SNP Links for Nucleotide (Select 269847197) - SNP

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Links from Nucleotide

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Select item 14908807221.

rs1490880722 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:113582968 (GRCh38)
2:114340545 (GRCh37)
Canonical SPDI:: NC_000002.12:113582967:T:C
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
HGVS:: NC_000002.12:g.113582968T>C, NC_000002.11:g.114340545T>C, XR_007087203.1:n.1079A>G, XR_007087204.1:n.1063A>G, NR_031632.1:n.129A>G

Select item 14872883162.

rs1487288316 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 2:113583092 (GRCh38)
2:114340669 (GRCh37)
Canonical SPDI:: NC_000002.12:113583091:C:A,NC_000002.12:113583091:C:T
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000002.12:g.113583092C>A, NC_000002.12:g.113583092C>T, NC_000002.11:g.114340669C>A, NC_000002.11:g.114340669C>T, XR_007087203.1:n.955G>T, XR_007087203.1:n.955G>A, XR_007087204.1:n.939G>T, XR_007087204.1:n.939G>A, NR_031632.1:n.5G>T, NR_031632.1:n.5G>A

Select item 14832822893.

rs1483282289 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:113582964 (GRCh38)
2:114340541 (GRCh37)
Canonical SPDI:: NC_000002.12:113582963:T:C
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.113582964T>C, NC_000002.11:g.114340541T>C, XR_007087203.1:n.1083A>G, XR_007087204.1:n.1067A>G, NR_031632.1:n.133A>G

Select item 14798575584.

rs1479857558 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 2:113583010 (GRCh38)
2:114340587 (GRCh37)
Canonical SPDI:: NC_000002.12:113583009:A:C
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
HGVS:: NC_000002.12:g.113583010A>C, NC_000002.11:g.114340587A>C, XR_007087203.1:n.1037T>G, XR_007087204.1:n.1021T>G, NR_031632.1:n.87T>G

Select item 14769404755.

rs1476940475 [Homo sapiens]

Variant type:: INS
Alleles:: ->AACTGGGAGAGGGAGAGAG [Show Flanks]
Chromosome:: 2:113582977 (GRCh38)
2:114340555 (GRCh37)
Canonical SPDI:: NC_000002.12:113582977::AACTGGGAGAGGGAGAGAG
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
HGVS:: NC_000002.12:g.113582977_113582978insAACTGGGAGAGGGAGAGAG, NC_000002.11:g.114340554_114340555insAACTGGGAGAGGGAGAGAG, XR_007087203.1:n.1069_1070insCTCTCTCCCTCTCCCAGTT, XR_007087204.1:n.1053_1054insCTCTCTCCCTCTCCCAGTT, NR_031632.1:n.119_120insCTCTCTCCCTCTCCCAGTT

Select item 14588395326.

rs1458839532 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 2:113583006 (GRCh38)
2:114340583 (GRCh37)
Canonical SPDI:: NC_000002.12:113583005:T:A,NC_000002.12:113583005:T:C
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000002.12:g.113583006T>A, NC_000002.12:g.113583006T>C, NC_000002.11:g.114340583T>A, NC_000002.11:g.114340583T>C, XR_007087203.1:n.1041A>T, XR_007087203.1:n.1041A>G, XR_007087204.1:n.1025A>T, XR_007087204.1:n.1025A>G, NR_031632.1:n.91A>T, NR_031632.1:n.91A>G

Select item 14477400627.

rs1447740062 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 2:113582990 (GRCh38)
2:114340567 (GRCh37)
Canonical SPDI:: NC_000002.12:113582989:A:C
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: C=0.000012/3 (GnomAD_exomes)
HGVS:: NC_000002.12:g.113582990A>C, NC_000002.11:g.114340567A>C, XR_007087203.1:n.1057T>G, XR_007087204.1:n.1041T>G, NR_031632.1:n.107T>G

Select item 14425572608.

rs1442557260 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 2:113582963 (GRCh38)
2:114340540 (GRCh37)
Canonical SPDI:: NC_000002.12:113582962:A:C
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.00046/8 (TOMMO)
C=0.00055/1 (Korea1K)
HGVS:: NC_000002.12:g.113582963A>C, NC_000002.11:g.114340540A>C, XR_007087203.1:n.1084T>G, XR_007087204.1:n.1068T>G, NR_031632.1:n.134T>G

Select item 14419832119.

rs1441983211 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 2:113582971 (GRCh38)
2:114340548 (GRCh37)
Canonical SPDI:: NC_000002.12:113582970:T:G
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.113582971T>G, NC_000002.11:g.114340548T>G, XR_007087203.1:n.1076A>C, XR_007087204.1:n.1060A>C, NR_031632.1:n.126A>C

Select item 143690344310.

rs1436903443 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:113582980 (GRCh38)
2:114340557 (GRCh37)
Canonical SPDI:: NC_000002.12:113582979:T:C
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000002.12:g.113582980T>C, NC_000002.11:g.114340557T>C, XR_007087203.1:n.1067A>G, XR_007087204.1:n.1051A>G, NR_031632.1:n.117A>G

