SNP Links for Nucleotide (Select 262331568) - SNP - NCBI

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Links from Nucleotide

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Select item 14886647881.

rs1488664788 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:72195411 (GRCh38)
11:71906455 (GRCh37)
Canonical SPDI:: NC_000011.10:72195410:C:T
Gene:: FOLR1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Clinical significance:: likely-benign
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.72195411C>T, NC_000011.9:g.71906455C>T, NG_015863.1:g.10854C>T, NM_016724.3:c.309C>T, NM_016724.2:c.309C>T, NM_016725.3:c.309C>T, NM_016725.2:c.309C>T, NM_000802.3:c.309C>T, NM_016729.3:c.309C>T, NM_016729.2:c.309C>T, NM_016731.2:c.309C>T, NM_016730.1:c.309C>T, NM_016731.1:c.309C>T

Select item 14884605202.

rs1488460520 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:72192321 (GRCh38)
11:71903365 (GRCh37)
Canonical SPDI:: NC_000011.10:72192320:G:A
Gene:: FOLR1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000028/1 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.72192321G>A, NC_000011.9:g.71903365G>A, NG_015863.1:g.7764G>A, NM_016724.3:c.148G>A, NM_016724.2:c.148G>A, NM_016725.3:c.148G>A, NM_016725.2:c.148G>A, NM_000802.3:c.148G>A, NM_016729.3:c.148G>A, NM_016729.2:c.148G>A, NM_016731.2:c.148G>A, NM_016730.1:c.148G>A, NM_016731.1:c.148G>A, NP_057936.1:p.Glu50Lys, NP_057937.1:p.Glu50Lys, NP_000793.1:p.Glu50Lys, NP_057941.1:p.Glu50Lys

Select item 14838576473.

rs1483857647 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 11:72192285 (GRCh38)
11:71903329 (GRCh37)
Canonical SPDI:: NC_000011.10:72192284:A:C,NC_000011.10:72192284:A:G
Gene:: FOLR1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.72192285A>C, NC_000011.10:g.72192285A>G, NC_000011.9:g.71903329A>C, NC_000011.9:g.71903329A>G, NG_015863.1:g.7728A>C, NG_015863.1:g.7728A>G, NM_016724.3:c.112A>C, NM_016724.3:c.112A>G, NM_016724.2:c.112A>C, NM_016724.2:c.112A>G, NM_016725.3:c.112A>C, NM_016725.3:c.112A>G, NM_016725.2:c.112A>C, NM_016725.2:c.112A>G, NM_000802.3:c.112A>C, NM_000802.3:c.112A>G, NM_016729.3:c.112A>C, NM_016729.3:c.112A>G, NM_016729.2:c.112A>C, NM_016729.2:c.112A>G, NM_016731.2:c.112A>C, NM_016731.2:c.112A>G, NM_016730.1:c.112A>C, NM_016730.1:c.112A>G, NM_016731.1:c.112A>C, NM_016731.1:c.112A>G, NP_057936.1:p.Met38Leu, NP_057936.1:p.Met38Val, NP_057937.1:p.Met38Leu, NP_057937.1:p.Met38Val, NP_000793.1:p.Met38Leu, NP_000793.1:p.Met38Val, NP_057941.1:p.Met38Leu, NP_057941.1:p.Met38Val

Select item 14838114254.

rs1483811425 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:72196132 (GRCh38)
11:71907176 (GRCh37)
Canonical SPDI:: NC_000011.10:72196131:T:C
Gene:: FOLR1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.72196132T>C, NC_000011.9:g.71907176T>C, NG_015863.1:g.11575T>C, NM_016724.3:c.729T>C, NM_016724.2:c.729T>C, NM_016725.3:c.729T>C, NM_016725.2:c.729T>C, NM_000802.3:c.729T>C, NM_016729.3:c.729T>C, NM_016729.2:c.729T>C, NM_016731.2:c.729T>C, NM_016730.1:c.729T>C, NM_016731.1:c.729T>C

Select item 14813774775.

rs1481377477 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:72196137 (GRCh38)
11:71907181 (GRCh37)
Canonical SPDI:: NC_000011.10:72196136:T:G
Gene:: FOLR1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.72196137T>G, NC_000011.9:g.71907181T>G, NG_015863.1:g.11580T>G, NM_016724.3:c.734T>G, NM_016724.2:c.734T>G, NM_016725.3:c.734T>G, NM_016725.2:c.734T>G, NM_000802.3:c.734T>G, NM_016729.3:c.734T>G, NM_016729.2:c.734T>G, NM_016731.2:c.734T>G, NM_016730.1:c.734T>G, NM_016731.1:c.734T>G, NP_057936.1:p.Leu245Arg, NP_057937.1:p.Leu245Arg, NP_000793.1:p.Leu245Arg, NP_057941.1:p.Leu245Arg

