SNP Links for Nucleotide (Select 343790978) - SNP - NCBI

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Links from Nucleotide

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Select item 14907487101.

rs1490748710 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:16548581 (GRCh38)
12:16701515 (GRCh37)
Canonical SPDI:: NC_000012.12:16548580:C:T
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000012.12:g.16548581C>T, NC_000012.11:g.16701515C>T, NG_029785.2:g.64634G>A, NM_018640.5:c.*2641G>A, NM_018640.4:c.*2641G>A, NM_001001395.2:c.*2641G>A, NM_001243611.1:c.*2641G>A, NR_045012.1:n.3558G>A, NM_001243609.1:c.*2641G>A, NR_045013.1:n.3374G>A, NM_001243613.1:c.*2641G>A, NR_045014.1:n.3307G>A, NM_001243612.1:c.*2641G>A, NM_001243610.1:c.*2641G>A, XM_006719110.5:c.*2641G>A, XM_006719110.4:c.*2641G>A, XM_006719110.3:c.*2641G>A, XM_006719110.2:c.*2641G>A, XM_006719110.1:c.*2641G>A, XM_006719111.3:c.*2641G>A, XM_006719111.2:c.*2641G>A, XM_006719111.1:c.*2641G>A, XM_011520762.2:c.*2641G>A, XM_011520762.1:c.*2641G>A, XM_047429156.1:c.*2641G>A, XM_047429153.1:c.*2641G>A, XM_047429154.1:c.*2641G>A

Select item 14902989422.

rs1490298942 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:16548842 (GRCh38)
12:16701776 (GRCh37)
Canonical SPDI:: NC_000012.12:16548841:C:T
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.16548842C>T, NC_000012.11:g.16701776C>T, NG_029785.2:g.64373G>A, NM_018640.5:c.*2380G>A, NM_018640.4:c.*2380G>A, NM_001001395.2:c.*2380G>A, NM_001243611.1:c.*2380G>A, NR_045012.1:n.3297G>A, NM_001243609.1:c.*2380G>A, NR_045013.1:n.3113G>A, NM_001243613.1:c.*2380G>A, NR_045014.1:n.3046G>A, NM_001243612.1:c.*2380G>A, NM_001243610.1:c.*2380G>A, XM_006719110.5:c.*2380G>A, XM_006719110.4:c.*2380G>A, XM_006719110.3:c.*2380G>A, XM_006719110.2:c.*2380G>A, XM_006719110.1:c.*2380G>A, XM_006719111.3:c.*2380G>A, XM_006719111.2:c.*2380G>A, XM_006719111.1:c.*2380G>A, XM_011520762.2:c.*2380G>A, XM_011520762.1:c.*2380G>A, XM_047429156.1:c.*2380G>A, XM_047429153.1:c.*2380G>A, XM_047429154.1:c.*2380G>A

Select item 14896006443.

rs1489600644 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 12:16548624 (GRCh38)
12:16701558 (GRCh37)
Canonical SPDI:: NC_000012.12:16548623:G:C
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.16548624G>C, NC_000012.11:g.16701558G>C, NG_029785.2:g.64591C>G, NM_018640.5:c.*2598C>G, NM_018640.4:c.*2598C>G, NM_001001395.2:c.*2598C>G, NM_001243611.1:c.*2598C>G, NR_045012.1:n.3515C>G, NM_001243609.1:c.*2598C>G, NR_045013.1:n.3331C>G, NM_001243613.1:c.*2598C>G, NR_045014.1:n.3264C>G, NM_001243612.1:c.*2598C>G, NM_001243610.1:c.*2598C>G, XM_006719110.5:c.*2598C>G, XM_006719110.4:c.*2598C>G, XM_006719110.3:c.*2598C>G, XM_006719110.2:c.*2598C>G, XM_006719110.1:c.*2598C>G, XM_006719111.3:c.*2598C>G, XM_006719111.2:c.*2598C>G, XM_006719111.1:c.*2598C>G, XM_011520762.2:c.*2598C>G, XM_011520762.1:c.*2598C>G, XM_047429156.1:c.*2598C>G, XM_047429153.1:c.*2598C>G, XM_047429154.1:c.*2598C>G

Select item 14874499504.

