SNP Links for Nucleotide (Select 294345472) - SNP

Links from Nucleotide

Items: 1 to 20 of 595

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Select item 14903088141.

rs1490308814 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: 14:55137842 (GRCh38)
14:55604560 (GRCh37)
Canonical SPDI:: NC_000014.9:55137841:AAA:AA
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: AA=0.000071/1 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.55137844del, NC_000014.8:g.55604562del, NG_017089.1:g.13628del, NR_003225.2:n.862del, NM_194327.1:c.*177del

Select item 14888205402.

rs1488820540 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 14:55137813 (GRCh38)
14:55604531 (GRCh37)
Canonical SPDI:: NC_000014.9:55137812:C:A
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.55137813C>A, NC_000014.8:g.55604531C>A, NG_017089.1:g.13597C>A, NR_003225.2:n.831C>A, NM_194327.1:c.*146C>A

Select item 14874820503.

rs1487482050 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 14:55138003 (GRCh38)
14:55604721 (GRCh37)
Canonical SPDI:: NC_000014.9:55138002:G:C
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.55138003G>C, NC_000014.8:g.55604721G>C, NG_017089.1:g.13787G>C, NR_003225.2:n.1021G>C, NM_194327.1:c.*336G>C

Select item 14833853084.

rs1483385308 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 14:55138124 (GRCh38)
14:55604842 (GRCh37)
Canonical SPDI:: NC_000014.9:55138123:C:A
Gene:: LGALS3 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,5_prime_UTR_variant,missense_variant
HGVS:: NC_000014.9:g.55138124C>A, NC_000014.8:g.55604842C>A, NG_017089.1:g.13908C>A, NM_002306.4:c.98C>A, NM_002306.3:c.98C>A, NR_003225.2:n.1142C>A, NM_001357678.2:c.140C>A, NM_001357678.1:c.140C>A, XM_047431367.1:c.140C>A, NM_194327.1:c.*457C>A, XM_047431368.1:c.140C>A, XM_047431369.1:c.-290C>A, NM_001177388.1:c.98C>A, NP_002297.2:p.Ala33Glu, NP_001344607.1:p.Ala47Glu, XP_047287323.1:p.Ala47Glu, XP_047287324.1:p.Ala47Glu

Select item 14812339725.

rs1481233972 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GGGGCAGTTAGTGGGGACAG [Show Flanks]
Chromosome:: 14:55137096 (GRCh38)
14:55603815 (GRCh37)
Canonical SPDI:: NC_000014.9:55137096:GGGGCAGTTAGTGGGGACAG:GGGGCAGTTAGTGGGGACAGGGGGCAGTTAGTGGGGACAG
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: GGGGCAGTTAGTGGGGACAGGGGGCAGTTAGTGGGGACAG=0./0 (ALFA)
GGGGCAGTTAGTGGGGACAG=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.55137097_55137116dup, NC_000014.8:g.55603815_55603834dup, NG_017089.1:g.12881_12900dup, NR_003225.2:n.115_134dup, NM_194327.1:c.-275_-256dup

Select item 14803683856.

rs1480368385 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 14:55138189 (GRCh38)
14:55604907 (GRCh37)
Canonical SPDI:: NC_000014.9:55138188:C:A,NC_000014.9:55138188:C:T
Gene:: LGALS3 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,5_prime_UTR_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
T=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.55138189C>A, NC_000014.9:g.55138189C>T, NC_000014.8:g.55604907C>A, NC_000014.8:g.55604907C>T, NG_017089.1:g.13973C>A, NG_017089.1:g.13973C>T, NM_002306.4:c.163C>A, NM_002306.4:c.163C>T, NM_002306.3:c.163C>A, NM_002306.3:c.163C>T, NR_003225.2:n.1207C>A, NR_003225.2:n.1207C>T, NM_001357678.2:c.205C>A, NM_001357678.2:c.205C>T, NM_001357678.1:c.205C>A, NM_001357678.1:c.205C>T, XM_047431367.1:c.205C>A, XM_047431367.1:c.205C>T, NM_194327.1:c.*522C>A, NM_194327.1:c.*522C>T, XM_047431368.1:c.205C>A, XM_047431368.1:c.205C>T, XM_047431369.1:c.-225C>A, XM_047431369.1:c.-225C>T, NM_001177388.1:c.163C>A, NM_001177388.1:c.163C>T, NP_002297.2:p.Pro55Thr, NP_002297.2:p.Pro55Ser, NP_001344607.1:p.Pro69Thr, NP_001344607.1:p.Pro69Ser, XP_047287323.1:p.Pro69Thr, XP_047287323.1:p.Pro69Ser, XP_047287324.1:p.Pro69Thr, XP_047287324.1:p.Pro69Ser

