SNP Links for Nucleotide (Select 335334955) - SNP

Links from Nucleotide

Items: 1 to 20 of 513

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Select item 14857282161.

rs1485728216 [Homo sapiens]

Variant type:: DEL
Alleles:: AAT>- [Show Flanks]
Chromosome:: 2:6731832 (GRCh38)
2:6871964 (GRCh37)
Canonical SPDI:: NC_000002.12:6731831:AAT:
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.6731832_6731834del, NC_000002.11:g.6871964_6871966del, NR_038369.1:n.862_864del, NM_001001695.1:c.*314_*316del

Select item 14847504082.

rs1484750408 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 2:6731609 (GRCh38)
2:6871741 (GRCh37)
Canonical SPDI:: NC_000002.12:6731608:T:A,NC_000002.12:6731608:T:C
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
A=0.000035/1 (TOMMO)
HGVS:: NC_000002.12:g.6731609T>A, NC_000002.12:g.6731609T>C, NC_000002.11:g.6871741T>A, NC_000002.11:g.6871741T>C, NR_038369.1:n.1087A>T, NR_038369.1:n.1087A>G, NM_001001695.1:c.*539A>T, NM_001001695.1:c.*539A>G

Select item 14843543173.

rs1484354317 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 2:6770287 (GRCh38)
2:6910418 (GRCh37)
Canonical SPDI:: NC_000002.12:6770286:C:G
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
G=0.000156/1 (1000Genomes)
G=0.002229/37 (TOMMO)
HGVS:: NC_000002.12:g.6770287C>G, NC_000002.11:g.6910418C>G, NR_038369.1:n.25G>C, NM_001001695.1:c.-161G>C

Select item 14819381664.

rs1481938166 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:6730661 (GRCh38)
2:6870793 (GRCh37)
Canonical SPDI:: NC_000002.12:6730660:C:T
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.6730661C>T, NC_000002.11:g.6870793C>T, NR_038369.1:n.1624G>A, NM_001001695.1:c.*1076G>A

Select item 14818668235.

rs1481866823 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:6731729 (GRCh38)
2:6871861 (GRCh37)
Canonical SPDI:: NC_000002.12:6731728:T:C
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.6731729T>C, NC_000002.11:g.6871861T>C, NR_038369.1:n.967A>G, NM_001001695.1:c.*419A>G

Select item 14799397666.

rs1479939766 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:6732723 (GRCh38)
2:6872854 (GRCh37)
Canonical SPDI:: NC_000002.12:6732722:C:T
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000002.12:g.6732723C>T, NC_000002.11:g.6872854C>T, NR_038369.1:n.408G>A, NM_001001695.1:c.223G>A

Select item 14798856817.

rs1479885681 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:6736687 (GRCh38)
2:6876818 (GRCh37)
Canonical SPDI:: NC_000002.12:6736686:C:T
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000038/10 (TOPMED)
HGVS:: NC_000002.12:g.6736687C>T, NC_000002.11:g.6876818C>T, NR_038369.1:n.262G>A, NM_001001695.1:c.77G>A

Select item 14797839008.

rs1479783900 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 2:6729648 (GRCh38)
2:6869780 (GRCh37)
Canonical SPDI:: NC_000002.12:6729647:G:T
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.6729648G>T, NC_000002.11:g.6869780G>T, NR_038369.1:n.1651C>A, NM_001001695.1:c.*1103C>A

Select item 14796296899.

rs1479629689 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 2:6729207 (GRCh38)
2:6869339 (GRCh37)
Canonical SPDI:: NC_000002.12:6729206:C:G,NC_000002.12:6729206:C:T
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00001/1 (GnomAD)
T=0.00004/0 (TOMMO)
HGVS:: NC_000002.12:g.6729207C>G, NC_000002.12:g.6729207C>T, NC_000002.11:g.6869339C>G, NC_000002.11:g.6869339C>T, NR_038369.1:n.2092G>C, NR_038369.1:n.2092G>A, NM_001001695.1:c.*1545G>C, NM_001001695.1:c.*1545G>A

