SNP Links for Nucleotide (Select 325197152) - SNP

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Select item 14915601741.

rs1491560174 has merged into rs142936750 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACACACACACACACACACACACAC>-,AC,ACAC,ACACAC,ACACACAC,ACACACACAC,ACACACACACAC,ACACACACACACAC,ACACACACACACACAC,ACACACACACACACACAC,ACACACACACACACACACAC,ACACACACACACACACACACAC,ACACACACACACACACACACACACAC,ACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACACAC [Show Flanks]
Chromosome:: 9:114792243 (GRCh38)
9:117554523 (GRCh37)
Canonical SPDI:: NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000009.12:114792224:ACACACACACACACACACACACACACACACACACACACACAC:ACACACACACACACACACACACACACACACACACACACACACACACACACACAC
Gene:: TNFSF15 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACACACACACACACACAC=0./0 (ALFA)
-=0.4722/1820 (ALSPAC)
ACACACACAC=0.5/20 (GENOME_DK)
HGVS:: NC_000009.12:g.114792225AC[9], NC_000009.12:g.114792225AC[10], NC_000009.12:g.114792225AC[11], NC_000009.12:g.114792225AC[12], NC_000009.12:g.114792225AC[13], NC_000009.12:g.114792225AC[14], NC_000009.12:g.114792225AC[15], NC_000009.12:g.114792225AC[16], NC_000009.12:g.114792225AC[17], NC_000009.12:g.114792225AC[18], NC_000009.12:g.114792225AC[19], NC_000009.12:g.114792225AC[20], NC_000009.12:g.114792225AC[22], NC_000009.12:g.114792225AC[23], NC_000009.12:g.114792225AC[24], NC_000009.12:g.114792225AC[25], NC_000009.12:g.114792225AC[26], NC_000009.12:g.114792225AC[27], NC_000009.11:g.117554505AC[9], NC_000009.11:g.117554505AC[10], NC_000009.11:g.117554505AC[11], NC_000009.11:g.117554505AC[12], NC_000009.11:g.117554505AC[13], NC_000009.11:g.117554505AC[14], NC_000009.11:g.117554505AC[15], NC_000009.11:g.117554505AC[16], NC_000009.11:g.117554505AC[17], NC_000009.11:g.117554505AC[18], NC_000009.11:g.117554505AC[19], NC_000009.11:g.117554505AC[20], NC_000009.11:g.117554505AC[22], NC_000009.11:g.117554505AC[23], NC_000009.11:g.117554505AC[24], NC_000009.11:g.117554505AC[25], NC_000009.11:g.117554505AC[26], NC_000009.11:g.117554505AC[27], NG_011488.2:g.18863GT[9], NG_011488.2:g.18863GT[10], NG_011488.2:g.18863GT[11], NG_011488.2:g.18863GT[12], NG_011488.2:g.18863GT[13], NG_011488.2:g.18863GT[14], NG_011488.2:g.18863GT[15], NG_011488.2:g.18863GT[16], NG_011488.2:g.18863GT[17], NG_011488.2:g.18863GT[18], NG_011488.2:g.18863GT[19], NG_011488.2:g.18863GT[20], NG_011488.2:g.18863GT[22], NG_011488.2:g.18863GT[23], NG_011488.2:g.18863GT[24], NG_011488.2:g.18863GT[25], NG_011488.2:g.18863GT[26], NG_011488.2:g.18863GT[27]

Select item 14915288052.

rs1491528805 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 9:114786912 (GRCh38)
9:117549193 (GRCh37)
Canonical SPDI:: NC_000009.12:114786912::G
Gene:: TNFSF15 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0.00008/1 (ALFA)
HGVS:: NC_000009.12:g.114786912_114786913insG, NC_000009.11:g.117549192_117549193insG, NG_011488.2:g.24216_24217insC, NM_005118.4:c.*3539_*3540insC, NM_005118.3:c.*3539_*3540insC, NM_001204344.1:c.*3539_*3540insC

Select item 14913262973.

