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Links from Nucleotide

Items: 1 to 20 of 796

3.

rs1489562533 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    G>A,C [Show Flanks]
    Chromosome:
    6:111873095 (GRCh38)
    6:112194298 (GRCh37)
    Canonical SPDI:
    NC_000006.12:111873094:G:A,NC_000006.12:111873094:G:C
    Gene:
    FYN (Varview), LOC102724646 (Varview)
    Functional Consequence:
    genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,5_prime_UTR_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    C=0./0 (ALFA)
    C=0.000008/2 (TOPMED)
    HGVS:
    4.

    rs1488606612 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      C>G [Show Flanks]
      Chromosome:
      6:111873116 (GRCh38)
      6:112194319 (GRCh37)
      Canonical SPDI:
      NC_000006.12:111873115:C:G
      Gene:
      FYN (Varview), LOC102724646 (Varview)
      Functional Consequence:
      genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,5_prime_UTR_variant
      Validated:
      by frequency,by alfa
      MAF:
      G=0./0 (ALFA)
      G=0.000004/1 (TOPMED)
      HGVS:
      6.

      rs1488036410 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        C>A,T [Show Flanks]
        Chromosome:
        6:111873058 (GRCh38)
        6:112194261 (GRCh37)
        Canonical SPDI:
        NC_000006.12:111873057:C:A,NC_000006.12:111873057:C:T
        Gene:
        FYN (Varview), LOC102724646 (Varview)
        Functional Consequence:
        genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,5_prime_UTR_variant
        Validated:
        by frequency,by alfa
        MAF:
        T=0./0 (ALFA)
        T=0.000029/4 (GnomAD)
        HGVS:
        7.

        rs1487651097 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          G>A [Show Flanks]
          Chromosome:
          6:111873426 (GRCh38)
          6:112194629 (GRCh37)
          Canonical SPDI:
          NC_000006.12:111873425:G:A
          Gene:
          FYN (Varview), LOC102724646 (Varview)
          Functional Consequence:
          genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,5_prime_UTR_variant
          Validated:
          by frequency,by alfa
          MAF:
          A=0./0 (ALFA)
          A=0.000036/5 (GnomAD)
          HGVS:
          8.

          rs1487079283 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            A>G,T [Show Flanks]
            Chromosome:
            6:111660815 (GRCh38)
            6:111982018 (GRCh37)
            Canonical SPDI:
            NC_000006.12:111660814:A:G,NC_000006.12:111660814:A:T
            Gene:
            FYN (Varview)
            Functional Consequence:
            3_prime_UTR_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            T=0./0 (ALFA)
            G=0.000007/1 (GnomAD)
            HGVS:
            NC_000006.12:g.111660815A>G, NC_000006.12:g.111660815A>T, NC_000006.11:g.111982018A>G, NC_000006.11:g.111982018A>T, NM_002037.5:c.*924T>C, NM_002037.5:c.*924T>A, XM_005266892.5:c.*924T>C, XM_005266892.5:c.*924T>A, XM_005266892.4:c.*924T>C, XM_005266892.4:c.*924T>A, XM_005266892.3:c.*924T>C, XM_005266892.3:c.*924T>A, XM_005266892.2:c.*924T>C, XM_005266892.2:c.*924T>A, XM_005266892.1:c.*924T>C, XM_005266892.1:c.*924T>A, NM_153047.4:c.*924T>C, NM_153047.4:c.*924T>A, NM_153047.3:c.*924T>C, NM_153047.3:c.*924T>A, NM_153048.4:c.*924T>C, NM_153048.4:c.*924T>A, NM_153048.3:c.*924T>C, NM_153048.3:c.*924T>A, XM_017010651.2:c.*924T>C, XM_017010651.2:c.*924T>A, XM_017010651.1:c.*924T>C, XM_017010651.1:c.*924T>A, XM_017010652.2:c.*924T>C, XM_017010652.2:c.*924T>A, XM_017010652.1:c.*924T>C, XM_017010652.1:c.*924T>A, XM_017010650.2:c.*924T>C, XM_017010650.2:c.*924T>A, XM_017010650.1:c.*924T>C, XM_017010650.1:c.*924T>A, XM_017010653.2:c.*924T>C, XM_017010653.2:c.*924T>A, XM_017010653.1:c.*924T>C, XM_017010653.1:c.*924T>A, XM_047418567.1:c.*924T>C, XM_047418567.1:c.*924T>A, XM_047418566.1:c.*924T>C, XM_047418566.1:c.*924T>A, XM_047418565.1:c.*924T>C, XM_047418565.1:c.*924T>A, XM_047418571.1:c.*924T>C, XM_047418571.1:c.*924T>A, XM_047418563.1:c.*924T>C, XM_047418563.1:c.*924T>A, XM_047418570.1:c.*924T>C, XM_047418570.1:c.*924T>A, XM_047418562.1:c.*924T>C, XM_047418562.1:c.*924T>A, XM_047418561.1:c.*924T>C, XM_047418561.1:c.*924T>A, XM_047418569.1:c.*924T>C, XM_047418569.1:c.*924T>A, XM_047418568.1:c.*924T>C, XM_047418568.1:c.*924T>A, XM_047418572.1:c.*924T>C, XM_047418572.1:c.*924T>A, NM_001370529.1:c.*924T>C, NM_001370529.1:c.*924T>A, XM_047418573.1:c.*924T>C, XM_047418573.1:c.*924T>A
            9.

