SNP Links for Nucleotide (Select 262205644) - SNP

Links from Nucleotide

Items: 17

Select item 14845859071.

rs1484585907 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:91351199 (GRCh38)
13:92003453 (GRCh37)
Canonical SPDI:: NC_000013.11:91351198:C:T
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,upstream_transcript_variant,500B_downstream_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000013.11:g.91351199C>T, NC_000013.10:g.92003453C>T, NG_032702.1:g.8380C>T, NR_027350.1:n.1642C>T, NR_029490.1:n.8C>T, NM_213723.1:c.*798C>T

Select item 14350603662.

rs1435060366 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 13:91351231 (GRCh38)
13:92003485 (GRCh37)
Canonical SPDI:: NC_000013.11:91351230:G:A,NC_000013.11:91351230:G:T
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: 500B_downstream_variant,2KB_upstream_variant,non_coding_transcript_variant,intron_variant,downstream_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.91351231G>A, NC_000013.11:g.91351231G>T, NC_000013.10:g.92003485G>A, NC_000013.10:g.92003485G>T, NG_032702.1:g.8412G>A, NG_032702.1:g.8412G>T, NR_027350.1:n.1674G>A, NR_027350.1:n.1674G>T, NR_029490.1:n.40G>A, NR_029490.1:n.40G>T, NM_213723.1:c.*830G>A, NM_213723.1:c.*830G>T

Select item 13308452523.

rs1330845252 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:91351221 (GRCh38)
13:92003475 (GRCh37)
Canonical SPDI:: NC_000013.11:91351220:G:A
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000013.11:g.91351221G>A, NC_000013.10:g.92003475G>A, NG_032702.1:g.8402G>A, NR_027350.1:n.1664G>A, NR_029490.1:n.30G>A, NM_213723.1:c.*820G>A

Select item 13007564414.

rs1300756441 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 13:91351233 (GRCh38)
13:92003487 (GRCh37)
Canonical SPDI:: NC_000013.11:91351232:G:T
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: non_coding_transcript_variant,downstream_transcript_variant,500B_downstream_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.000008/2 (GnomAD_exomes)
T=0.000212/4 (TOMMO)
T=0.001092/2 (Korea1K)
T=0.001369/4 (KOREAN)
HGVS:: NC_000013.11:g.91351233G>T, NC_000013.10:g.92003487G>T, NG_032702.1:g.8414G>T, NR_027350.1:n.1676G>T, NR_029490.1:n.42G>T, NM_213723.1:c.*832G>T

Select item 12796888225.

rs1279688822 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 13:91351213 (GRCh38)
13:92003467 (GRCh37)
Canonical SPDI:: NC_000013.11:91351212:G:T
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,non_coding_transcript_variant,intron_variant,2KB_upstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.91351213G>T, NC_000013.10:g.92003467G>T, NG_032702.1:g.8394G>T, NR_027350.1:n.1656G>T, NR_029490.1:n.22G>T, NM_213723.1:c.*812G>T

Select item 12596337266.

rs1259633726 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 13:91351212 (GRCh38)
13:92003466 (GRCh37)
Canonical SPDI:: NC_000013.11:91351211:T:G
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,500B_downstream_variant,downstream_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.91351212T>G, NC_000013.10:g.92003466T>G, NG_032702.1:g.8393T>G, NR_027350.1:n.1655T>G, NR_029490.1:n.21T>G, NM_213723.1:c.*811T>G

Select item 12410556117.

rs1241055611 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:91351202 (GRCh38)
13:92003456 (GRCh37)
Canonical SPDI:: NC_000013.11:91351201:T:C
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,500B_downstream_variant,downstream_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.0002/1 (ALFA)
C=0.0002/1 (Estonian)
HGVS:: NC_000013.11:g.91351202T>C, NC_000013.10:g.92003456T>C, NG_032702.1:g.8383T>C, NR_027350.1:n.1645T>C, NR_029490.1:n.11T>C, NM_213723.1:c.*801T>C

Select item 7769659358.

rs776965935 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 13:91351236 (GRCh38)
13:92003490 (GRCh37)
Canonical SPDI:: NC_000013.11:91351235:A:T
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: non_coding_transcript_variant,500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.00002/5 (GnomAD_exomes)
T=0.000033/4 (ExAC)
HGVS:: NC_000013.11:g.91351236A>T, NC_000013.10:g.92003490A>T, NG_032702.1:g.8417A>T, NR_027350.1:n.1679A>T, NR_029490.1:n.45A>T, NM_213723.1:c.*835A>T

Select item 7712200509.

rs771220050 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:91351229 (GRCh38)
13:92003483 (GRCh37)
Canonical SPDI:: NC_000013.11:91351228:C:T
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: non_coding_transcript_variant,500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000008/1 (ExAC)
T=0.000012/3 (GnomAD_exomes)
HGVS:: NC_000013.11:g.91351229C>T, NC_000013.10:g.92003483C>T, NG_032702.1:g.8410C>T, NR_027350.1:n.1672C>T, NR_029490.1:n.38C>T, NM_213723.1:c.*828C>T

