_032125.1:g.5040T>C, NR_029705.1:n.40T>C

Select item 14320308002.

rs1432030800 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 15:79209862 (GRCh38)
15:79502204 (GRCh37)
Canonical SPDI:: NC_000015.10:79209861:A:G,NC_000015.10:79209861:A:T
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.79209862A>G, NC_000015.10:g.79209862A>T, NC_000015.9:g.79502204A>G, NC_000015.9:g.79502204A>T, NG_032125.1:g.5075A>G, NG_032125.1:g.5075A>T, NR_029705.1:n.75A>G, NR_029705.1:n.75A>T

Select item 13870115523.

rs1387011552 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 15:79209867 (GRCh38)
15:79502210 (GRCh37)
Canonical SPDI:: NC_000015.10:79209867:TT:TTT
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: TTT=0./0 (ALFA)
HGVS:: NC_000015.10:g.79209869dup, NC_000015.9:g.79502211dup, NG_032125.1:g.5082dup, NR_029705.1:n.82dup

Select item 13716594184.

rs1371659418 [Homo sapiens]

Variant type:: DEL
Alleles:: GT>- [Show Flanks]
Chromosome:: 15:79209860 (GRCh38)
15:79502202 (GRCh37)
Canonical SPDI:: NC_000015.10:79209859:GT:
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: -=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.79209860_79209861del, NC_000015.9:g.79502202_79502203del, NG_032125.1:g.5073_5074del, NR_029705.1:n.73_74del

Select item 12860949725.

rs1286094972 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:79209788 (GRCh38)
15:79502130 (GRCh37)
Canonical SPDI:: NC_000015.10:79209787:C:T
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.79209788C>T, NC_000015.9:g.79502130C>T, NG_032125.1:g.5001C>T, NR_029705.1:n.1C>T

Select item 12499107836.

rs1249910783 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:79209835 (GRCh38)
15:79502177 (GRCh37)
Canonical SPDI:: NC_000015.10:79209834:A:G
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0./0 (GnomAD)
G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.79209835A>G, NC_000015.9:g.79502177A>G, NG_032125.1:g.5048A>G, NR_029705.1:n.48A>G

Select item 12263020677.

rs1226302067 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:79209831 (GRCh38)
15:79502173 (GRCh37)
Canonical SPDI:: NC_000015.10:79209830:T:C
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000015.10:g.79209831T>C, NC_000015.9:g.79502173T>C, NG_032125.1:g.5044T>C, NR_029705.1:n.44T>C

Select item 12091426898.

rs1209142689 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 15:79209822 (GRCh38)
15:79502164 (GRCh37)
Canonical SPDI:: NC_000015.10:79209821:C:A
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.79209822C>A, NC_000015.9:g.79502164C>A, NG_032125.1:g.5035C>A, NR_029705.1:n.35C>A

Select item 12027054949.

rs1202705494 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 15:79209830 (GRCh38)
15:79502172 (GRCh37)
Canonical SPDI:: NC_000015.10:79209829:C:G,NC_000015.10:79209829:C:T
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000094/2 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
G=0.000035/1 (TOMMO)
HGVS:: NC_000015.10:g.79209830C>G, NC_000015.10:g.79209830C>T, NC_000015.9:g.79502172C>G, NC_000015.9:g.79502172C>T, NG_032125.1:g.5043C>G, NG_032125.1:g.5043C>T, NR_029705.1:n.43C>G, NR_029705.1:n.43C>T

Select item 118839943810.

rs1188399438 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:79209842 (GRCh38)
15:79502184 (GRCh37)
Canonical SPDI:: NC_000015.10:79209841:G:A
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.79209842G>A, NC_000015.9:g.79502184G>A, NG_032125.1:g.5055G>A, NR_029705.1:n.55G>A

Select item 116321829211.

rs1163218292 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 15:79209858 (GRCh38)
15:79502200 (GRCh37)
Canonical SPDI:: NC_000015.10:79209857:G:A,NC_000015.10:79209857:G:C
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.79209858G>A, NC_000015.10:g.79209858G>C, NC_000015.9:g.79502200G>A, NC_000015.9:g.79502200G>C, NG_032125.1:g.5071G>A, NG_032125.1:g.5071G>C, NR_029705.1:n.71G>A, NR_029705.1:n.71G>C

Select item 115902420612.

