SNP Links for Nucleotide (Select 296531471) - SNP

Links from Nucleotide

Items: 1 to 20 of 2416

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Select item 14913371231.

rs1491337123 [Homo sapiens]

Variant type:: DEL
Alleles:: GA>- [Show Flanks]
Chromosome:: X:13044320 (GRCh38)
X:13062439 (GRCh37)
Canonical SPDI:: NC_000023.11:13044319:GA:
Gene:: FAM9C (Varview), LOC105373133 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,frameshift_variant,2KB_upstream_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.00368/41 (TOMMO)
HGVS:: NC_000023.11:g.13044320_13044321del, NC_000023.10:g.13062439_13062440del, NG_021290.1:g.5478_5479del, XM_024452348.2:c.122_123del, XP_024308116.2:p.Val41fs

Select item 14910187692.

rs1491018769 has merged into rs936158241 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>-,TATA [Show Flanks]
Chromosome:: X:13034444 (GRCh38)
X:13052563 (GRCh37)
Canonical SPDI:: NC_000023.11:13034436:ATATATATA:ATATATA,NC_000023.11:13034436:ATATATATA:ATATATATATA
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATATATA=0./0 (ALFA)
-=0.00005/1 (TOMMO)
HGVS:: NC_000023.11:g.13034438TA[3], NC_000023.11:g.13034438TA[5], NC_000023.10:g.13052557TA[3], NC_000023.10:g.13052557TA[5], NG_021290.1:g.15355AT[3], NG_021290.1:g.15355AT[5]

Select item 14908217023.

rs1490821702 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:13034793 (GRCh38)
X:13052912 (GRCh37)
Canonical SPDI:: NC_000023.11:13034792:T:C
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000142/2 (ALFA)
C=0.000034/9 (TOPMED)
C=0.000038/4 (GnomAD)
HGVS:: NC_000023.11:g.13034793T>C, NC_000023.10:g.13052912T>C, NG_021290.1:g.15006A>G

Select item 14908167264.

rs1490816726 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:13039165 (GRCh38)
X:13057284 (GRCh37)
Canonical SPDI:: NC_000023.11:13039164:T:C
Gene:: FAM9C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.13039165T>C, NC_000023.10:g.13057284T>C, NG_021290.1:g.10634A>G

Select item 14906513465.

rs1490651346 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: X:13041178 (GRCh38)
X:13059297 (GRCh37)
Canonical SPDI:: NC_000023.11:13041177:T:A
Gene:: FAM9C (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000023.11:g.13041178T>A, NC_000023.10:g.13059297T>A, NG_021290.1:g.8621A>T

Select item 14905128306.

rs1490512830 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:13042642 (GRCh38)
X:13060761 (GRCh37)
Canonical SPDI:: NC_000023.11:13042641:C:T
Gene:: FAM9C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.13042642C>T, NC_000023.10:g.13060761C>T, NG_021290.1:g.7157G>A

Select item 14903593707.

rs1490359370 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: X:13041219 (GRCh38)
X:13059338 (GRCh37)
Canonical SPDI:: NC_000023.11:13041218:G:C
Gene:: FAM9C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.13041219G>C, NC_000023.10:g.13059338G>C, NG_021290.1:g.8580C>G

Select item 14899577298.

rs1489957729 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: X:13049313 (GRCh38)
X:13067432 (GRCh37)
Canonical SPDI:: NC_000023.11:13049312:A:C
Gene:: LOC105373133 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.13049313A>C, NC_000023.10:g.13067432A>C, NG_021290.1:g.486T>G

Select item 14897286699.

rs1489728669 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: X:13049066 (GRCh38)
X:13067185 (GRCh37)
Canonical SPDI:: NC_000023.11:13049065:T:A,NC_000023.11:13049065:T:C
Gene:: LOC105373133 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.00004/1 (TOMMO)
HGVS:: NC_000023.11:g.13049066T>A, NC_000023.11:g.13049066T>C, NC_000023.10:g.13067185T>A, NC_000023.10:g.13067185T>C, NG_021290.1:g.733A>T, NG_021290.1:g.733A>G

Select item 148921807810.

rs1489218078 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:13045813 (GRCh38)
X:13063932 (GRCh37)
Canonical SPDI:: NC_000023.11:13045812:G:A
Gene:: FAM9C (Varview), LOC105373133 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.13045813G>A, NC_000023.10:g.13063932G>A, NG_021290.1:g.3986C>T