Select item 76534467310.

rs765344673 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:91351241 (GRCh38)
13:92003495 (GRCh37)
Canonical SPDI:: NC_000013.11:91351240:C:T
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: non_coding_transcript_variant,500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000057/15 (TOPMED)
T=0.000058/7 (ExAC)
T=0.000096/24 (GnomAD_exomes)
HGVS:: NC_000013.11:g.91351241C>T, NC_000013.10:g.92003495C>T, NG_032702.1:g.8422C>T, NR_027350.1:n.1684C>T, NR_029490.1:n.50C>T, NM_213723.1:c.*840C>T

Select item 76118496411.

rs761184964 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:91351203 (GRCh38)
13:92003457 (GRCh37)
Canonical SPDI:: NC_000013.11:91351202:G:A
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant,intron_variant,downstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0.000004/1 (GnomAD_exomes)
A=0.000008/1 (ExAC)
HGVS:: NC_000013.11:g.91351203G>A, NC_000013.10:g.92003457G>A, NG_032702.1:g.8384G>A, NR_027350.1:n.1646G>A, NR_029490.1:n.12G>A, NM_213723.1:c.*802G>A

Select item 75994254812.

rs759942548 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:91351239 (GRCh38)
13:92003493 (GRCh37)
Canonical SPDI:: NC_000013.11:91351238:T:C
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant,intron_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00018/8 (ALFA)
C=0.000057/8 (GnomAD)
C=0.000064/17 (TOPMED)
C=0.000074/9 (ExAC)
C=0.000076/19 (GnomAD_exomes)
HGVS:: NC_000013.11:g.91351239T>C, NC_000013.10:g.92003493T>C, NG_032702.1:g.8420T>C, NR_027350.1:n.1682T>C, NR_029490.1:n.48T>C, NM_213723.1:c.*838T>C

Select item 75299457813.

rs752994578 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:91351256 (GRCh38)
13:92003510 (GRCh37)
Canonical SPDI:: NC_000013.11:91351255:A:G
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant,intron_variant,downstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.000004/1 (GnomAD_exomes)
G=0.000008/1 (ExAC)
HGVS:: NC_000013.11:g.91351256A>G, NC_000013.10:g.92003510A>G, NG_032702.1:g.8437A>G, NR_027350.1:n.1699A>G, NR_029490.1:n.65A>G, NM_213723.1:c.*855A>G

Select item 75064216114.

rs750642161 [Homo sapiens]

Variant type:: DELINS
Alleles:: TG>- [Show Flanks]
Chromosome:: 13:91351271 (GRCh38)
13:92003525 (GRCh37)
Canonical SPDI:: NC_000013.11:91351268:TGTG:TG
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant,intron_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TGTG=0./0 (ALFA)
-=0.000008/1 (ExAC)
-=0.000012/3 (GnomAD_exomes)
HGVS:: NC_000013.11:g.91351269TG[1], NC_000013.10:g.92003523TG[1], NG_032702.1:g.8450TG[1], NR_027350.1:n.1712TG[1], NR_029490.1:n.78TG[1], NM_213723.1:c.*868TG[1]

Select item 37763238315.

rs377632383 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:91351258 (GRCh38)
13:92003512 (GRCh37)
Canonical SPDI:: NC_000013.11:91351257:G:A
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,500B_downstream_variant,intron_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000097/1 (GoESP)
HGVS:: NC_000013.11:g.91351258G>A, NC_000013.10:g.92003512G>A, NG_032702.1:g.8439G>A, NR_027350.1:n.1701G>A, NR_029490.1:n.67G>A, NM_213723.1:c.*857G>A

Select item 37627016216.

rs376270162 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 13:91351197 (GRCh38)
13:92003451 (GRCh37)
Canonical SPDI:: NC_000013.11:91351196:T:A
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,500B_downstream_variant,intron_variant,upstream_transcript_variant,non_coding_transcript_variant
HGVS:: NC_000013.11:g.91351197T>A, NC_000013.10:g.92003451T>A, NG_032702.1:g.8378T>A, NR_027350.1:n.1640T>A, NR_029490.1:n.6T>A, NM_213723.1:c.*796T>A

Select item 37421804917.

rs374218049 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:91351201 (GRCh38)
13:92003455 (GRCh37)
Canonical SPDI:: NC_000013.11:91351200:A:G
Gene:: MIR18A (Varview), MIR19A (Varview), MIR19B1 (Varview), MIR20A (Varview), MIR92A1 (Varview), MIR17HG (Varview)
Functional Consequence:: 2KB_upstream_variant,downstream_transcript_variant,500B_downstream_variant,intron_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.000004/1 (GnomAD_exomes)
G=0.000008/1 (ExAC)
G=0.000097/1 (GoESP)
G=0.001002/1 (GoNL)
HGVS:: NC_000013.11:g.91351201A>G, NC_000013.10:g.92003455A>G, NG_032702.1:g.8382A>G, NR_027350.1:n.1644A>G, NR_029490.1:n.10A>G, NM_213723.1:c.*800A>G

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Links from Nucleotide

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