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Links from Nucleotide

Items: 1 to 20 of 510

1.

rs1491354441 [Homo sapiens]
    Variant type:
    DELINS
    Alleles:
    AG>- [Show Flanks]
    Chromosome:
    1:222558664 (GRCh38)
    1:222732006 (GRCh37)
    Canonical SPDI:
    NC_000001.11:222558661:AGAG:AG
    Gene:
    TAF1A (Varview)
    Functional Consequence:
    frameshift_variant,non_coding_transcript_variant,terminator_codon_variant,genic_downstream_transcript_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    AGAG=0./0 (ALFA)
    -=0.000004/1 (TOPMED)
    -=0.000005/1 (GnomAD_exomes)
    -=0.000009/1 (ExAC)
    HGVS:
    2.

    rs1490795159 [Homo sapiens]
      Variant type:
      DELINS
      Alleles:
      ->T [Show Flanks]
      Chromosome:
      1:222558191 (GRCh38)
      1:222731534 (GRCh37)
      Canonical SPDI:
      NC_000001.11:222558191:TTTTTT:TTTTTTT
      Gene:
      TAF1A (Varview)
      Functional Consequence:
      non_coding_transcript_variant,3_prime_UTR_variant,downstream_transcript_variant,genic_downstream_transcript_variant
      HGVS:
      3.

      rs1490702814 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        A>C [Show Flanks]
        Chromosome:
        1:222588511 (GRCh38)
        1:222761853 (GRCh37)
        Canonical SPDI:
        NC_000001.11:222588510:A:C
        Gene:
        TAF1A (Varview), TAF1A-AS1 (Varview)
        Functional Consequence:
        upstream_transcript_variant,coding_sequence_variant,5_prime_UTR_variant,2KB_upstream_variant,non_coding_transcript_variant,missense_variant,genic_upstream_transcript_variant
        Validated:
        by frequency,by alfa
        MAF:
        C=0./0 (ALFA)
        C=0.000004/1 (GnomAD_exomes)
        C=0.000004/1 (TOPMED)
        HGVS:
        4.

        rs1490244387 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          C>T [Show Flanks]
          Chromosome:
          1:222561470 (GRCh38)
          1:222734812 (GRCh37)
          Canonical SPDI:
          NC_000001.11:222561469:C:T
          Gene:
          TAF1A (Varview)
          Functional Consequence:
          genic_downstream_transcript_variant,non_coding_transcript_variant,stop_gained,coding_sequence_variant
          Validated:
          by frequency,by alfa,by cluster
          MAF:
          T=0./0 (ALFA)
          T=0.000004/1 (TOPMED)
          T=0.000007/1 (GnomAD)
          HGVS:
          5.

          rs1489934549 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            T>G [Show Flanks]
            Chromosome:
            1:222561365 (GRCh38)
            1:222734707 (GRCh37)
            Canonical SPDI:
            NC_000001.11:222561364:T:G
            Gene:
            TAF1A (Varview)
            Functional Consequence:
            genic_downstream_transcript_variant,non_coding_transcript_variant,missense_variant,coding_sequence_variant
            Validated:
            by frequency,by alfa
            MAF:
            G=0.000111/1 (ALFA)
            G=0.000004/1 (GnomAD_exomes)
            HGVS:
            6.

