SNP Links for Nucleotide (Select 262205812) - SNP

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Links from Nucleotide

Items: 1 to 20 of 23

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Select item 14349203251.

rs1434920325 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 9:124693740 (GRCh38)
9:127456019 (GRCh37)
Canonical SPDI:: NC_000009.12:124693739:C:A,NC_000009.12:124693739:C:T
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000035/1 (TOMMO)
HGVS:: NC_000009.12:g.124693740C>A, NC_000009.12:g.124693740C>T, NC_000009.11:g.127456019C>A, NC_000009.11:g.127456019C>T, NR_029782.1:n.31C>A, NR_029782.1:n.31C>T

Select item 14035854562.

rs1403585456 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:124693710 (GRCh38)
9:127455989 (GRCh37)
Canonical SPDI:: NC_000009.12:124693709:C:T
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000004/1 (TOPMED)
T=0.00006/1 (TOMMO)
HGVS:: NC_000009.12:g.124693710C>T, NC_000009.11:g.127455989C>T, NR_029782.1:n.1C>T

Select item 13737155993.

rs1373715599 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:124693750 (GRCh38)
9:127456029 (GRCh37)
Canonical SPDI:: NC_000009.12:124693749:G:A
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.124693750G>A, NC_000009.11:g.127456029G>A, NR_029782.1:n.41G>A

Select item 13727194754.

rs1372719475 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:124693774 (GRCh38)
9:127456053 (GRCh37)
Canonical SPDI:: NC_000009.12:124693773:A:G
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.124693774A>G, NC_000009.11:g.127456053A>G, NR_029782.1:n.65A>G

Select item 13516860165.

rs1351686016 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 9:124693736 (GRCh38)
9:127456015 (GRCh37)
Canonical SPDI:: NC_000009.12:124693735:C:G,NC_000009.12:124693735:C:T
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.124693736C>G, NC_000009.12:g.124693736C>T, NC_000009.11:g.127456015C>G, NC_000009.11:g.127456015C>T, NR_029782.1:n.27C>G, NR_029782.1:n.27C>T

Select item 12155312556.

rs1215531255 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 9:124693785 (GRCh38)
9:127456064 (GRCh37)
Canonical SPDI:: NC_000009.12:124693784:C:G
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: G=0.00004/1 (TOMMO)
HGVS:: NC_000009.12:g.124693785C>G, NC_000009.11:g.127456064C>G, NR_029782.1:n.76C>G

Select item 11666139277.

rs1166613927 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 9:124693723 (GRCh38)
9:127456002 (GRCh37)
Canonical SPDI:: NC_000009.12:124693722:T:G
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.124693723T>G, NC_000009.11:g.127456002T>G, NR_029782.1:n.14T>G

Select item 10322591778.

rs1032259177 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 9:124693754 (GRCh38)
9:127456033 (GRCh37)
Canonical SPDI:: NC_000009.12:124693753:C:G
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
HGVS:: NC_000009.12:g.124693754C>G, NC_000009.11:g.127456033C>G, NR_029782.1:n.45C>G

Select item 10219388569.

rs1021938856 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:124693711 (GRCh38)
9:127455990 (GRCh37)
Canonical SPDI:: NC_000009.12:124693710:T:C
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
HGVS:: NC_000009.12:g.124693711T>C, NC_000009.11:g.127455990T>C, NR_029782.1:n.2T>C

Select item 95489791310.

rs954897913 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:124693755 (GRCh38)
9:127456034 (GRCh37)
Canonical SPDI:: NC_000009.12:124693754:T:A
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.124693755T>A, NC_000009.11:g.127456034T>A, NR_029782.1:n.46T>A

Select item 78126000811.

rs781260008 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 9:124693757 (GRCh38)
9:127456036 (GRCh37)
Canonical SPDI:: NC_000009.12:124693756:A:T
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.000008/1 (ExAC)
HGVS:: NC_000009.12:g.124693757A>T, NC_000009.11:g.127456036A>T, NR_029782.1:n.48A>T

Select item 76571290512.

