SNP Links for Nucleotide (Select 269847412) - SNP

Links from Nucleotide

Items: 1 to 20 of 32

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Select item 14691234931.

rs1469123493 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:85770565 (GRCh38)
15:86313796 (GRCh37)
Canonical SPDI:: NC_000015.10:85770564:T:C
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000029/4 (GnomAD)
HGVS:: NC_000015.10:g.85770565T>C, NC_000015.9:g.86313796T>C, NR_031682.1:n.14A>G

Select item 14625403432.

rs1462540343 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 15:85770568 (GRCh38)
15:86313799 (GRCh37)
Canonical SPDI:: NC_000015.10:85770567:C:A
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: A=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000015.10:g.85770568C>A, NC_000015.9:g.86313799C>A, NR_031682.1:n.11G>T

Select item 14268653813.

rs1426865381 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 15:85770504 (GRCh38)
15:86313735 (GRCh37)
Canonical SPDI:: NC_000015.10:85770503:T:A
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.85770504T>A, NC_000015.9:g.86313735T>A, NR_031682.1:n.75A>T

Select item 13920654574.

rs1392065457 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 15:85770510 (GRCh38)
15:86313741 (GRCh37)
Canonical SPDI:: NC_000015.10:85770509:C:A
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: A=0.000012/3 (GnomAD_exomes)
HGVS:: NC_000015.10:g.85770510C>A, NC_000015.9:g.86313741C>A, NR_031682.1:n.69G>T

Select item 13664113875.

rs1366411387 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:85770501 (GRCh38)
15:86313732 (GRCh37)
Canonical SPDI:: NC_000015.10:85770500:C:T
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000015.10:g.85770501C>T, NC_000015.9:g.86313732C>T, NR_031682.1:n.78G>A

Select item 13090178306.

rs1309017830 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:85770515 (GRCh38)
15:86313746 (GRCh37)
Canonical SPDI:: NC_000015.10:85770514:G:A
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
HGVS:: NC_000015.10:g.85770515G>A, NC_000015.9:g.86313746G>A, NR_031682.1:n.64C>T

Select item 13000267367.

rs1300026736 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:85770577 (GRCh38)
15:86313808 (GRCh37)
Canonical SPDI:: NC_000015.10:85770576:G:A
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
HGVS:: NC_000015.10:g.85770577G>A, NC_000015.9:g.86313808G>A, NR_031682.1:n.2C>T

Select item 11970804508.

rs1197080450 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 15:85770545 (GRCh38)
15:86313776 (GRCh37)
Canonical SPDI:: NC_000015.10:85770544:A:C
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.00002/5 (GnomAD_exomes)
C=0.000029/4 (GnomAD)
C=0.000045/12 (TOPMED)
HGVS:: NC_000015.10:g.85770545A>C, NC_000015.9:g.86313776A>C, NR_031682.1:n.34T>G

Select item 9497167439.

rs949716743 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:85770550 (GRCh38)
15:86313781 (GRCh37)
Canonical SPDI:: NC_000015.10:85770549:T:C
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
HGVS:: NC_000015.10:g.85770550T>C, NC_000015.9:g.86313781T>C, NR_031682.1:n.29A>G

Select item 89544540310.

rs895445403 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:85770543 (GRCh38)
15:86313774 (GRCh37)
Canonical SPDI:: NC_000015.10:85770542:C:T
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000015.10:g.85770543C>T, NC_000015.9:g.86313774C>T, NR_031682.1:n.36G>A

Select item 89240337811.

rs892403378 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 15:85770576 (GRCh38)
15:86313807 (GRCh37)
Canonical SPDI:: NC_000015.10:85770575:G:A,NC_000015.10:85770575:G:T
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000015.10:g.85770576G>A, NC_000015.10:g.85770576G>T, NC_000015.9:g.86313807G>A, NC_000015.9:g.86313807G>T, NR_031682.1:n.3C>T, NR_031682.1:n.3C>A

Select item 77991441212.

rs779914412 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 15:85770509 (GRCh38)
15:86313740 (GRCh37)
Canonical SPDI:: NC_000015.10:85770508:G:C
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.000009/1 (ExAC)
HGVS:: NC_000015.10:g.85770509G>C, NC_000015.9:g.86313740G>C, NR_031682.1:n.70C>G

