SNP Links for Nucleotide (Select 262206283) - SNP

Links from Nucleotide

Items: 1 to 20 of 36

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Select item 14379409461.

rs1437940946 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:101023393 (GRCh38)
14:101489730 (GRCh37)
Canonical SPDI:: NC_000014.9:101023392:A:G
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000014.9:g.101023393A>G, NC_000014.8:g.101489730A>G, NG_045000.6:g.192125A>G, XM_047432049.1:c.*2589A>G, NR_030389.1:n.69A>G

Select item 13952914872.

rs1395291487 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:101023339 (GRCh38)
14:101489676 (GRCh37)
Canonical SPDI:: NC_000014.9:101023338:A:G
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.101023339A>G, NC_000014.8:g.101489676A>G, NG_045000.6:g.192071A>G, XM_047432049.1:c.*2535A>G, NR_030389.1:n.15A>G

Select item 13613696573.

rs1361369657 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 14:101023352 (GRCh38)
14:101489690 (GRCh37)
Canonical SPDI:: NC_000014.9:101023352:A:AA
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: 2KB_upstream_variant,3_prime_UTR_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: AA=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000014.9:g.101023353dup, NC_000014.8:g.101489690dup, NG_045000.6:g.192085dup, XM_047432049.1:c.*2549dup, NR_030389.1:n.29dup

Select item 13539020154.

rs1353902015 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:101023380 (GRCh38)
14:101489717 (GRCh37)
Canonical SPDI:: NC_000014.9:101023379:A:G
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: 2KB_upstream_variant,3_prime_UTR_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: G=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000014.9:g.101023380A>G, NC_000014.8:g.101489717A>G, NG_045000.6:g.192112A>G, XM_047432049.1:c.*2576A>G, NR_030389.1:n.56A>G

Select item 13504327335.

rs1350432733 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 14:101023338 (GRCh38)
14:101489675 (GRCh37)
Canonical SPDI:: NC_000014.9:101023337:G:C
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: 2KB_upstream_variant,3_prime_UTR_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.101023338G>C, NC_000014.8:g.101489675G>C, NG_045000.6:g.192070G>C, XM_047432049.1:c.*2534G>C, NR_030389.1:n.14G>C

Select item 12858823326.

rs1285882332 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 14:101023382 (GRCh38)
14:101489719 (GRCh37)
Canonical SPDI:: NC_000014.9:101023381:C:A
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.101023382C>A, NC_000014.8:g.101489719C>A, NG_045000.6:g.192114C>A, XM_047432049.1:c.*2578C>A, NR_030389.1:n.58C>A

Select item 12814891957.

rs1281489195 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTT [Show Flanks]
Chromosome:: 14:101023329 (GRCh38)
14:101489667 (GRCh37)
Canonical SPDI:: NC_000014.9:101023329:CTT:CTTCTT
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,3_prime_UTR_variant,2KB_upstream_variant
HGVS:: NC_000014.9:g.101023330_101023332dup, NC_000014.8:g.101489667_101489669dup, NG_045000.6:g.192062_192064dup, XM_047432049.1:c.*2526_*2528dup, NR_030389.1:n.6_8dup

Select item 12540121778.

rs1254012177 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:101023328 (GRCh38)
14:101489665 (GRCh37)
Canonical SPDI:: NC_000014.9:101023327:T:C
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000014.9:g.101023328T>C, NC_000014.8:g.101489665T>C, NG_045000.6:g.192060T>C, XM_047432049.1:c.*2524T>C, NR_030389.1:n.4T>C

Select item 11656496189.

rs1165649618 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:101023341 (GRCh38)
14:101489678 (GRCh37)
Canonical SPDI:: NC_000014.9:101023340:A:G
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000014.9:g.101023341A>G, NC_000014.8:g.101489678A>G, NG_045000.6:g.192073A>G, XM_047432049.1:c.*2537A>G, NR_030389.1:n.17A>G

Select item 115761257010.

rs1157612570 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 14:101023345 (GRCh38)
14:101489682 (GRCh37)
Canonical SPDI:: NC_000014.9:101023344:G:C
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.101023345G>C, NC_000014.8:g.101489682G>C, NG_045000.6:g.192077G>C, XM_047432049.1:c.*2541G>C, NR_030389.1:n.21G>C

Select item 78055977911.

rs780559779 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:101023359 (GRCh38)
14:101489696 (GRCh37)
Canonical SPDI:: NC_000014.9:101023358:C:T
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000028/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
T=0.000028/7 (GnomAD_exomes)
T=0.000033/4 (ExAC)
HGVS:: NC_000014.9:g.101023359C>T, NC_000014.8:g.101489696C>T, NG_045000.6:g.192091C>T, XM_047432049.1:c.*2555C>T, NR_030389.1:n.35C>T

Select item 77210633412.