Select item 14802890717.

rs1480289071 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 14:55142736 (GRCh38)
14:55609454 (GRCh37)
Canonical SPDI:: NC_000014.9:55142735:G:C
Gene:: LGALS3 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,missense_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000014.9:g.55142736G>C, NC_000014.8:g.55609454G>C, NG_017089.1:g.18520G>C, NM_002306.4:c.584G>C, NM_002306.3:c.584G>C, NR_003225.2:n.1628G>C, NM_001357678.2:c.626G>C, NM_001357678.1:c.626G>C, XM_047431367.1:c.626G>C, NM_194327.1:c.*943G>C, XM_047431368.1:c.626G>C, XM_047431369.1:c.197G>C, NP_002297.2:p.Gly195Ala, NP_001344607.1:p.Gly209Ala, XP_047287323.1:p.Gly209Ala, XP_047287324.1:p.Gly209Ala, XP_047287325.1:p.Gly66Ala

Select item 14802222688.

rs1480222268 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 14:55137970 (GRCh38)
14:55604688 (GRCh37)
Canonical SPDI:: NC_000014.9:55137969:A:G,NC_000014.9:55137969:A:T
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000014.9:g.55137970A>G, NC_000014.9:g.55137970A>T, NC_000014.8:g.55604688A>G, NC_000014.8:g.55604688A>T, NG_017089.1:g.13754A>G, NG_017089.1:g.13754A>T, NR_003225.2:n.988A>G, NR_003225.2:n.988A>T, NM_194327.1:c.*303A>G, NM_194327.1:c.*303A>T

Select item 14800759169.

rs1480075916 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:55137091 (GRCh38)
14:55603809 (GRCh37)
Canonical SPDI:: NC_000014.9:55137090:G:A
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000014.9:g.55137091G>A, NC_000014.8:g.55603809G>A, NG_017089.1:g.12875G>A, NR_003225.2:n.109G>A, NM_194327.1:c.-281G>A

Select item 147873240910.

rs1478732409 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>- [Show Flanks]
Chromosome:: 14:55137454 (GRCh38)
14:55604172 (GRCh37)
Canonical SPDI:: NC_000014.9:55137451:TTTT:TT
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
-=0.000425/7 (TOMMO)
HGVS:: NC_000014.9:g.55137454_55137455del, NC_000014.8:g.55604172_55604173del, NG_017089.1:g.13238_13239del, NR_003225.2:n.472_473del, NM_194327.1:c.81_82del

Select item 147612082611.

rs1476120826 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 14:55145379 (GRCh38)
14:55612097 (GRCh37)
Canonical SPDI:: NC_000014.9:55145378:T:A
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant
HGVS:: NC_000014.9:g.55145379T>A, NC_000014.8:g.55612097T>A, NG_017089.1:g.21163T>A, NM_002306.4:c.*108T>A, NM_002306.3:c.*108T>A, NR_003225.2:n.1905T>A, NM_001357678.2:c.*108T>A, NM_001357678.1:c.*108T>A, XM_047431367.1:c.*108T>A, NM_194327.1:c.*1220T>A, XM_047431368.1:c.*108T>A, XM_047431369.1:c.*108T>A, NM_001177388.1:c.588T>A

Select item 147446829512.

rs1474468295 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:55145292 (GRCh38)
14:55612010 (GRCh37)
Canonical SPDI:: NC_000014.9:55145291:A:G
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.55145292A>G, NC_000014.8:g.55612010A>G, NG_017089.1:g.21076A>G, NM_002306.4:c.*21A>G, NM_002306.3:c.*21A>G, NR_003225.2:n.1818A>G, NM_001357678.2:c.*21A>G, NM_001357678.1:c.*21A>G, XM_047431367.1:c.*21A>G, NM_194327.1:c.*1133A>G, XM_047431368.1:c.*21A>G, XM_047431369.1:c.*21A>G

Select item 147446764713.

rs1474467647 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 14:55145286 (GRCh38)
14:55612005 (GRCh37)
Canonical SPDI:: NC_000014.9:55145286:TT:TTT
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: TTT=0./0 (ALFA)
HGVS:: NC_000014.9:g.55145288dup, NC_000014.8:g.55612006dup, NG_017089.1:g.21072dup, NM_002306.4:c.*17dup, NM_002306.3:c.*17dup, NR_003225.2:n.1814dup, NM_001357678.2:c.*17dup, NM_001357678.1:c.*17dup, XM_047431367.1:c.*17dup, NM_194327.1:c.*1129dup, XM_047431368.1:c.*17dup, XM_047431369.1:c.*17dup