Select item 14798052296.

rs1479805229 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:72196131 (GRCh38)
11:71907175 (GRCh37)
Canonical SPDI:: NC_000011.10:72196130:C:G,NC_000011.10:72196130:C:T
Gene:: FOLR1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by cluster
MAF:: G=0.000004/1 (GnomAD_exomes)
T=0.000035/1 (TOMMO)
HGVS:: NC_000011.10:g.72196131C>G, NC_000011.10:g.72196131C>T, NC_000011.9:g.71907175C>G, NC_000011.9:g.71907175C>T, NG_015863.1:g.11574C>G, NG_015863.1:g.11574C>T, NM_016724.3:c.728C>G, NM_016724.3:c.728C>T, NM_016724.2:c.728C>G, NM_016724.2:c.728C>T, NM_016725.3:c.728C>G, NM_016725.3:c.728C>T, NM_016725.2:c.728C>G, NM_016725.2:c.728C>T, NM_000802.3:c.728C>G, NM_000802.3:c.728C>T, NM_016729.3:c.728C>G, NM_016729.3:c.728C>T, NM_016729.2:c.728C>G, NM_016729.2:c.728C>T, NM_016731.2:c.728C>G, NM_016731.2:c.728C>T, NM_016730.1:c.728C>G, NM_016730.1:c.728C>T, NM_016731.1:c.728C>G, NM_016731.1:c.728C>T, NP_057936.1:p.Pro243Arg, NP_057936.1:p.Pro243Leu, NP_057937.1:p.Pro243Arg, NP_057937.1:p.Pro243Leu, NP_000793.1:p.Pro243Arg, NP_000793.1:p.Pro243Leu, NP_057941.1:p.Pro243Arg, NP_057941.1:p.Pro243Leu

Select item 14774679417.

rs1477467941 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:72192288 (GRCh38)
11:71903332 (GRCh37)
Canonical SPDI:: NC_000011.10:72192287:A:T
Gene:: FOLR1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.72192288A>T, NC_000011.9:g.71903332A>T, NG_015863.1:g.7731A>T, NM_016724.3:c.115A>T, NM_016724.2:c.115A>T, NM_016725.3:c.115A>T, NM_016725.2:c.115A>T, NM_000802.3:c.115A>T, NM_016729.3:c.115A>T, NM_016729.2:c.115A>T, NM_016731.2:c.115A>T, NM_016730.1:c.115A>T, NM_016731.1:c.115A>T, NP_057936.1:p.Asn39Tyr, NP_057937.1:p.Asn39Tyr, NP_000793.1:p.Asn39Tyr, NP_057941.1:p.Asn39Tyr

Select item 14759333348.

rs1475933334 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:72195938 (GRCh38)
11:71906982 (GRCh37)
Canonical SPDI:: NC_000011.10:72195937:C:T
Gene:: FOLR1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000066/1 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000223/1 (Estonian)
HGVS:: NC_000011.10:g.72195938C>T, NC_000011.9:g.71906982C>T, NG_015863.1:g.11381C>T, NM_016724.3:c.535C>T, NM_016724.2:c.535C>T, NM_016725.3:c.535C>T, NM_016725.2:c.535C>T, NM_000802.3:c.535C>T, NM_016729.3:c.535C>T, NM_016729.2:c.535C>T, NM_016731.2:c.535C>T, NM_016730.1:c.535C>T, NM_016731.1:c.535C>T, NP_057936.1:p.His179Tyr, NP_057937.1:p.His179Tyr, NP_000793.1:p.His179Tyr, NP_057941.1:p.His179Tyr

Select item 14725896489.

rs1472589648 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:72196051 (GRCh38)
11:71907095 (GRCh37)
Canonical SPDI:: NC_000011.10:72196050:A:G
Gene:: FOLR1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000028/1 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.72196051A>G, NC_000011.9:g.71907095A>G, NG_015863.1:g.11494A>G, NM_016724.3:c.648A>G, NM_016724.2:c.648A>G, NM_016725.3:c.648A>G, NM_016725.2:c.648A>G, NM_000802.3:c.648A>G, NM_016729.3:c.648A>G, NM_016729.2:c.648A>G, NM_016731.2:c.648A>G, NM_016730.1:c.648A>G, NM_016731.1:c.648A>G