rs772106334 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 14:101023390 (GRCh38)
14:101489727 (GRCh37)
Canonical SPDI:: NC_000014.9:101023389:A:T
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by cluster
MAF:: T=0.000008/2 (GnomAD_exomes)
T=0.000017/2 (ExAC)
HGVS:: NC_000014.9:g.101023390A>T, NC_000014.8:g.101489727A>T, NG_045000.6:g.192122A>T, XM_047432049.1:c.*2586A>T, NR_030389.1:n.66A>T

Select item 76828544313.

rs768285443 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:101023374 (GRCh38)
14:101489711 (GRCh37)
Canonical SPDI:: NC_000014.9:101023373:G:A
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
A=0.000008/1 (ExAC)
HGVS:: NC_000014.9:g.101023374G>A, NC_000014.8:g.101489711G>A, NG_045000.6:g.192106G>A, XM_047432049.1:c.*2570G>A, NR_030389.1:n.50G>A

Select item 76549203514.

rs765492035 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:101023331 (GRCh38)
14:101489668 (GRCh37)
Canonical SPDI:: NC_000014.9:101023330:T:C
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by cluster
MAF:: C=0.000008/1 (ExAC)
HGVS:: NC_000014.9:g.101023331T>C, NC_000014.8:g.101489668T>C, NG_045000.6:g.192063T>C, XM_047432049.1:c.*2527T>C, NR_030389.1:n.7T>C

Select item 76533593315.

rs765335933 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 14:101023399 (GRCh38)
14:101489736 (GRCh37)
Canonical SPDI:: NC_000014.9:101023398:C:A,NC_000014.9:101023398:C:T
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/1 (ExAC)
HGVS:: NC_000014.9:g.101023399C>A, NC_000014.9:g.101023399C>T, NC_000014.8:g.101489736C>A, NC_000014.8:g.101489736C>T, NG_045000.6:g.192131C>A, NG_045000.6:g.192131C>T, XM_047432049.1:c.*2595C>A, XM_047432049.1:c.*2595C>T, NR_030389.1:n.75C>A, NR_030389.1:n.75C>T

Select item 76454490916.

rs764544909 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:101023354 (GRCh38)
14:101489691 (GRCh37)
Canonical SPDI:: NC_000014.9:101023353:G:A
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by cluster
MAF:: A=0.000004/1 (GnomAD_exomes)
A=0.000008/1 (ExAC)
HGVS:: NC_000014.9:g.101023354G>A, NC_000014.8:g.101489691G>A, NG_045000.6:g.192086G>A, XM_047432049.1:c.*2550G>A, NR_030389.1:n.30G>A

Select item 76429617117.

rs764296171 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:101023416 (GRCh38)
14:101489753 (GRCh37)
Canonical SPDI:: NC_000014.9:101023415:C:T
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000031/1 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000008/1 (ExAC)
T=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.101023416C>T, NC_000014.8:g.101489753C>T, NG_045000.6:g.192148C>T, XM_047432049.1:c.*2612C>T, NR_030389.1:n.92C>T

Select item 76317845518.

rs763178455 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 14:101023415 (GRCh38)
14:101489752 (GRCh37)
Canonical SPDI:: NC_000014.9:101023414:C:A,NC_000014.9:101023414:C:T
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
A=0.000007/1 (GnomAD)
T=0.000008/1 (ExAC)
A=0.000071/2 (TOMMO)
HGVS:: NC_000014.9:g.101023415C>A, NC_000014.9:g.101023415C>T, NC_000014.8:g.101489752C>A, NC_000014.8:g.101489752C>T, NG_045000.6:g.192147C>A, NG_045000.6:g.192147C>T, XM_047432049.1:c.*2611C>A, XM_047432049.1:c.*2611C>T, NR_030389.1:n.91C>A, NR_030389.1:n.91C>T

Select item 75965639919.

rs759656399 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 14:101023395 (GRCh38)
14:101489732 (GRCh37)
Canonical SPDI:: NC_000014.9:101023394:C:A
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
A=0.000008/1 (ExAC)
HGVS:: NC_000014.9:g.101023395C>A, NC_000014.8:g.101489732C>A, NG_045000.6:g.192127C>A, XM_047432049.1:c.*2591C>A, NR_030389.1:n.71C>A

Select item 75872617920.

rs758726179 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:101023349 (GRCh38)
14:101489686 (GRCh37)
Canonical SPDI:: NC_000014.9:101023348:G:A
Gene:: MIR299 (Varview), MIR380 (Varview), MIR411 (Varview), LOC124903407 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000012/3 (GnomAD_exomes)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
A=0.000017/2 (ExAC)
HGVS:: NC_000014.9:g.101023349G>A, NC_000014.8:g.101489686G>A, NG_045000.6:g.192081G>A, XM_047432049.1:c.*2545G>A, NR_030389.1:n.25G>A

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