rs1487449950 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:16549825 (GRCh38)
12:16702759 (GRCh37)
Canonical SPDI:: NC_000012.12:16549824:A:G
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000012.12:g.16549825A>G, NC_000012.11:g.16702759A>G, NG_029785.2:g.63390T>C, NM_018640.5:c.*1397T>C, NM_018640.4:c.*1397T>C, NM_001001395.2:c.*1397T>C, NM_001243611.1:c.*1397T>C, NR_045012.1:n.2314T>C, NM_001243609.1:c.*1397T>C, NR_045013.1:n.2130T>C, NM_001243613.1:c.*1397T>C, NR_045014.1:n.2063T>C, NM_001243612.1:c.*1397T>C, NM_001243610.1:c.*1397T>C, XM_006719110.5:c.*1397T>C, XM_006719110.4:c.*1397T>C, XM_006719110.3:c.*1397T>C, XM_006719110.2:c.*1397T>C, XM_006719110.1:c.*1397T>C, XM_006719111.3:c.*1397T>C, XM_006719111.2:c.*1397T>C, XM_006719111.1:c.*1397T>C, XM_011520762.2:c.*1397T>C, XM_011520762.1:c.*1397T>C, XM_047429156.1:c.*1397T>C, XM_047429153.1:c.*1397T>C, XM_047429154.1:c.*1397T>C

Select item 14862017535.

rs1486201753 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 12:16600868 (GRCh38)
12:16753802 (GRCh37)
Canonical SPDI:: NC_000012.12:16600867:CC:C
Gene:: LMO3 (Varview)
Functional Consequence:: splice_acceptor_variant,5_prime_UTR_variant,upstream_transcript_variant,non_coding_transcript_variant,coding_sequence_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.16600869del, NC_000012.11:g.16753803del, NG_029785.2:g.12347del

Select item 14859730636.

rs1485973063 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: 12:16550558 (GRCh38)
12:16703492 (GRCh37)
Canonical SPDI:: NC_000012.12:16550557:TTTTTTT:TTTTTT
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: TTTTTT=0./0 (ALFA)
HGVS:: NC_000012.12:g.16550564del, NC_000012.11:g.16703498del, NG_029785.2:g.62657del, NM_018640.5:c.*664del, NM_018640.4:c.*664del, NM_001001395.2:c.*664del, NM_001243611.1:c.*664del, NR_045012.1:n.1581del, NM_001243609.1:c.*664del, NR_045013.1:n.1397del, NM_001243613.1:c.*664del, NR_045014.1:n.1330del, NM_001243612.1:c.*664del, NM_001243610.1:c.*664del, XM_006719110.5:c.*664del, XM_006719110.4:c.*664del, XM_006719110.3:c.*664del, XM_006719110.2:c.*664del, XM_006719110.1:c.*664del, XM_006719111.3:c.*664del, XM_006719111.2:c.*664del, XM_006719111.1:c.*664del, XM_011520762.2:c.*664del, XM_011520762.1:c.*664del, XM_047429156.1:c.*664del, XM_047429153.1:c.*664del, XM_047429154.1:c.*664del

Select item 14844266477.

rs1484426647 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:16550582 (GRCh38)
12:16703516 (GRCh37)
Canonical SPDI:: NC_000012.12:16550581:C:T
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.16550582C>T, NC_000012.11:g.16703516C>T, NG_029785.2:g.62633G>A, NM_018640.5:c.*640G>A, NM_018640.4:c.*640G>A, NM_001001395.2:c.*640G>A, NM_001243611.1:c.*640G>A, NR_045012.1:n.1557G>A, NM_001243609.1:c.*640G>A, NR_045013.1:n.1373G>A, NM_001243613.1:c.*640G>A, NR_045014.1:n.1306G>A, NM_001243612.1:c.*640G>A, NM_001243610.1:c.*640G>A, XM_006719110.5:c.*640G>A, XM_006719110.4:c.*640G>A, XM_006719110.3:c.*640G>A, XM_006719110.2:c.*640G>A, XM_006719110.1:c.*640G>A, XM_006719111.3:c.*640G>A, XM_006719111.2:c.*640G>A, XM_006719111.1:c.*640G>A, XM_011520762.2:c.*640G>A, XM_011520762.1:c.*640G>A, XM_047429156.1:c.*640G>A, XM_047429153.1:c.*640G>A, XM_047429154.1:c.*640G>A

Select item 14840350808.