Select item 147383857714.

rs1473838577 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 14:55137556 (GRCh38)
14:55604274 (GRCh37)
Canonical SPDI:: NC_000014.9:55137555:C:A
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.0002/1 (ALFA)
A=0.0002/1 (Estonian)
HGVS:: NC_000014.9:g.55137556C>A, NC_000014.8:g.55604274C>A, NG_017089.1:g.13340C>A, NR_003225.2:n.574C>A, NM_194327.1:c.183C>A

Select item 147276774915.

rs1472767749 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:55138343 (GRCh38)
14:55605061 (GRCh37)
Canonical SPDI:: NC_000014.9:55138342:C:T
Gene:: LGALS3 (Varview)
Functional Consequence:: 5_prime_UTR_variant,non_coding_transcript_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000014.9:g.55138343C>T, NC_000014.8:g.55605061C>T, NG_017089.1:g.14127C>T, NM_002306.4:c.317C>T, NM_002306.3:c.317C>T, NR_003225.2:n.1361C>T, NM_001357678.2:c.359C>T, NM_001357678.1:c.359C>T, XM_047431367.1:c.359C>T, NM_194327.1:c.*676C>T, XM_047431368.1:c.359C>T, XM_047431369.1:c.-71C>T, NM_001177388.1:c.317C>T, NP_002297.2:p.Pro106Leu, NP_001344607.1:p.Pro120Leu, XP_047287323.1:p.Pro120Leu, XP_047287324.1:p.Pro120Leu

Select item 147225326016.

rs1472253260 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 14:55138130 (GRCh38)
14:55604848 (GRCh37)
Canonical SPDI:: NC_000014.9:55138129:G:T
Gene:: LGALS3 (Varview)
Functional Consequence:: 5_prime_UTR_variant,non_coding_transcript_variant,missense_variant,coding_sequence_variant
HGVS:: NC_000014.9:g.55138130G>T, NC_000014.8:g.55604848G>T, NG_017089.1:g.13914G>T, NM_002306.4:c.104G>T, NM_002306.3:c.104G>T, NR_003225.2:n.1148G>T, NM_001357678.2:c.146G>T, NM_001357678.1:c.146G>T, XM_047431367.1:c.146G>T, NM_194327.1:c.*463G>T, XM_047431368.1:c.146G>T, XM_047431369.1:c.-284G>T, NM_001177388.1:c.104G>T, NP_002297.2:p.Gly35Val, NP_001344607.1:p.Gly49Val, XP_047287323.1:p.Gly49Val, XP_047287324.1:p.Gly49Val

Select item 146998562217.

rs1469985622 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:55137826 (GRCh38)
14:55604544 (GRCh37)
Canonical SPDI:: NC_000014.9:55137825:G:A
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.55137826G>A, NC_000014.8:g.55604544G>A, NG_017089.1:g.13610G>A, NR_003225.2:n.844G>A, NM_194327.1:c.*159G>A

Select item 146918037418.

rs1469180374 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:55145271 (GRCh38)
14:55611989 (GRCh37)
Canonical SPDI:: NC_000014.9:55145270:A:G
Gene:: LGALS3 (Varview)
Functional Consequence:: synonymous_variant,terminator_codon_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.55145271A>G, NC_000014.8:g.55611989A>G, NG_017089.1:g.21055A>G, NM_002306.4:c.753A>G, NM_002306.3:c.753A>G, NR_003225.2:n.1797A>G, NM_001357678.2:c.795A>G, NM_001357678.1:c.795A>G, XM_047431367.1:c.795A>G, NM_194327.1:c.*1112A>G, XM_047431368.1:c.795A>G, XM_047431369.1:c.366A>G

Select item 146624541219.

rs1466245412 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 14:55137141 (GRCh38)
14:55603859 (GRCh37)
Canonical SPDI:: NC_000014.9:55137140:C:
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency
MAF:: -=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.55137141del, NC_000014.8:g.55603859del, NG_017089.1:g.12925del, NR_003225.2:n.159del, NM_194327.1:c.-231del

Select item 146415099420.

rs1464150994 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:55137157 (GRCh38)
14:55603875 (GRCh37)
Canonical SPDI:: NC_000014.9:55137156:G:A
Gene:: LGALS3 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
A=0.000026/7 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000014.9:g.55137157G>A, NC_000014.8:g.55603875G>A, NG_017089.1:g.12941G>A, NR_003225.2:n.175G>A, NM_194327.1:c.-217G>A

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