rs1159024206 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:79209851 (GRCh38)
15:79502193 (GRCh37)
Canonical SPDI:: NC_000015.10:79209850:C:T
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.79209851C>T, NC_000015.9:g.79502193C>T, NG_032125.1:g.5064C>T, NR_029705.1:n.64C>T

Select item 88944026813.

rs889440268 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:79209845 (GRCh38)
15:79502187 (GRCh37)
Canonical SPDI:: NC_000015.10:79209844:G:A
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.79209845G>A, NC_000015.9:g.79502187G>A, NG_032125.1:g.5058G>A, NR_029705.1:n.58G>A

Select item 77072702114.

rs770727021 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 15:79209848 (GRCh38)
15:79502191 (GRCh37)
Canonical SPDI:: NC_000015.10:79209848:AA:AAA
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: A=0.000004/1 (GnomAD_exomes)
A=0.000008/1 (ExAC)
HGVS:: NC_000015.10:g.79209850dup, NC_000015.9:g.79502192dup, NG_032125.1:g.5063dup, NR_029705.1:n.63dup

Select item 76190039215.

rs761900392 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:79209790 (GRCh38)
15:79502132 (GRCh37)
Canonical SPDI:: NC_000015.10:79209789:A:G
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
G=0.000008/1 (ExAC)
G=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000015.10:g.79209790A>G, NC_000015.9:g.79502132A>G, NG_032125.1:g.5003A>G, NR_029705.1:n.3A>G

Select item 76106169516.

rs761061695 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 15:79209798 (GRCh38)
15:79502140 (GRCh37)
Canonical SPDI:: NC_000015.10:79209797:C:A
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: A=0.000004/1 (GnomAD_exomes)
A=0.000008/1 (ExAC)
HGVS:: NC_000015.10:g.79209798C>A, NC_000015.9:g.79502140C>A, NG_032125.1:g.5011C>A, NR_029705.1:n.11C>A

Select item 75415858017.

rs754158580 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:79209800 (GRCh38)
15:79502142 (GRCh37)
Canonical SPDI:: NC_000015.10:79209799:C:T
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000017/2 (ExAC)
T=0.000024/6 (GnomAD_exomes)
HGVS:: NC_000015.10:g.79209800C>T, NC_000015.9:g.79502142C>T, NG_032125.1:g.5013C>T, NR_029705.1:n.13C>T

Select item 75122145718.

rs751221457 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:79209869 (GRCh38)
15:79502211 (GRCh37)
Canonical SPDI:: NC_000015.10:79209868:T:C
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000073/3 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000008/1 (ExAC)
C=0.000016/4 (GnomAD_exomes)
C=0.000021/3 (GnomAD)
HGVS:: NC_000015.10:g.79209869T>C, NC_000015.9:g.79502211T>C, NG_032125.1:g.5082T>C, NR_029705.1:n.82T>C

Select item 74876438319.

rs748764383 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ACGTC [Show Flanks]
Chromosome:: 15:79209790 (GRCh38)
15:79502133 (GRCh37)
Canonical SPDI:: NC_000015.10:79209790:GTCACGTC:GTCACGTCACGTC
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GTCACGTCACGTC=0.000087/2 (ALFA)
GTCAC=0.000017/2 (ExAC)
GTCAC=0.000048/12 (GnomAD_exomes)
GTCAC=0.000078/11 (GnomAD)
GTCAC=0.000091/24 (TOPMED)
HGVS:: NC_000015.10:g.79209794_79209798dup, NC_000015.9:g.79502136_79502140dup, NG_032125.1:g.5007_5011dup, NR_029705.1:n.7_11dup

Select item 37535507620.

rs375355076 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:79209839 (GRCh38)
15:79502181 (GRCh37)
Canonical SPDI:: NC_000015.10:79209838:T:C
Gene:: MIR184 (Varview), ANKRD34C-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Clinical significance:: uncertain-significance
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000134/6 (ALFA)
C=0./0 (ALSPAC)
C=0.000042/5 (ExAC)
C=0.000068/17 (GnomAD_exomes)
C=0.000097/1 (GoESP)
C=0.000117/31 (TOPMED)
C=0.000135/19 (GnomAD)
C=0.001348/5 (TWINSUK)
HGVS:: NC_000015.10:g.79209839T>C, NC_000015.9:g.79502181T>C, NG_032125.1:g.5052T>C, NR_029705.1:n.52T>C

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