rs1484035080 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:16550263 (GRCh38)
12:16703197 (GRCh37)
Canonical SPDI:: NC_000012.12:16550262:A:G
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.16550263A>G, NC_000012.11:g.16703197A>G, NG_029785.2:g.62952T>C, NM_018640.5:c.*959T>C, NM_018640.4:c.*959T>C, NM_001001395.2:c.*959T>C, NM_001243611.1:c.*959T>C, NR_045012.1:n.1876T>C, NM_001243609.1:c.*959T>C, NR_045013.1:n.1692T>C, NM_001243613.1:c.*959T>C, NR_045014.1:n.1625T>C, NM_001243612.1:c.*959T>C, NM_001243610.1:c.*959T>C, XM_006719110.5:c.*959T>C, XM_006719110.4:c.*959T>C, XM_006719110.3:c.*959T>C, XM_006719110.2:c.*959T>C, XM_006719110.1:c.*959T>C, XM_006719111.3:c.*959T>C, XM_006719111.2:c.*959T>C, XM_006719111.1:c.*959T>C, XM_011520762.2:c.*959T>C, XM_011520762.1:c.*959T>C, XM_047429156.1:c.*959T>C, XM_047429153.1:c.*959T>C, XM_047429154.1:c.*959T>C

Select item 14838132749.

rs1483813274 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:16549323 (GRCh38)
12:16702257 (GRCh37)
Canonical SPDI:: NC_000012.12:16549322:A:G
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.16549323A>G, NC_000012.11:g.16702257A>G, NG_029785.2:g.63892T>C, NM_018640.5:c.*1899T>C, NM_018640.4:c.*1899T>C, NM_001001395.2:c.*1899T>C, NM_001243611.1:c.*1899T>C, NR_045012.1:n.2816T>C, NM_001243609.1:c.*1899T>C, NR_045013.1:n.2632T>C, NM_001243613.1:c.*1899T>C, NR_045014.1:n.2565T>C, NM_001243612.1:c.*1899T>C, NM_001243610.1:c.*1899T>C, XM_006719110.5:c.*1899T>C, XM_006719110.4:c.*1899T>C, XM_006719110.3:c.*1899T>C, XM_006719110.2:c.*1899T>C, XM_006719110.1:c.*1899T>C, XM_006719111.3:c.*1899T>C, XM_006719111.2:c.*1899T>C, XM_006719111.1:c.*1899T>C, XM_011520762.2:c.*1899T>C, XM_011520762.1:c.*1899T>C, XM_047429156.1:c.*1899T>C, XM_047429153.1:c.*1899T>C, XM_047429154.1:c.*1899T>C

Select item 148340871110.

rs1483408711 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:16549260 (GRCh38)
12:16702194 (GRCh37)
Canonical SPDI:: NC_000012.12:16549259:G:A
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.16549260G>A, NC_000012.11:g.16702194G>A, NG_029785.2:g.63955C>T, NM_018640.5:c.*1962C>T, NM_018640.4:c.*1962C>T, NM_001001395.2:c.*1962C>T, NM_001243611.1:c.*1962C>T, NR_045012.1:n.2879C>T, NM_001243609.1:c.*1962C>T, NR_045013.1:n.2695C>T, NM_001243613.1:c.*1962C>T, NR_045014.1:n.2628C>T, NM_001243612.1:c.*1962C>T, NM_001243610.1:c.*1962C>T, XM_006719110.5:c.*1962C>T, XM_006719110.4:c.*1962C>T, XM_006719110.3:c.*1962C>T, XM_006719110.2:c.*1962C>T, XM_006719110.1:c.*1962C>T, XM_006719111.3:c.*1962C>T, XM_006719111.2:c.*1962C>T, XM_006719111.1:c.*1962C>T, XM_011520762.2:c.*1962C>T, XM_011520762.1:c.*1962C>T, XM_047429156.1:c.*1962C>T, XM_047429153.1:c.*1962C>T, XM_047429154.1:c.*1962C>T

Select item 148226571511.