rs765712905 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 9:124693731 (GRCh38)
9:127456010 (GRCh37)
Canonical SPDI:: NC_000009.12:124693730:C:G,NC_000009.12:124693730:C:T
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.124693731C>G, NC_000009.12:g.124693731C>T, NC_000009.11:g.127456010C>G, NC_000009.11:g.127456010C>T, NR_029782.1:n.22C>G, NR_029782.1:n.22C>T

Select item 76267658613.

rs762676586 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:124693775 (GRCh38)
9:127456054 (GRCh37)
Canonical SPDI:: NC_000009.12:124693774:T:C
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000031/1 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
C=0.000032/8 (GnomAD_exomes)
C=0.000052/6 (ExAC)
HGVS:: NC_000009.12:g.124693775T>C, NC_000009.11:g.127456054T>C, NR_029782.1:n.66T>C

Select item 75872658114.

rs758726581 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:124693733 (GRCh38)
9:127456012 (GRCh37)
Canonical SPDI:: NC_000009.12:124693732:T:C
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: C=0.000008/2 (GnomAD_exomes)
C=0.000017/2 (ExAC)
HGVS:: NC_000009.12:g.124693733T>C, NC_000009.11:g.127456012T>C, NR_029782.1:n.24T>C

Select item 75498528915.

rs754985289 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:124693743 (GRCh38)
9:127456022 (GRCh37)
Canonical SPDI:: NC_000009.12:124693742:T:C
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000087/2 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000025/3 (ExAC)
C=0.000052/13 (GnomAD_exomes)
HGVS:: NC_000009.12:g.124693743T>C, NC_000009.11:g.127456022T>C, NR_029782.1:n.34T>C

Select item 55675768116.

rs556757681 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:124693732 (GRCh38)
9:127456011 (GRCh37)
Canonical SPDI:: NC_000009.12:124693731:A:G
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
G=0.001002/1 (GoNL)
HGVS:: NC_000009.12:g.124693732A>G, NC_000009.11:g.127456011A>G, NR_029782.1:n.23A>G

Select item 55643541917.

rs556435419 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 9:124693788 (GRCh38)
9:127456067 (GRCh37)
Canonical SPDI:: NC_000009.12:124693787:C:A,NC_000009.12:124693787:C:T
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000047/1 (ALFA)
T=0.000004/1 (GnomAD_exomes)
A=0.000007/1 (GnomAD)
T=0.000009/1 (ExAC)
T=0.000312/2 (1000Genomes)
HGVS:: NC_000009.12:g.124693788C>A, NC_000009.12:g.124693788C>T, NC_000009.11:g.127456067C>A, NC_000009.11:g.127456067C>T, NR_029782.1:n.79C>A, NR_029782.1:n.79C>T

Select item 54318996318.

rs543189963 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:124693741 (GRCh38)
9:127456020 (GRCh37)
Canonical SPDI:: NC_000009.12:124693740:G:A
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
A=0.000017/2 (ExAC)
A=0.000032/8 (GnomAD_exomes)
A=0.000156/1 (1000Genomes)
HGVS:: NC_000009.12:g.124693741G>A, NC_000009.11:g.127456020G>A, NR_029782.1:n.32G>A

Select item 53618531019.

rs536185310 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:124693763 (GRCh38)
9:127456042 (GRCh37)
Canonical SPDI:: NC_000009.12:124693762:C:T
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: T=0.0002/1 (1000Genomes)
HGVS:: NC_000009.12:g.124693763C>T, NC_000009.11:g.127456042C>T, NR_029782.1:n.54C>T

Select item 37475952020.

rs374759520 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,T [Show Flanks]
Chromosome:: 9:124693784 (GRCh38)
9:127456063 (GRCh37)
Canonical SPDI:: NC_000009.12:124693783:A:C,NC_000009.12:124693783:A:T
Gene:: NR6A1 (Varview), MIR181B2 (Varview), MIR181A2HG (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000214/3 (ALFA)
C=0.000062/7 (ExAC)
C=0.00025/35 (GnomAD)
C=0.000257/68 (TOPMED)
C=0.000291/3 (GoESP)
HGVS:: NC_000009.12:g.124693784A>C, NC_000009.12:g.124693784A>T, NC_000009.11:g.127456063A>C, NC_000009.11:g.127456063A>T, NR_029782.1:n.75A>C, NR_029782.1:n.75A>T