            rs1488691039 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              C>G,T [Show Flanks]
              Chromosome:
              1:222588559 (GRCh38)
              1:222761901 (GRCh37)
              Canonical SPDI:
              NC_000001.11:222588558:C:G,NC_000001.11:222588558:C:T
              Gene:
              TAF1A (Varview), TAF1A-AS1 (Varview)
              Functional Consequence:
              upstream_transcript_variant,coding_sequence_variant,5_prime_UTR_variant,2KB_upstream_variant,non_coding_transcript_variant,missense_variant,genic_upstream_transcript_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              T=0./0 (ALFA)
              T=0.000004/1 (GnomAD_exomes)
              T=0.000004/1 (TOPMED)
              HGVS:
              NC_000001.11:g.222588559C>G, NC_000001.11:g.222588559C>T, NC_000001.10:g.222761901C>G, NC_000001.10:g.222761901C>T, XM_005273343.5:c.5G>C, XM_005273343.5:c.5G>A, XM_005273343.4:c.5G>C, XM_005273343.4:c.5G>A, XM_005273343.3:c.5G>C, XM_005273343.3:c.5G>A, XM_005273343.2:c.5G>C, XM_005273343.2:c.5G>A, XM_005273343.1:c.5G>C, XM_005273343.1:c.5G>A, NM_005681.4:c.5G>C, NM_005681.4:c.5G>A, NM_005681.3:c.5G>C, NM_005681.3:c.5G>A, XM_006711612.2:c.5G>C, XM_006711612.2:c.5G>A, XM_006711612.1:c.5G>C, XM_006711612.1:c.5G>A, NM_139352.2:c.-168G>C, NM_139352.2:c.-168G>A, XM_047433601.1:c.5G>C, XM_047433601.1:c.5G>A, XR_007064851.1:n.214G>C, XR_007064851.1:n.214G>A, XR_007064852.1:n.214G>C, XR_007064852.1:n.214G>A, NM_001201536.1:c.5G>C, NM_001201536.1:c.5G>A, XM_047433599.1:c.5G>C, XM_047433599.1:c.5G>A, XP_005273400.1:p.Ser2Thr, XP_005273400.1:p.Ser2Asn, NP_005672.1:p.Ser2Thr, NP_005672.1:p.Ser2Asn, XP_006711675.1:p.Ser2Thr, XP_006711675.1:p.Ser2Asn, XP_047289557.1:p.Ser2Thr, XP_047289557.1:p.Ser2Asn, NP_001188465.1:p.Ser2Thr, NP_001188465.1:p.Ser2Asn, XP_047289555.1:p.Ser2Thr, XP_047289555.1:p.Ser2Asn
              7.

              rs1486785823 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                G>A [Show Flanks]
                Chromosome:
                1:222558112 (GRCh38)
                1:222731454 (GRCh37)
                Canonical SPDI:
                NC_000001.11:222558111:G:A
                Gene:
                TAF1A (Varview)
                Functional Consequence:
                3_prime_UTR_variant,intron_variant,downstream_transcript_variant,genic_downstream_transcript_variant
                Validated:
                by frequency,by alfa
                MAF:
                A=0./0 (ALFA)
                HGVS:
                8.

                rs1486470132 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  C>T [Show Flanks]
                  Chromosome:
                  1:222558700 (GRCh38)
                  1:222732042 (GRCh37)
                  Canonical SPDI:
                  NC_000001.11:222558699:C:T
                  Gene:
                  TAF1A (Varview)
                  Functional Consequence:
                  genic_downstream_transcript_variant,non_coding_transcript_variant,missense_variant,coding_sequence_variant
                  Validated:
                  by frequency,by cluster
                  MAF:
                  T=0.000004/1 (GnomAD_exomes)
                  HGVS:
                  9.

                  rs1484749473 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    G>T [Show Flanks]
                    Chromosome:
                    1:222589908 (GRCh38)
                    1:222763250 (GRCh37)
                    Canonical SPDI:
                    NC_000001.11:222589907:G:T
                    Gene:
                    TAF1A (Varview), TAF1A-AS1 (Varview)
                    Functional Consequence:
                    upstream_transcript_variant,5_prime_UTR_variant,2KB_upstream_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
                    Validated:
                    by frequency,by alfa
                    MAF:
                    T=0./0 (ALFA)
                    T=0.000008/2 (TOPMED)
                    HGVS:
                    11.