rs1491326297 has merged into rs1220275133 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 9:114786933 (GRCh38)
9:117549213 (GRCh37)
Canonical SPDI:: NC_000009.12:114786932:G:
Gene:: TNFSF15 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000326/45 (GnomAD)
-=0.000779/13 (TOMMO)
HGVS:: NC_000009.12:g.114786933del, NC_000009.11:g.117549213del, NG_011488.2:g.24196del, NM_005118.4:c.*3519del, NM_005118.3:c.*3519del, NM_001204344.1:c.*3519del

Select item 14912787184.

rs1491278718 has merged into rs11429963 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAA>-,A,AA,AAAAA,AAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 9:114786921 (GRCh38)
9:117549201 (GRCh37)
Canonical SPDI:: NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000009.12:114786911:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: TNFSF15 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAA=0./0 (ALFA)
-=0.000015/4 (TOPMED)
HGVS:: NC_000009.12:g.114786921_114786932del, NC_000009.12:g.114786922_114786932del, NC_000009.12:g.114786923_114786932del, NC_000009.12:g.114786926_114786932del, NC_000009.12:g.114786927_114786932del, NC_000009.12:g.114786929_114786932del, NC_000009.12:g.114786930_114786932del, NC_000009.12:g.114786931_114786932del, NC_000009.12:g.114786932del, NC_000009.12:g.114786932dup, NC_000009.12:g.114786931_114786932dup, NC_000009.12:g.114786930_114786932dup, NC_000009.12:g.114786929_114786932dup, NC_000009.12:g.114786928_114786932dup, NC_000009.12:g.114786927_114786932dup, NC_000009.12:g.114786926_114786932dup, NC_000009.12:g.114786925_114786932dup, NC_000009.12:g.114786924_114786932dup, NC_000009.12:g.114786921_114786932dup, NC_000009.12:g.114786920_114786932dup, NC_000009.11:g.117549201_117549212del, NC_000009.11:g.117549202_117549212del, NC_000009.11:g.117549203_117549212del, NC_000009.11:g.117549206_117549212del, NC_000009.11:g.117549207_117549212del, NC_000009.11:g.117549209_117549212del, NC_000009.11:g.117549210_117549212del, NC_000009.11:g.117549211_117549212del, NC_000009.11:g.117549212del, NC_000009.11:g.117549212dup, NC_000009.11:g.117549211_117549212dup, NC_000009.11:g.117549210_117549212dup, NC_000009.11:g.117549209_117549212dup, NC_000009.11:g.117549208_117549212dup, NC_000009.11:g.117549207_117549212dup, NC_000009.11:g.117549206_117549212dup, NC_000009.11:g.117549205_117549212dup, NC_000009.11:g.117549204_117549212dup, NC_000009.11:g.117549201_117549212dup, NC_000009.11:g.117549200_117549212dup, NG_011488.2:g.24206_24217del, NG_011488.2:g.24207_24217del, NG_011488.2:g.24208_24217del, NG_011488.2:g.24211_24217del, NG_011488.2:g.24212_24217del, NG_011488.2:g.24214_24217del, NG_011488.2:g.24215_24217del, NG_011488.2:g.24216_24217del, NG_011488.2:g.24217del, NG_011488.2:g.24217dup, NG_011488.2:g.24216_24217dup, NG_011488.2:g.24215_24217dup, NG_011488.2:g.24214_24217dup, NG_011488.2:g.24213_24217dup, NG_011488.2:g.24212_24217dup, NG_011488.2:g.24211_24217dup, NG_011488.2:g.24210_24217dup, NG_011488.2:g.24209_24217dup, NG_011488.2:g.24206_24217dup, NG_011488.2:g.24205_24217dup, NM_005118.4:c.*3529_*3540del, NM_005118.4:c.*3530_*3540del, NM_005118.4:c.*3531_*3540del, NM_005118.4:c.*3534_*3540del, NM_005118.4:c.*3535_*3540del, NM_005118.4:c.*3537_*3540del, NM_005118.4:c.*3538_*3540del, NM_005118.4:c.*3539_*3540del, NM_005118.4:c.*3540del, NM_005118.4:c.*3540dup, NM_005118.4:c.*3539_*3540dup, NM_005118.4:c.*3538_*3540dup, NM_005118.4:c.*3537_*3540dup, NM_005118.4:c.*3536_*3540dup, NM_005118.4:c.*3535_*3540dup, NM_005118.4:c.*3534_*3540dup, NM_005118.4:c.*3533_*3540dup, NM_005118.4:c.*3532_*3540dup, NM_005118.4:c.*3529_*3540dup, NM_005118.4:c.*3528_*3540dup, NM_005118.3:c.*3529_*3540del, NM_005118.3:c.*3530_*3540del, NM_005118.3:c.*3531_*3540del, NM_005118.3:c.*3534_*3540del, NM_005118.3:c.*3535_*3540del, NM_005118.3:c.*3537_*3540del, NM_005118.3:c.*3538_*3540del, NM_005118.3:c.*3539_*3540del, NM_005118.3:c.*3540del, NM_005118.3:c.*3540dup, NM_005118.3:c.*3539_*3540dup, NM_005118.3:c.*3538_*3540dup, NM_005118.3:c.*3537_*3540dup, NM_005118.3:c.*3536_*3540dup, NM_005118.3:c.*3535_*3540dup, NM_005118.3:c.*3534_*3540dup, NM_005118.3:c.*3533_*3540dup, NM_005118.3:c.*3532_*3540dup, NM_005118.3:c.*3529_*3540dup, NM_005118.3:c.*3528_*3540dup, NM_001204344.1:c.*3529_*3540del, NM_001204344.1:c.*3530_*3540del, NM_001204344.1:c.*3531_*3540del, NM_001204344.1:c.*3534_*3540del, NM_001204344.1:c.*3535_*3540del, NM_001204344.1:c.*3537_*3540del, NM_001204344.1:c.*3538_*3540del, NM_001204344.1:c.*3539_*3540del, NM_001204344.1:c.*3540del, NM_001204344.1:c.*3540dup, NM_001204344.1:c.*3539_*3540dup, NM_001204344.1:c.*3538_*3540dup, NM_001204344.1:c.*3537_*3540dup, NM_001204344.1:c.*3536_*3540dup, NM_001204344.1:c.*3535_*3540dup, NM_001204344.1:c.*3534_*3540dup, NM_001204344.1:c.*3533_*3540dup, NM_001204344.1:c.*3532_*3540dup, NM_001204344.1:c.*3529_*3540dup, NM_001204344.1:c.*3528_*3540dup