Select item 77584396013.

rs775843960 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 15:85770561 (GRCh38)
15:86313792 (GRCh37)
Canonical SPDI:: NC_000015.10:85770560:C:A,NC_000015.10:85770560:C:T
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: T=0.0003/2 (1000Genomes)
HGVS:: NC_000015.10:g.85770561C>A, NC_000015.10:g.85770561C>T, NC_000015.9:g.86313792C>A, NC_000015.9:g.86313792C>T, NR_031682.1:n.18G>T, NR_031682.1:n.18G>A

Select item 77158951814.

rs771589518 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 15:85770546 (GRCh38)
15:86313777 (GRCh37)
Canonical SPDI:: NC_000015.10:85770545:G:A,NC_000015.10:85770545:G:T
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: A=0.000004/1 (GnomAD_exomes)
A=0.000009/1 (ExAC)
HGVS:: NC_000015.10:g.85770546G>A, NC_000015.10:g.85770546G>T, NC_000015.9:g.86313777G>A, NC_000015.9:g.86313777G>T, NR_031682.1:n.33C>T, NR_031682.1:n.33C>A

Select item 76974405215.

rs769744052 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 15:85770560 (GRCh38)
15:86313791 (GRCh37)
Canonical SPDI:: NC_000015.10:85770559:G:A
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000009/1 (ExAC)
A=0.000019/5 (TOPMED)
A=0.000029/7 (GnomAD_exomes)
HGVS:: NC_000015.10:g.85770560G>A, NC_000015.9:g.86313791G>A, NR_031682.1:n.19C>T

Select item 76729199716.

rs767291997 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 15:85770499 (GRCh38)
15:86313730 (GRCh37)
Canonical SPDI:: NC_000015.10:85770498:C:T
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000085/3 (ALFA)
T=0.000018/2 (ExAC)
T=0.000033/8 (GnomAD_exomes)
T=0.000036/5 (GnomAD)
T=0.000045/12 (TOPMED)
T=0.001873/1 (MGP)
HGVS:: NC_000015.10:g.85770499C>T, NC_000015.9:g.86313730C>T, NR_031682.1:n.80G>A

Select item 76423940017.

rs764239400 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 15:85770562 (GRCh38)
15:86313793 (GRCh37)
Canonical SPDI:: NC_000015.10:85770561:T:C
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (GnomAD_exomes)
C=0.000009/1 (ExAC)
HGVS:: NC_000015.10:g.85770562T>C, NC_000015.9:g.86313793T>C, NR_031682.1:n.17A>G

Select item 76042047218.

rs760420472 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 15:85770578 (GRCh38)
15:86313809 (GRCh37)
Canonical SPDI:: NC_000015.10:85770577:G:A,NC_000015.10:85770577:G:T
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
T=0.000037/9 (GnomAD_exomes)
T=0.000059/6 (ExAC)
HGVS:: NC_000015.10:g.85770578G>A, NC_000015.10:g.85770578G>T, NC_000015.9:g.86313809G>A, NC_000015.9:g.86313809G>T, NR_031682.1:n.1C>T, NR_031682.1:n.1C>A

Select item 75970423019.

rs759704230 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 15:85770557 (GRCh38)
15:86313788 (GRCh37)
Canonical SPDI:: NC_000015.10:85770556:A:G
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: G=0.000004/1 (GnomAD_exomes)
G=0.000009/1 (ExAC)
HGVS:: NC_000015.10:g.85770557A>G, NC_000015.9:g.86313788A>G, NR_031682.1:n.22T>C

Select item 75780575420.

rs757805754 has merged into rs34381260 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>-,TT [Show Flanks]
Chromosome:: 15:85770564 (GRCh38)
15:86313795 (GRCh37)
Canonical SPDI:: NC_000015.10:85770563:TTT:TT,NC_000015.10:85770563:TTT:TTTT
Gene:: KLHL25 (Varview), MIR1276 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: -=0.000007/1 (GnomAD)
-=0.000016/4 (GnomAD_exomes)
-=0.000038/4 (ExAC)
HGVS:: NC_000015.10:g.85770566del, NC_000015.10:g.85770566dup, NC_000015.9:g.86313797del, NC_000015.9:g.86313797dup, NR_031682.1:n.15del, NR_031682.1:n.15dup

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