rs1482265715 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 12:16549730 (GRCh38)
12:16702664 (GRCh37)
Canonical SPDI:: NC_000012.12:16549729:T:G
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000019/5 (TOPMED)
HGVS:: NC_000012.12:g.16549730T>G, NC_000012.11:g.16702664T>G, NG_029785.2:g.63485A>C, NM_018640.5:c.*1492A>C, NM_018640.4:c.*1492A>C, NM_001001395.2:c.*1492A>C, NM_001243611.1:c.*1492A>C, NR_045012.1:n.2409A>C, NM_001243609.1:c.*1492A>C, NR_045013.1:n.2225A>C, NM_001243613.1:c.*1492A>C, NR_045014.1:n.2158A>C, NM_001243612.1:c.*1492A>C, NM_001243610.1:c.*1492A>C, XM_006719110.5:c.*1492A>C, XM_006719110.4:c.*1492A>C, XM_006719110.3:c.*1492A>C, XM_006719110.2:c.*1492A>C, XM_006719110.1:c.*1492A>C, XM_006719111.3:c.*1492A>C, XM_006719111.2:c.*1492A>C, XM_006719111.1:c.*1492A>C, XM_011520762.2:c.*1492A>C, XM_011520762.1:c.*1492A>C, XM_047429156.1:c.*1492A>C, XM_047429153.1:c.*1492A>C, XM_047429154.1:c.*1492A>C

Select item 148171170912.

rs1481711709 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:16550601 (GRCh38)
12:16703535 (GRCh37)
Canonical SPDI:: NC_000012.12:16550600:T:C
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.16550601T>C, NC_000012.11:g.16703535T>C, NG_029785.2:g.62614A>G, NM_018640.5:c.*621A>G, NM_018640.4:c.*621A>G, NM_001001395.2:c.*621A>G, NM_001243611.1:c.*621A>G, NR_045012.1:n.1538A>G, NM_001243609.1:c.*621A>G, NR_045013.1:n.1354A>G, NM_001243613.1:c.*621A>G, NR_045014.1:n.1287A>G, NM_001243612.1:c.*621A>G, NM_001243610.1:c.*621A>G, XM_006719110.5:c.*621A>G, XM_006719110.4:c.*621A>G, XM_006719110.3:c.*621A>G, XM_006719110.2:c.*621A>G, XM_006719110.1:c.*621A>G, XM_006719111.3:c.*621A>G, XM_006719111.2:c.*621A>G, XM_006719111.1:c.*621A>G, XM_011520762.2:c.*621A>G, XM_011520762.1:c.*621A>G, XM_047429156.1:c.*621A>G, XM_047429153.1:c.*621A>G, XM_047429154.1:c.*621A>G

Select item 148158733713.

rs1481587337 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:16550095 (GRCh38)
12:16703029 (GRCh37)
Canonical SPDI:: NC_000012.12:16550094:A:G
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000012.12:g.16550095A>G, NC_000012.11:g.16703029A>G, NG_029785.2:g.63120T>C, NM_018640.5:c.*1127T>C, NM_018640.4:c.*1127T>C, NM_001001395.2:c.*1127T>C, NM_001243611.1:c.*1127T>C, NR_045012.1:n.2044T>C, NM_001243609.1:c.*1127T>C, NR_045013.1:n.1860T>C, NM_001243613.1:c.*1127T>C, NR_045014.1:n.1793T>C, NM_001243612.1:c.*1127T>C, NM_001243610.1:c.*1127T>C, XM_006719110.5:c.*1127T>C, XM_006719110.4:c.*1127T>C, XM_006719110.3:c.*1127T>C, XM_006719110.2:c.*1127T>C, XM_006719110.1:c.*1127T>C, XM_006719111.3:c.*1127T>C, XM_006719111.2:c.*1127T>C, XM_006719111.1:c.*1127T>C, XM_011520762.2:c.*1127T>C, XM_011520762.1:c.*1127T>C, XM_047429156.1:c.*1127T>C, XM_047429153.1:c.*1127T>C, XM_047429154.1:c.*1127T>C

Select item 147975739614.

rs1479757396 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 12:16548392 (GRCh38)
12:16701326 (GRCh37)
Canonical SPDI:: NC_000012.12:16548391:T:G
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.16548392T>G, NC_000012.11:g.16701326T>G, NG_029785.2:g.64823A>C, NM_018640.5:c.*2830A>C, NM_018640.4:c.*2830A>C, NM_001001395.2:c.*2830A>C, NM_001243611.1:c.*2830A>C, NR_045012.1:n.3747A>C, NM_001243609.1:c.*2830A>C, NR_045013.1:n.3563A>C, NM_001243613.1:c.*2830A>C, NR_045014.1:n.3496A>C, NM_001243612.1:c.*2830A>C, NM_001243610.1:c.*2830A>C, XM_006719110.5:c.*2830A>C, XM_006719110.1:c.*2830A>C, XM_006719111.3:c.*2830A>C, XM_006719111.1:c.*2830A>C, XM_011520762.2:c.*2830A>C, XM_047429156.1:c.*2830A>C, XM_047429153.1:c.*2830A>C, XM_047429154.1:c.*2830A>C