Select item 14909158475.

rs1490915847 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:114800813 (GRCh38)
9:117563093 (GRCh37)
Canonical SPDI:: NC_000009.12:114800812:T:C
Gene:: TNFSF15 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000224/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000223/1 (Estonian)
HGVS:: NC_000009.12:g.114800813T>C, NC_000009.11:g.117563093T>C, NG_011488.2:g.10316A>G

Select item 14908619446.

rs1490861944 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:114799501 (GRCh38)
9:117561781 (GRCh37)
Canonical SPDI:: NC_000009.12:114799500:C:T
Gene:: TNFSF15 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.114799501C>T, NC_000009.11:g.117561781C>T, NG_011488.2:g.11628G>A

Select item 14906779587.

rs1490677958 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 9:114789944 (GRCh38)
9:117552224 (GRCh37)
Canonical SPDI:: NC_000009.12:114789943:A:T
Gene:: TNFSF15 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.114789944A>T, NC_000009.11:g.117552224A>T, NG_011488.2:g.21185T>A, NM_005118.4:c.*508T>A, NM_005118.3:c.*508T>A, NM_001204344.1:c.*508T>A

Select item 14904646088.

rs1490464608 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 9:114806227 (GRCh38)
9:117568508 (GRCh37)
Canonical SPDI:: NC_000009.12:114806227::G
Gene:: TNFSF15 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.114806227_114806228insG, NC_000009.11:g.117568507_117568508insG, NG_011488.2:g.4901_4902insC

Select item 14903321579.

rs1490332157 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>-,TT [Show Flanks]
Chromosome:: 9:114804888 (GRCh38)
9:117567168 (GRCh37)
Canonical SPDI:: NC_000009.12:114804887:TTTTTTT:TTTTTT,NC_000009.12:114804887:TTTTTTT:TTTTTTTT
Gene:: TNFSF15 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTT=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.114804894del, NC_000009.12:g.114804894dup, NC_000009.11:g.117567174del, NC_000009.11:g.117567174dup, NG_011488.2:g.6241del, NG_011488.2:g.6241dup