Select item 141873819011.

rs1418738190 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 2:113583087 (GRCh38)
2:114340664 (GRCh37)
Canonical SPDI:: NC_000002.12:113583086:C:G
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000002.12:g.113583087C>G, NC_000002.11:g.114340664C>G, XR_007087203.1:n.960G>C, XR_007087204.1:n.944G>C, NR_031632.1:n.10G>C

Select item 141761212312.

rs1417612123 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:113583069 (GRCh38)
2:114340646 (GRCh37)
Canonical SPDI:: NC_000002.12:113583068:A:G
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000002.12:g.113583069A>G, NC_000002.11:g.114340646A>G, XR_007087203.1:n.978T>C, XR_007087204.1:n.962T>C, NR_031632.1:n.28T>C

Select item 140724602413.

rs1407246024 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:113583070 (GRCh38)
2:114340647 (GRCh37)
Canonical SPDI:: NC_000002.12:113583069:T:C
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000002.12:g.113583070T>C, NC_000002.11:g.114340647T>C, XR_007087203.1:n.977A>G, XR_007087204.1:n.961A>G, NR_031632.1:n.27A>G

Select item 140005212014.

rs1400052120 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:113583091 (GRCh38)
2:114340668 (GRCh37)
Canonical SPDI:: NC_000002.12:113583090:G:A
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000002.12:g.113583091G>A, NC_000002.11:g.114340668G>A, XR_007087203.1:n.956C>T, XR_007087204.1:n.940C>T, NR_031632.1:n.6C>T

Select item 138003588615.

rs1380035886 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 2:113582975 (GRCh38)
2:114340552 (GRCh37)
Canonical SPDI:: NC_000002.12:113582974:G:A,NC_000002.12:113582974:G:T
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000002.12:g.113582975G>A, NC_000002.12:g.113582975G>T, NC_000002.11:g.114340552G>A, NC_000002.11:g.114340552G>T, XR_007087203.1:n.1072C>T, XR_007087203.1:n.1072C>A, XR_007087204.1:n.1056C>T, XR_007087204.1:n.1056C>A, NR_031632.1:n.122C>T, NR_031632.1:n.122C>A

Select item 137227040616.

rs1372270406 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 2:113582992 (GRCh38)
2:114340569 (GRCh37)
Canonical SPDI:: NC_000002.12:113582991:C:G,NC_000002.12:113582991:C:T
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0.00005/1 (ALFA)
HGVS:: NC_000002.12:g.113582992C>G, NC_000002.12:g.113582992C>T, NC_000002.11:g.114340569C>G, NC_000002.11:g.114340569C>T, XR_007087203.1:n.1055G>C, XR_007087203.1:n.1055G>A, XR_007087204.1:n.1039G>C, XR_007087204.1:n.1039G>A, NR_031632.1:n.105G>C, NR_031632.1:n.105G>A

Select item 136824495017.

rs1368244950 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 2:113583042 (GRCh38)
2:114340619 (GRCh37)
Canonical SPDI:: NC_000002.12:113583041:T:A,NC_000002.12:113583041:T:G
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by cluster
MAF:: G=0.00004/1 (TOMMO)
HGVS:: NC_000002.12:g.113583042T>A, NC_000002.12:g.113583042T>G, NC_000002.11:g.114340619T>A, NC_000002.11:g.114340619T>G, XR_007087203.1:n.1005A>T, XR_007087203.1:n.1005A>C, XR_007087204.1:n.989A>T, XR_007087204.1:n.989A>C, NR_031632.1:n.55A>T, NR_031632.1:n.55A>C

Select item 135987900518.

rs1359879005 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:113582984 (GRCh38)
2:114340561 (GRCh37)
Canonical SPDI:: NC_000002.12:113582983:A:G
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
HGVS:: NC_000002.12:g.113582984A>G, NC_000002.11:g.114340561A>G, XR_007087203.1:n.1063T>C, XR_007087204.1:n.1047T>C, NR_031632.1:n.113T>C

Select item 135377747419.

rs1353777474 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:113583032 (GRCh38)
2:114340609 (GRCh37)
Canonical SPDI:: NC_000002.12:113583031:T:C
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.113583032T>C, NC_000002.11:g.114340609T>C, XR_007087203.1:n.1015A>G, XR_007087204.1:n.999A>G, NR_031632.1:n.65A>G

Select item 135018594720.

rs1350185947 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 2:113583080 (GRCh38)
2:114340657 (GRCh37)
Canonical SPDI:: NC_000002.12:113583079:A:C,NC_000002.12:113583079:A:G
Gene:: WASH2P (Varview), MIR1302-3 (Varview), LOC124907875 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
HGVS:: NC_000002.12:g.113583080A>C, NC_000002.12:g.113583080A>G, NC_000002.11:g.114340657A>C, NC_000002.11:g.114340657A>G, XR_007087203.1:n.967T>G, XR_007087203.1:n.967T>C, XR_007087204.1:n.951T>G, XR_007087204.1:n.951T>C, NR_031632.1:n.17T>G, NR_031632.1:n.17T>C

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