Select item 147900419310.

rs1479004193 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->TTTTTT
Chromosome:: no mapping
Canonical SPDI:

Select item 147676466611.

rs1476764666 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 2:6731454 (GRCh38)
2:6871586 (GRCh37)
Canonical SPDI:: NC_000002.12:6731453:G:A,NC_000002.12:6731453:G:C
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000002.12:g.6731454G>A, NC_000002.12:g.6731454G>C, NC_000002.11:g.6871586G>A, NC_000002.11:g.6871586G>C, NR_038369.1:n.1242C>T, NR_038369.1:n.1242C>G, NM_001001695.1:c.*694C>T, NM_001001695.1:c.*694C>G

Select item 147442014912.

rs1474420149 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:6729629 (GRCh38)
2:6869761 (GRCh37)
Canonical SPDI:: NC_000002.12:6729628:G:A
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.6729629G>A, NC_000002.11:g.6869761G>A, NR_038369.1:n.1670C>T, NM_001001695.1:c.*1122C>T

Select item 147423639513.

rs1474236395 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 2:6731252 (GRCh38)
2:6871384 (GRCh37)
Canonical SPDI:: NC_000002.12:6731251:T:A
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.6731252T>A, NC_000002.11:g.6871384T>A, NR_038369.1:n.1444A>T, NM_001001695.1:c.*896A>T

Select item 146980357914.

rs1469803579 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:6732088 (GRCh38)
2:6872220 (GRCh37)
Canonical SPDI:: NC_000002.12:6732087:G:A
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.6732088G>A, NC_000002.11:g.6872220G>A, NR_038369.1:n.608C>T, NM_001001695.1:c.*60C>T

Select item 146694542715.

rs1466945427 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:6729610 (GRCh38)
2:6869742 (GRCh37)
Canonical SPDI:: NC_000002.12:6729609:A:G
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.6729610A>G, NC_000002.11:g.6869742A>G, NR_038369.1:n.1689T>C, NM_001001695.1:c.*1141T>C

Select item 146549802816.

rs1465498028 [Homo sapiens]

Variant type:: DELINS
Alleles:: CACCCCTGCAGG>- [Show Flanks]
Chromosome:: 2:6770161 (GRCh38)
2:6910292 (GRCh37)
Canonical SPDI:: NC_000002.12:6770155:GCAGGCACCCCTGCAGG:GCAGG
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GCAGG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.6770161_6770172del, NC_000002.11:g.6910292_6910303del, NR_038369.1:n.145_156del, NM_001001695.1:c.-41_-30del

Select item 146354449417.

rs1463544494 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:6730737 (GRCh38)
2:6870869 (GRCh37)
Canonical SPDI:: NC_000002.12:6730736:T:C
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.6730737T>C, NC_000002.11:g.6870869T>C, NR_038369.1:n.1548A>G, NM_001001695.1:c.*1000A>G

Select item 146341029618.

rs1463410296 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 2:6731695 (GRCh38)
2:6871827 (GRCh37)
Canonical SPDI:: NC_000002.12:6731694:G:T
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.6731695G>T, NC_000002.11:g.6871827G>T, NR_038369.1:n.1001C>A, NM_001001695.1:c.*453C>A

Select item 146248220819.

rs1462482208 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 2:6732058 (GRCh38)
2:6872190 (GRCh37)
Canonical SPDI:: NC_000002.12:6732057:C:G
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.6732058C>G, NC_000002.11:g.6872190C>G, NR_038369.1:n.638G>C, NM_001001695.1:c.*90G>C

Select item 146065971220.

rs1460659712 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:6732118 (GRCh38)
2:6872250 (GRCh37)
Canonical SPDI:: NC_000002.12:6732117:T:C
Gene:: LINC00487 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000002.12:g.6732118T>C, NC_000002.11:g.6872250T>C, NR_038369.1:n.578A>G, NM_001001695.1:c.*30A>G

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