            rs1486932184 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              G>A,T [Show Flanks]
              Chromosome:
              6:111873343 (GRCh38)
              6:112194546 (GRCh37)
              Canonical SPDI:
              NC_000006.12:111873342:G:A,NC_000006.12:111873342:G:T
              Gene:
              FYN (Varview), LOC102724646 (Varview)
              Functional Consequence:
              genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,5_prime_UTR_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              T=0./0 (ALFA)
              A=0.000004/1 (TOPMED)
              HGVS:
              11.

              rs1486667187 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                C>A [Show Flanks]
                Chromosome:
                6:111873193 (GRCh38)
                6:112194396 (GRCh37)
                Canonical SPDI:
                NC_000006.12:111873192:C:A
                Gene:
                FYN (Varview), LOC102724646 (Varview)
                Functional Consequence:
                genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,5_prime_UTR_variant
                Validated:
                by frequency,by alfa
                MAF:
                A=0./0 (ALFA)
                A=0.000015/2 (GnomAD)
                HGVS:
                12.

                rs1485674830 [Homo sapiens]
                  Variant type:
                  DELINS
                  Alleles:
                  TTT>-,TTTT [Show Flanks]
                  Chromosome:
                  6:111660549 (GRCh38)
                  6:111981752 (GRCh37)
                  Canonical SPDI:
                  NC_000006.12:111660545:TTTTTT:TTT,NC_000006.12:111660545:TTTTTT:TTTTTTT
                  Gene:
                  FYN (Varview)
                  Functional Consequence:
                  3_prime_UTR_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  TTTTTTT=0./0 (ALFA)
                  -=0.000004/1 (TOPMED)
                  -=0.000007/1 (GnomAD)
                  HGVS:
                  NC_000006.12:g.111660549_111660551del, NC_000006.12:g.111660551dup, NC_000006.11:g.111981752_111981754del, NC_000006.11:g.111981754dup, NM_002037.5:c.*1191_*1193del, NM_002037.5:c.*1193dup, XM_005266892.5:c.*1191_*1193del, XM_005266892.5:c.*1193dup, XM_005266892.2:c.*1191_*1193del, XM_005266892.2:c.*1193dup, XM_005266892.1:c.*1191_*1193del, XM_005266892.1:c.*1193dup, NM_153047.4:c.*1191_*1193del, NM_153047.4:c.*1193dup, NM_153047.3:c.*1191_*1193del, NM_153047.3:c.*1193dup, NM_153048.4:c.*1191_*1193del, NM_153048.4:c.*1193dup, NM_153048.3:c.*1191_*1193del, NM_153048.3:c.*1193dup, XM_017010651.2:c.*1191_*1193del, XM_017010651.2:c.*1193dup, XM_017010652.2:c.*1191_*1193del, XM_017010652.2:c.*1193dup, XM_017010650.2:c.*1191_*1193del, XM_017010650.2:c.*1193dup, XM_017010653.2:c.*1191_*1193del, XM_017010653.2:c.*1193dup, XM_047418567.1:c.*1191_*1193del, XM_047418567.1:c.*1193dup, XM_047418566.1:c.*1191_*1193del, XM_047418566.1:c.*1193dup, XM_047418565.1:c.*1191_*1193del, XM_047418565.1:c.*1193dup, XM_047418571.1:c.*1191_*1193del, XM_047418571.1:c.*1193dup, XM_047418563.1:c.*1191_*1193del, XM_047418563.1:c.*1193dup, XM_047418570.1:c.*1191_*1193del, XM_047418570.1:c.*1193dup, XM_047418562.1:c.*1191_*1193del, XM_047418562.1:c.*1193dup, XM_047418561.1:c.*1191_*1193del, XM_047418561.1:c.*1193dup, XM_047418569.1:c.*1191_*1193del, XM_047418569.1:c.*1193dup, XM_047418568.1:c.*1191_*1193del, XM_047418568.1:c.*1193dup, XM_047418572.1:c.*1191_*1193del, XM_047418572.1:c.*1193dup, NM_001370529.1:c.*1191_*1193del, NM_001370529.1:c.*1193dup, XM_047418573.1:c.*1191_*1193del, XM_047418573.1:c.*1193dup
                  14.