Select item 147091493810.

rs1470914938 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:72192316 (GRCh38)
11:71903360 (GRCh37)
Canonical SPDI:: NC_000011.10:72192315:G:A
Gene:: FOLR1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.72192316G>A, NC_000011.9:g.71903360G>A, NG_015863.1:g.7759G>A, NM_016724.3:c.143G>A, NM_016724.2:c.143G>A, NM_016725.3:c.143G>A, NM_016725.2:c.143G>A, NM_000802.3:c.143G>A, NM_016729.3:c.143G>A, NM_016729.2:c.143G>A, NM_016731.2:c.143G>A, NM_016730.1:c.143G>A, NM_016731.1:c.143G>A, NP_057936.1:p.Gly48Asp, NP_057937.1:p.Gly48Asp, NP_000793.1:p.Gly48Asp, NP_057941.1:p.Gly48Asp

Select item 145861433811.

rs1458614338 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:72196322 (GRCh38)
11:71907366 (GRCh37)
Canonical SPDI:: NC_000011.10:72196321:G:A
Gene:: FOLR1 (Varview)
Functional Consequence:: downstream_transcript_variant,genic_downstream_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.72196322G>A, NC_000011.9:g.71907366G>A, NG_015863.1:g.11765G>A, NM_000802.3:c.*145G>A, NM_016724.2:c.*145G>A, NM_016725.2:c.*145G>A, NM_016729.2:c.*145G>A, NM_016731.2:c.*145G>A, NM_016731.1:c.*145G>A

Select item 145440684812.

rs1454406848 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:72196002 (GRCh38)
11:71907046 (GRCh37)
Canonical SPDI:: NC_000011.10:72196001:G:A
Gene:: FOLR1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.72196002G>A, NC_000011.9:g.71907046G>A, NG_015863.1:g.11445G>A, NM_016724.3:c.599G>A, NM_016724.2:c.599G>A, NM_016725.3:c.599G>A, NM_016725.2:c.599G>A, NM_000802.3:c.599G>A, NM_016729.3:c.599G>A, NM_016729.2:c.599G>A, NM_016731.2:c.599G>A, NM_016730.1:c.599G>A, NM_016731.1:c.599G>A, NP_057936.1:p.Ser200Asn, NP_057937.1:p.Ser200Asn, NP_000793.1:p.Ser200Asn, NP_057941.1:p.Ser200Asn

Select item 144728362513.

rs1447283625 [Homo sapiens]

Variant type:: DEL
Alleles:: AGTT>- [Show Flanks]
Chromosome:: 11:72192328 (GRCh38)
11:71903372 (GRCh37)
Canonical SPDI:: NC_000011.10:72192327:AGTT:
Gene:: FOLR1 (Varview)
Functional Consequence:: frameshift_variant,coding_sequence_variant
Validated:: by frequency
MAF:: -=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.72192328_72192331del, NC_000011.9:g.71903372_71903375del, NG_015863.1:g.7771_7774del, NM_016724.3:c.155_158del, NM_016724.2:c.155_158del, NM_016725.3:c.155_158del, NM_016725.2:c.155_158del, NM_000802.3:c.155_158del, NM_016729.3:c.155_158del, NM_016729.2:c.155_158del, NM_016731.2:c.155_158del, NM_016730.1:c.155_158del, NM_016731.1:c.155_158del, NP_057936.1:p.Lys52fs, NP_057937.1:p.Lys52fs, NP_000793.1:p.Lys52fs, NP_057941.1:p.Lys52fs

Select item 144335643114.

rs1443356431 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:72196274 (GRCh38)
11:71907318 (GRCh37)
Canonical SPDI:: NC_000011.10:72196273:C:A
Gene:: FOLR1 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.72196274C>A, NC_000011.9:g.71907318C>A, NG_015863.1:g.11717C>A, NM_016724.3:c.*97C>A, NM_016724.2:c.*97C>A, NM_016725.3:c.*97C>A, NM_016725.2:c.*97C>A, NM_000802.3:c.*97C>A, NM_016729.3:c.*97C>A, NM_016729.2:c.*97C>A, NM_016731.2:c.*97C>A, NM_016730.1:c.*97C>A, NM_016731.1:c.*97C>A

Select item 143818055015.