Select item 147864712315.

rs1478647123 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:16550054 (GRCh38)
12:16702988 (GRCh37)
Canonical SPDI:: NC_000012.12:16550053:T:C
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000546/1 (Korea1K)
C=0.000684/2 (KOREAN)
C=0.000849/14 (TOMMO)
HGVS:: NC_000012.12:g.16550054T>C, NC_000012.11:g.16702988T>C, NG_029785.2:g.63161A>G, NM_018640.5:c.*1168A>G, NM_018640.4:c.*1168A>G, NM_001001395.2:c.*1168A>G, NM_001243611.1:c.*1168A>G, NR_045012.1:n.2085A>G, NM_001243609.1:c.*1168A>G, NR_045013.1:n.1901A>G, NM_001243613.1:c.*1168A>G, NR_045014.1:n.1834A>G, NM_001243612.1:c.*1168A>G, NM_001243610.1:c.*1168A>G, XM_006719110.5:c.*1168A>G, XM_006719110.4:c.*1168A>G, XM_006719110.3:c.*1168A>G, XM_006719110.2:c.*1168A>G, XM_006719110.1:c.*1168A>G, XM_006719111.3:c.*1168A>G, XM_006719111.2:c.*1168A>G, XM_006719111.1:c.*1168A>G, XM_011520762.2:c.*1168A>G, XM_011520762.1:c.*1168A>G, XM_047429156.1:c.*1168A>G, XM_047429153.1:c.*1168A>G, XM_047429154.1:c.*1168A>G

Select item 147852606216.

rs1478526062 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:16548966 (GRCh38)
12:16701900 (GRCh37)
Canonical SPDI:: NC_000012.12:16548965:T:C
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000012.12:g.16548966T>C, NC_000012.11:g.16701900T>C, NG_029785.2:g.64249A>G, NM_018640.5:c.*2256A>G, NM_018640.4:c.*2256A>G, NM_001001395.2:c.*2256A>G, NM_001243611.1:c.*2256A>G, NR_045012.1:n.3173A>G, NM_001243609.1:c.*2256A>G, NR_045013.1:n.2989A>G, NM_001243613.1:c.*2256A>G, NR_045014.1:n.2922A>G, NM_001243612.1:c.*2256A>G, NM_001243610.1:c.*2256A>G, XM_006719110.5:c.*2256A>G, XM_006719110.4:c.*2256A>G, XM_006719110.3:c.*2256A>G, XM_006719110.2:c.*2256A>G, XM_006719110.1:c.*2256A>G, XM_006719111.3:c.*2256A>G, XM_006719111.2:c.*2256A>G, XM_006719111.1:c.*2256A>G, XM_011520762.2:c.*2256A>G, XM_011520762.1:c.*2256A>G, XM_047429156.1:c.*2256A>G, XM_047429153.1:c.*2256A>G, XM_047429154.1:c.*2256A>G

Select item 147730880017.

rs1477308800 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATACA>- [Show Flanks]
Chromosome:: 12:16550922 (GRCh38)
12:16703856 (GRCh37)
Canonical SPDI:: NC_000012.12:16550917:TACAATACA:TACA
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TACA=0./0 (ALFA)
-=0.00003/8 (TOPMED)
-=0.000057/8 (GnomAD)
HGVS:: NC_000012.12:g.16550922_16550926del, NC_000012.11:g.16703856_16703860del, NG_029785.2:g.62293_62297del, NM_018640.5:c.*300_*304del, NM_018640.4:c.*300_*304del, NM_001001395.2:c.*300_*304del, NM_001243611.1:c.*300_*304del, NR_045012.1:n.1217_1221del, NM_001243609.1:c.*300_*304del, NR_045013.1:n.1033_1037del, NM_001243613.1:c.*300_*304del, NR_045014.1:n.966_970del, NM_001243612.1:c.*300_*304del, NM_001243610.1:c.*300_*304del, XM_006719110.5:c.*300_*304del, XM_006719110.4:c.*300_*304del, XM_006719110.3:c.*300_*304del, XM_006719110.2:c.*300_*304del, XM_006719110.1:c.*300_*304del, XM_006719111.3:c.*300_*304del, XM_006719111.2:c.*300_*304del, XM_006719111.1:c.*300_*304del, XM_011520762.2:c.*300_*304del, XM_011520762.1:c.*300_*304del, XM_047429156.1:c.*300_*304del, XM_047429153.1:c.*300_*304del, XM_047429154.1:c.*300_*304del