Select item 148903253811.

rs1489032538 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:13044671 (GRCh38)
X:13062790 (GRCh37)
Canonical SPDI:: NC_000023.11:13044670:G:A
Gene:: FAM9C (Varview), LOC105373133 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.13044671G>A, NC_000023.10:g.13062790G>A, NG_021290.1:g.5128C>T, NM_174901.5:c.-200C>T

Select item 148870448412.

rs1488704484 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:13044916 (GRCh38)
X:13063035 (GRCh37)
Canonical SPDI:: NC_000023.11:13044915:C:T
Gene:: FAM9C (Varview), LOC105373133 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.13044916C>T, NC_000023.10:g.13063035C>T, NG_021290.1:g.4883G>A

Select item 148865449213.

rs1488654492 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: X:13044043 (GRCh38)
X:13062162 (GRCh37)
Canonical SPDI:: NC_000023.11:13044042:C:T
Gene:: FAM9C (Varview), LOC105373133 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.13044043C>T, NC_000023.10:g.13062162C>T, NG_021290.1:g.5756G>A

Select item 148863648214.

rs1488636482 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:13039378 (GRCh38)
X:13057497 (GRCh37)
Canonical SPDI:: NC_000023.11:13039377:G:A
Gene:: FAM9C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000023.11:g.13039378G>A, NC_000023.10:g.13057497G>A, NG_021290.1:g.10421C>T

Select item 148856512815.

rs1488565128 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:13035460 (GRCh38)
X:13053579 (GRCh37)
Canonical SPDI:: NC_000023.11:13035459:A:G
Gene:: FAM9C (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000142/2 (ALFA)
G=0.00001/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.13035460A>G, NC_000023.10:g.13053579A>G, NG_021290.1:g.14339T>C

Select item 148856449816.

rs1488564498 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:13037733 (GRCh38)
X:13055852 (GRCh37)
Canonical SPDI:: NC_000023.11:13037732:G:A
Gene:: FAM9C (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000019/2 (GnomAD)
A=0.000019/5 (TOPMED)
HGVS:: NC_000023.11:g.13037733G>A, NC_000023.10:g.13055852G>A, NG_021290.1:g.12066C>T, XM_005274460.4:c.*374C>T, XM_005274460.3:c.*374C>T, XM_005274460.2:c.*374C>T, XM_005274460.1:c.*374C>T, XM_024452348.2:c.*708C>T, XM_024452348.1:c.*708C>T

Select item 148823654317.

rs1488236543 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:13037460 (GRCh38)
X:13055579 (GRCh37)
Canonical SPDI:: NC_000023.11:13037459:T:C
Gene:: FAM9C (Varview)
Functional Consequence:: intron_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000132/2 (ALFA)
C=0.000008/2 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.13037460T>C, NC_000023.10:g.13055579T>C, NG_021290.1:g.12339A>G, XM_005274460.4:c.*647A>G, XM_005274460.3:c.*647A>G, XM_005274460.2:c.*647A>G, XM_005274460.1:c.*647A>G, XM_024452348.2:c.*981A>G, XM_024452348.1:c.*981A>G

Select item 148816993318.

rs1488169933 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: X:13034344 (GRCh38)
X:13052463 (GRCh37)
Canonical SPDI:: NC_000023.11:13034343:T:C
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000008/2 (TOPMED)
C=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.13034344T>C, NC_000023.10:g.13052463T>C, NG_021290.1:g.15455A>G

Select item 148781637019.

rs1487816370 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:13047587 (GRCh38)
X:13065706 (GRCh37)
Canonical SPDI:: NC_000023.11:13047586:A:G
Gene:: LOC105373133 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000142/2 (ALFA)
G=0.000019/2 (GnomAD)
G=0.000023/6 (TOPMED)
HGVS:: NC_000023.11:g.13047587A>G, NC_000023.10:g.13065706A>G, NG_021290.1:g.2212T>C

Select item 148765003220.

rs1487650032 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:13042623 (GRCh38)
X:13060742 (GRCh37)
Canonical SPDI:: NC_000023.11:13042622:G:A
Gene:: FAM9C (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.13042623G>A, NC_000023.10:g.13060742G>A, NG_021290.1:g.7176C>T

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