                    rs1482383697 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      G>A [Show Flanks]
                      Chromosome:
                      1:222558181 (GRCh38)
                      1:222731523 (GRCh37)
                      Canonical SPDI:
                      NC_000001.11:222558180:G:A
                      Gene:
                      TAF1A (Varview)
                      Functional Consequence:
                      non_coding_transcript_variant,downstream_transcript_variant,3_prime_UTR_variant,genic_downstream_transcript_variant
                      Validated:
                      by frequency,by alfa
                      MAF:
                      A=0./0 (ALFA)
                      A=0.000008/2 (TOPMED)
                      HGVS:
                      13.

                      rs1479138501 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        T>C [Show Flanks]
                        Chromosome:
                        1:222564115 (GRCh38)
                        1:222737457 (GRCh37)
                        Canonical SPDI:
                        NC_000001.11:222564114:T:C
                        Gene:
                        TAF1A (Varview)
                        Functional Consequence:
                        missense_variant,synonymous_variant,non_coding_transcript_variant,coding_sequence_variant,genic_downstream_transcript_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        C=0./0 (ALFA)
                        C=0.000007/1 (GnomAD)
                        HGVS:
                        15.

                        rs1478108578 [Homo sapiens]
                          Variant type:
                          SNV
                          Alleles:
                          A>G [Show Flanks]
                          Chromosome:
                          1:222588496 (GRCh38)
                          1:222761838 (GRCh37)
                          Canonical SPDI:
                          NC_000001.11:222588495:A:G
                          Gene:
                          TAF1A (Varview), TAF1A-AS1 (Varview)
                          Functional Consequence:
                          2KB_upstream_variant,missense_variant,upstream_transcript_variant,genic_upstream_transcript_variant,non_coding_transcript_variant,coding_sequence_variant,5_prime_UTR_variant
                          Validated:
                          by frequency,by alfa,by cluster
                          MAF:
                          G=0./0 (ALFA)
                          G=0.000004/1 (GnomAD_exomes)
                          G=0.000004/1 (TOPMED)
                          HGVS:
                          16.

                          rs1475571743 [Homo sapiens]
                            Variant type:
                            SNV
                            Alleles:
                            G>A [Show Flanks]
                            Chromosome:
                            1:222557910 (GRCh38)
                            1:222731252 (GRCh37)
                            Canonical SPDI:
                            NC_000001.11:222557909:G:A
                            Gene:
                            TAF1A (Varview)
                            Functional Consequence:
                            genic_downstream_transcript_variant,3_prime_UTR_variant,downstream_transcript_variant,intron_variant
                            Validated:
                            by frequency,by alfa
                            MAF:
                            A=0./0 (ALFA)
                            A=0.000007/1 (GnomAD)
                            HGVS:
                            17.

                            rs1472210846 [Homo sapiens]
                              Variant type:
                              SNV
                              Alleles:
                              G>A,C [Show Flanks]
                              Chromosome:
                              1:222558095 (GRCh38)
                              1:222731437 (GRCh37)
                              Canonical SPDI:
                              NC_000001.11:222558094:G:A,NC_000001.11:222558094:G:C
                              Gene:
                              TAF1A (Varview)
                              Functional Consequence:
                              genic_downstream_transcript_variant,3_prime_UTR_variant,downstream_transcript_variant,intron_variant
                              Validated:
                              by frequency,by alfa,by cluster
                              MAF:
                              C=0./0 (ALFA)
                              A=0.000029/4 (GnomAD)
                              HGVS:
                              18.

                              rs1471793724 [Homo sapiens]
                                Variant type:
                                SNV
                                Alleles:
                                A>T [Show Flanks]
                                Chromosome:
                                1:222558753 (GRCh38)
                                1:222732095 (GRCh37)
                                Canonical SPDI:
                                NC_000001.11:222558752:A:T
                                Gene:
                                TAF1A (Varview)
                                Functional Consequence:
                                genic_downstream_transcript_variant,coding_sequence_variant,non_coding_transcript_variant,stop_gained
                                Validated:
                                by frequency,by alfa
                                MAF:
                                T=0./0 (ALFA)
                                T=0.000004/1 (TOPMED)
                                HGVS:

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