SNP Links for Nucleotide (Select 299829234) - SNP

Links from Nucleotide

Items: 1 to 20 of 814

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Select item 14908160781.

rs1490816078 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 5:3421241 (GRCh38)
5:3421355 (GRCh37)
Canonical SPDI:: NC_000005.10:3421240:C:A
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.3421241C>A, NC_000005.9:g.3421355C>A, NR_033898.1:n.864G>T

Select item 14881115802.

rs1488111580 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 5:3417404 (GRCh38)
5:3417518 (GRCh37)
Canonical SPDI:: NC_000005.10:3417403:G:A,NC_000005.10:3417403:G:C
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000022/3 (GnomAD)
HGVS:: NC_000005.10:g.3417404G>A, NC_000005.10:g.3417404G>C, NC_000005.9:g.3417518G>A, NC_000005.9:g.3417518G>C, NR_033898.1:n.2947C>T, NR_033898.1:n.2947C>G

Select item 14868044573.

rs1486804457 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 5:3417423 (GRCh38)
5:3417537 (GRCh37)
Canonical SPDI:: NC_000005.10:3417422:T:C
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.3417423T>C, NC_000005.9:g.3417537T>C, NR_033898.1:n.2928A>G

Select item 14858826684.

rs1485882668 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 5:3417624 (GRCh38)
5:3417738 (GRCh37)
Canonical SPDI:: NC_000005.10:3417623:T:C
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000036/5 (GnomAD)
C=0.000038/10 (TOPMED)
HGVS:: NC_000005.10:g.3417624T>C, NC_000005.9:g.3417738T>C, NR_033898.1:n.2727A>G

Select item 14858549205.

rs1485854920 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: 5:3418594 (GRCh38)
5:3418708 (GRCh37)
Canonical SPDI:: NC_000005.10:3418593:TTTT:TTT
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.3418597del, NC_000005.9:g.3418711del, NR_033898.1:n.1757del

Select item 14849048736.

rs1484904873 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:3417239 (GRCh38)
5:3417353 (GRCh37)
Canonical SPDI:: NC_000005.10:3417238:G:A
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000012/1 (GnomAD)
HGVS:: NC_000005.10:g.3417239G>A, NC_000005.9:g.3417353G>A, NR_033898.1:n.3112C>T

Select item 14835642037.

rs1483564203 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 5:3417615 (GRCh38)
5:3417729 (GRCh37)
Canonical SPDI:: NC_000005.10:3417614:G:A,NC_000005.10:3417614:G:T
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.3417615G>A, NC_000005.10:g.3417615G>T, NC_000005.9:g.3417729G>A, NC_000005.9:g.3417729G>T, NR_033898.1:n.2736C>T, NR_033898.1:n.2736C>A

Select item 14831523498.

rs1483152349 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:3535966 (GRCh38)
5:3536080 (GRCh37)
Canonical SPDI:: NC_000005.10:3535965:G:A
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000005.10:g.3535966G>A, NC_000005.9:g.3536080G>A, NR_033898.1:n.129C>T

Select item 14829393519.

rs1482939351 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 5:3531843 (GRCh38)
5:3531957 (GRCh37)
Canonical SPDI:: NC_000005.10:3531842:A:
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000038/10 (TOPMED)
-=0.000043/6 (GnomAD)
HGVS:: NC_000005.10:g.3531843del, NC_000005.9:g.3531957del, NR_033898.1:n.369del

Select item 148170080810.

rs1481700808 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:3419003 (GRCh38)
5:3419117 (GRCh37)
Canonical SPDI:: NC_000005.10:3419002:G:A
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000029/4 (GnomAD)
A=0.000057/15 (TOPMED)
HGVS:: NC_000005.10:g.3419003G>A, NC_000005.9:g.3419117G>A, NR_033898.1:n.1348C>T

Select item 147765900411.

rs1477659004 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:3535923 (GRCh38)
5:3536037 (GRCh37)
Canonical SPDI:: NC_000005.10:3535922:C:T
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.3535923C>T, NC_000005.9:g.3536037C>T, NR_033898.1:n.172G>A

Select item 147762154712.

rs1477621547 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:3418832 (GRCh38)
5:3418946 (GRCh37)
Canonical SPDI:: NC_000005.10:3418831:C:T
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.3418832C>T, NC_000005.9:g.3418946C>T, NR_033898.1:n.1519G>A

Select item 147683261013.

rs1476832610 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 5:3419043 (GRCh38)
5:3419157 (GRCh37)
Canonical SPDI:: NC_000005.10:3419042:C:G
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.3419043C>G, NC_000005.9:g.3419157C>G, NR_033898.1:n.1308G>C

Select item 147673336714.

rs1476733367 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 5:3417262 (GRCh38)
5:3417376 (GRCh37)
Canonical SPDI:: NC_000005.10:3417261:C:A,NC_000005.10:3417261:C:T
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000066/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000223/1 (Estonian)
HGVS:: NC_000005.10:g.3417262C>A, NC_000005.10:g.3417262C>T, NC_000005.9:g.3417376C>A, NC_000005.9:g.3417376C>T, NR_033898.1:n.3089G>T, NR_033898.1:n.3089G>A

Select item 147669101415.

rs1476691014 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 5:3531827 (GRCh38)
5:3531941 (GRCh37)
Canonical SPDI:: NC_000005.10:3531826:G:T
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000005.10:g.3531827G>T, NC_000005.9:g.3531941G>T, NR_033898.1:n.385C>A

Select item 147638964216.

rs1476389642 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 5:3531806 (GRCh38)
5:3531920 (GRCh37)
Canonical SPDI:: NC_000005.10:3531805:G:A,NC_000005.10:3531805:G:T
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000029/4 (GnomAD)
HGVS:: NC_000005.10:g.3531806G>A, NC_000005.10:g.3531806G>T, NC_000005.9:g.3531920G>A, NC_000005.9:g.3531920G>T, NR_033898.1:n.406C>T, NR_033898.1:n.406C>A

Select item 147597519317.

rs1475975193 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:3419120 (GRCh38)
5:3419234 (GRCh37)
Canonical SPDI:: NC_000005.10:3419119:G:A
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000005.10:g.3419120G>A, NC_000005.9:g.3419234G>A, NR_033898.1:n.1231C>T

Select item 147585086418.

rs1475850864 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 5:3535817 (GRCh38)
5:3535931 (GRCh37)
Canonical SPDI:: NC_000005.10:3535816:GG:G
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
HGVS:: NC_000005.10:g.3535818del, NC_000005.9:g.3535932del, NR_033898.1:n.278del

Select item 147556127019.

rs1475561270 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 5:3419039 (GRCh38)
5:3419153 (GRCh37)
Canonical SPDI:: NC_000005.10:3419038:G:A,NC_000005.10:3419038:G:T
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000005.10:g.3419039G>A, NC_000005.10:g.3419039G>T, NC_000005.9:g.3419153G>A, NC_000005.9:g.3419153G>T, NR_033898.1:n.1312C>T, NR_033898.1:n.1312C>A

Select item 147542726620.

rs1475427266 [Homo sapiens]

Variant type:: DEL
Alleles:: TT>- [Show Flanks]
Chromosome:: 5:3417967 (GRCh38)
5:3418081 (GRCh37)
Canonical SPDI:: NC_000005.10:3417966:TT:
Gene:: LINC01019 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000005.10:g.3417967_3417968del, NC_000005.9:g.3418081_3418082del, NR_033898.1:n.2383_2384del

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