Select item 147539895918.

rs1475398959 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:16551191 (GRCh38)
12:16704125 (GRCh37)
Canonical SPDI:: NC_000012.12:16551190:T:C
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.16551191T>C, NC_000012.11:g.16704125T>C, NG_029785.2:g.62024A>G, NM_018640.5:c.*31A>G, NM_018640.4:c.*31A>G, NM_001001395.2:c.*31A>G, NM_001243611.1:c.*31A>G, NR_045012.1:n.948A>G, NM_001243609.1:c.*31A>G, NR_045013.1:n.764A>G, NM_001243613.1:c.*31A>G, NR_045014.1:n.697A>G, NM_001243612.1:c.*31A>G, NM_001243610.1:c.*31A>G, XM_006719110.5:c.*31A>G, XM_006719110.4:c.*31A>G, XM_006719110.3:c.*31A>G, XM_006719110.2:c.*31A>G, XM_006719110.1:c.*31A>G, XM_006719111.3:c.*31A>G, XM_006719111.2:c.*31A>G, XM_006719111.1:c.*31A>G, XM_011520762.2:c.*31A>G, XM_011520762.1:c.*31A>G, XM_047429156.1:c.*31A>G, XM_047429153.1:c.*31A>G, XM_047429154.1:c.*31A>G

Select item 147383523819.

rs1473835238 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:16548685 (GRCh38)
12:16701619 (GRCh37)
Canonical SPDI:: NC_000012.12:16548684:G:A
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000023/6 (TOPMED)
HGVS:: NC_000012.12:g.16548685G>A, NC_000012.11:g.16701619G>A, NG_029785.2:g.64530C>T, NM_018640.5:c.*2537C>T, NM_018640.4:c.*2537C>T, NM_001001395.2:c.*2537C>T, NM_001243611.1:c.*2537C>T, NR_045012.1:n.3454C>T, NM_001243609.1:c.*2537C>T, NR_045013.1:n.3270C>T, NM_001243613.1:c.*2537C>T, NR_045014.1:n.3203C>T, NM_001243612.1:c.*2537C>T, NM_001243610.1:c.*2537C>T, XM_006719110.5:c.*2537C>T, XM_006719110.4:c.*2537C>T, XM_006719110.3:c.*2537C>T, XM_006719110.2:c.*2537C>T, XM_006719110.1:c.*2537C>T, XM_006719111.3:c.*2537C>T, XM_006719111.2:c.*2537C>T, XM_006719111.1:c.*2537C>T, XM_011520762.2:c.*2537C>T, XM_011520762.1:c.*2537C>T, XM_047429156.1:c.*2537C>T, XM_047429153.1:c.*2537C>T, XM_047429154.1:c.*2537C>T

Select item 147340159720.

rs1473401597 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 12:16549441 (GRCh38)
12:16702375 (GRCh37)
Canonical SPDI:: NC_000012.12:16549440:T:G
Gene:: MGST1 (Varview), LMO3 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.16549441T>G, NC_000012.11:g.16702375T>G, NG_029785.2:g.63774A>C, NM_018640.5:c.*1781A>C, NM_018640.4:c.*1781A>C, NM_001001395.2:c.*1781A>C, NM_001243611.1:c.*1781A>C, NR_045012.1:n.2698A>C, NM_001243609.1:c.*1781A>C, NR_045013.1:n.2514A>C, NM_001243613.1:c.*1781A>C, NR_045014.1:n.2447A>C, NM_001243612.1:c.*1781A>C, NM_001243610.1:c.*1781A>C, XM_006719110.5:c.*1781A>C, XM_006719110.4:c.*1781A>C, XM_006719110.3:c.*1781A>C, XM_006719110.2:c.*1781A>C, XM_006719110.1:c.*1781A>C, XM_006719111.3:c.*1781A>C, XM_006719111.2:c.*1781A>C, XM_006719111.1:c.*1781A>C, XM_011520762.2:c.*1781A>C, XM_011520762.1:c.*1781A>C, XM_047429156.1:c.*1781A>C, XM_047429153.1:c.*1781A>C, XM_047429154.1:c.*1781A>C

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