rs1438180550 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 11:72195714 (GRCh38)
11:71906758 (GRCh37)
Canonical SPDI:: NC_000011.10:72195713:A:C
Gene:: FOLR1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.72195714A>C, NC_000011.9:g.71906758A>C, NG_015863.1:g.11157A>C, NM_016724.3:c.460A>C, NM_016724.2:c.460A>C, NM_016725.3:c.460A>C, NM_016725.2:c.460A>C, NM_000802.3:c.460A>C, NM_016729.3:c.460A>C, NM_016729.2:c.460A>C, NM_016731.2:c.460A>C, NM_016730.1:c.460A>C, NM_016731.1:c.460A>C, NP_057936.1:p.Ser154Arg, NP_057937.1:p.Ser154Arg, NP_000793.1:p.Ser154Arg, NP_057941.1:p.Ser154Arg

Select item 143805112016.

rs1438051120 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:72195717 (GRCh38)
11:71906761 (GRCh37)
Canonical SPDI:: NC_000011.10:72195716:A:G
Gene:: FOLR1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.72195717A>G, NC_000011.9:g.71906761A>G, NG_015863.1:g.11160A>G, NM_016724.3:c.463A>G, NM_016724.2:c.463A>G, NM_016725.3:c.463A>G, NM_016725.2:c.463A>G, NM_000802.3:c.463A>G, NM_016729.3:c.463A>G, NM_016729.2:c.463A>G, NM_016731.2:c.463A>G, NM_016730.1:c.463A>G, NM_016731.1:c.463A>G, NP_057936.1:p.Asn155Asp, NP_057937.1:p.Asn155Asp, NP_000793.1:p.Asn155Asp, NP_057941.1:p.Asn155Asp

Select item 143711792617.

rs1437117926 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:72196312 (GRCh38)
11:71907356 (GRCh37)
Canonical SPDI:: NC_000011.10:72196311:G:T
Gene:: FOLR1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,downstream_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.72196312G>T, NC_000011.9:g.71907356G>T, NG_015863.1:g.11755G>T, NM_000802.3:c.*135G>T, NM_016724.2:c.*135G>T, NM_016725.2:c.*135G>T, NM_016729.2:c.*135G>T, NM_016731.2:c.*135G>T, NM_016731.1:c.*135G>T

Select item 143071482518.

rs1430714825 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:72195444 (GRCh38)
11:71906488 (GRCh37)
Canonical SPDI:: NC_000011.10:72195443:G:A
Gene:: FOLR1 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000028/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
A=0.00002/5 (GnomAD_exomes)
HGVS:: NC_000011.10:g.72195444G>A, NC_000011.9:g.71906488G>A, NG_015863.1:g.10887G>A, NM_016724.3:c.342G>A, NM_016724.2:c.342G>A, NM_016725.3:c.342G>A, NM_016725.2:c.342G>A, NM_000802.3:c.342G>A, NM_016729.3:c.342G>A, NM_016729.2:c.342G>A, NM_016731.2:c.342G>A, NM_016730.1:c.342G>A, NM_016731.1:c.342G>A

Select item 142414178219.

rs1424141782 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:72196147 (GRCh38)
11:71907191 (GRCh37)
Canonical SPDI:: NC_000011.10:72196146:G:T
Gene:: FOLR1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.72196147G>T, NC_000011.9:g.71907191G>T, NG_015863.1:g.11590G>T, NM_016724.3:c.744G>T, NM_016724.2:c.744G>T, NM_016725.3:c.744G>T, NM_016725.2:c.744G>T, NM_000802.3:c.744G>T, NM_016729.3:c.744G>T, NM_016729.2:c.744G>T, NM_016731.2:c.744G>T, NM_016730.1:c.744G>T, NM_016731.1:c.744G>T

Select item 142236000720.

rs1422360007 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:72195420 (GRCh38)
11:71906464 (GRCh37)
Canonical SPDI:: NC_000011.10:72195419:C:T
Gene:: FOLR1 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000011.10:g.72195420C>T, NC_000011.9:g.71906464C>T, NG_015863.1:g.10863C>T, NM_016724.3:c.318C>T, NM_016724.2:c.318C>T, NM_016725.3:c.318C>T, NM_016725.2:c.318C>T, NM_000802.3:c.318C>T, NM_016729.3:c.318C>T, NM_016729.2:c.318C>T, NM_016731.2:c.318C>T, NM_016730.1:c.318C>T, NM_016731.1:c.318C>T

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