                  rs1484267673 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    G>A [Show Flanks]
                    Chromosome:
                    6:111696411 (GRCh38)
                    6:112017614 (GRCh37)
                    Canonical SPDI:
                    NC_000006.12:111696410:G:A
                    Gene:
                    FYN (Varview)
                    Functional Consequence:
                    coding_sequence_variant,missense_variant
                    Validated:
                    by frequency,by alfa,by cluster
                    MAF:
                    A=0.0002/1 (ALFA)
                    A=0.0002/1 (Estonian)
                    HGVS:
                    NC_000006.12:g.111696411G>A, NC_000006.11:g.112017614G>A, NM_002037.5:c.908C>T, XM_005266892.5:c.743C>T, XM_005266892.4:c.743C>T, XM_005266892.3:c.743C>T, XM_005266892.2:c.743C>T, XM_005266892.1:c.743C>T, NM_153047.4:c.899C>T, NM_153047.3:c.899C>T, NM_153048.4:c.743C>T, NM_153048.3:c.743C>T, XM_017010651.2:c.908C>T, XM_017010651.1:c.908C>T, XM_017010652.2:c.908C>T, XM_017010652.1:c.908C>T, XM_017010650.2:c.908C>T, XM_017010650.1:c.908C>T, XM_017010653.2:c.908C>T, XM_017010653.1:c.908C>T, XM_047418567.1:c.908C>T, XM_047418566.1:c.908C>T, XM_047418565.1:c.908C>T, XM_047418571.1:c.899C>T, XM_047418563.1:c.908C>T, XM_047418570.1:c.899C>T, XM_047418562.1:c.908C>T, XM_047418561.1:c.908C>T, XM_047418569.1:c.899C>T, XM_047418568.1:c.899C>T, XM_047418572.1:c.743C>T, NM_001370529.1:c.908C>T, XM_047418573.1:c.623C>T, NM_001242779.1:c.752C>T, NP_002028.1:p.Pro303Leu, XP_005266949.1:p.Pro248Leu, NP_694592.1:p.Pro300Leu, NP_694593.1:p.Pro248Leu, XP_016866140.1:p.Pro303Leu, XP_016866141.1:p.Pro303Leu, XP_016866139.1:p.Pro303Leu, XP_016866142.1:p.Pro303Leu, XP_047274523.1:p.Pro303Leu, XP_047274522.1:p.Pro303Leu, XP_047274521.1:p.Pro303Leu, XP_047274527.1:p.Pro300Leu, XP_047274519.1:p.Pro303Leu, XP_047274526.1:p.Pro300Leu, XP_047274518.1:p.Pro303Leu, XP_047274517.1:p.Pro303Leu, XP_047274525.1:p.Pro300Leu, XP_047274524.1:p.Pro300Leu, XP_047274528.1:p.Pro248Leu, NP_001357458.1:p.Pro303Leu, XP_047274529.1:p.Pro208Leu
                    17.

                    rs1482432078 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      G>A [Show Flanks]
                      Chromosome:
                      6:111873198 (GRCh38)
                      6:112194401 (GRCh37)
                      Canonical SPDI:
                      NC_000006.12:111873197:G:A
                      Gene:
                      FYN (Varview), LOC102724646 (Varview)
                      Functional Consequence:
                      genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,5_prime_UTR_variant
                      Validated:
                      by frequency,by alfa
                      MAF:
                      A=0./0 (ALFA)
                      HGVS:
                      19.

                      rs1478106072 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        G>C,T [Show Flanks]
                        Chromosome:
                        6:111873170 (GRCh38)
                        6:112194373 (GRCh37)
                        Canonical SPDI:
                        NC_000006.12:111873169:G:C,NC_000006.12:111873169:G:T
                        Gene:
                        FYN (Varview), LOC102724646 (Varview)
                        Functional Consequence:
                        upstream_transcript_variant,genic_upstream_transcript_variant,5_prime_UTR_variant,2KB_upstream_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        T=0./0 (ALFA)
                        C=0.000004/1 (TOPMED)
                        C=0.000007/1 (GnomAD)
                        HGVS:

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