Select item 149029695710.

rs1490296957 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:114796627 (GRCh38)
9:117558907 (GRCh37)
Canonical SPDI:: NC_000009.12:114796626:T:C
Gene:: TNFSF15 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.114796627T>C, NC_000009.11:g.117558907T>C, NG_011488.2:g.14502A>G

Select item 149010078511.

rs1490100785 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 9:114797979 (GRCh38)
9:117560259 (GRCh37)
Canonical SPDI:: NC_000009.12:114797978:A:T
Gene:: TNFSF15 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.114797979A>T, NC_000009.11:g.117560259A>T, NG_011488.2:g.13150T>A

Select item 149009744812.

rs1490097448 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:114799669 (GRCh38)
9:117561949 (GRCh37)
Canonical SPDI:: NC_000009.12:114799668:T:C
Gene:: TNFSF15 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000029/4 (GnomAD)
C=0.000053/14 (TOPMED)
C=0.000637/11 (TOMMO)
C=0.001711/5 (KOREAN)
HGVS:: NC_000009.12:g.114799669T>C, NC_000009.11:g.117561949T>C, NG_011488.2:g.11460A>G

Select item 148997563213.

rs1489975632 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:114796433 (GRCh38)
9:117558713 (GRCh37)
Canonical SPDI:: NC_000009.12:114796432:T:A
Gene:: TNFSF15 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.114796433T>A, NC_000009.11:g.117558713T>A, NG_011488.2:g.14696A>T

Select item 148995982614.

rs1489959826 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:114796308 (GRCh38)
9:117558588 (GRCh37)
Canonical SPDI:: NC_000009.12:114796307:T:C
Gene:: TNFSF15 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
C=0.000342/1 (KOREAN)
HGVS:: NC_000009.12:g.114796308T>C, NC_000009.11:g.117558588T>C, NG_011488.2:g.14821A>G

Select item 148990515415.

rs1489905154 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 9:114797458 (GRCh38)
9:117559738 (GRCh37)
Canonical SPDI:: NC_000009.12:114797457:T:G
Gene:: TNFSF15 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.114797458T>G, NC_000009.11:g.117559738T>G, NG_011488.2:g.13671A>C

Select item 148971375416.

rs1489713754 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 9:114796262 (GRCh38)
9:117558542 (GRCh37)
Canonical SPDI:: NC_000009.12:114796261:C:G
Gene:: TNFSF15 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000009.12:g.114796262C>G, NC_000009.11:g.117558542C>G, NG_011488.2:g.14867G>C

Select item 148960306717.

rs1489603067 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:114789116 (GRCh38)
9:117551396 (GRCh37)
Canonical SPDI:: NC_000009.12:114789115:A:G
Gene:: TNFSF15 (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.114789116A>G, NC_000009.11:g.117551396A>G, NG_011488.2:g.22013T>C, NM_005118.4:c.*1336T>C, NM_005118.3:c.*1336T>C, NM_001204344.1:c.*1336T>C

Select item 148944853118.

rs1489448531 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:114804043 (GRCh38)
9:117566323 (GRCh37)
Canonical SPDI:: NC_000009.12:114804042:T:A
Gene:: TNFSF15 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.114804043T>A, NC_000009.11:g.117566323T>A, NG_011488.2:g.7086A>T

Select item 148922338819.

rs1489223388 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAGTTT>- [Show Flanks]
Chromosome:: 9:114805496 (GRCh38)
9:117567776 (GRCh37)
Canonical SPDI:: NC_000009.12:114805492:TTTAAGTTT:TTT
Gene:: TNFSF15 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: TTT=0./0 (ALFA)
HGVS:: NC_000009.12:g.114805496_114805501del, NC_000009.11:g.117567776_117567781del, NG_011488.2:g.5631_5636del

Select item 148902053520.

rs1489020535 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:114806241 (GRCh38)
9:117568521 (GRCh37)
Canonical SPDI:: NC_000009.12:114806240:G:A
Gene:: TNFSF15 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00079/12 (ALFA)
A=0.0006/10 (TOMMO)
HGVS:: NC_000009.12:g.114806241G>A, NC_000009.11:g.117568521G>A, NG_011488.2:g.4888C>T

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