SNP Links for Nucleotide (Select 378548194) - SNP

Links from Nucleotide

Items: 1 to 20 of 150

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Select item 14885381931.

rs1488538193 [Homo sapiens]

Variant type:: DEL
Alleles:: AA>- [Show Flanks]
Chromosome:: 4:73508979 (GRCh38)
4:74374696 (GRCh37)
Canonical SPDI:: NC_000004.12:73508978:AA:
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000021/3 (GnomAD)
-=0.000023/6 (TOPMED)
HGVS:: NC_000004.12:g.73508979_73508980del, NC_000004.11:g.74374696_74374697del, NR_046377.1:n.177_178del

Select item 14880546562.

rs1488054656 [Homo sapiens]

Variant type:: DELINS
Alleles:: AGA>- [Show Flanks]
Chromosome:: 4:73509195 (GRCh38)
4:74374912 (GRCh37)
Canonical SPDI:: NC_000004.12:73509189:GAAGAAGA:GAAGA
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAAGA=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
-=0.000142/2 (TOMMO)
HGVS:: NC_000004.12:g.73509192AGA[1], NC_000004.11:g.74374909AGA[1], NR_046377.1:n.390AGA[1]

Select item 14796146293.

rs1479614629 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 4:73509690 (GRCh38)
4:74375407 (GRCh37)
Canonical SPDI:: NC_000004.12:73509689:C:A
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.73509690C>A, NC_000004.11:g.74375407C>A, NR_046377.1:n.466C>A

Select item 14708086464.

rs1470808646 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:73510263 (GRCh38)
4:74375980 (GRCh37)
Canonical SPDI:: NC_000004.12:73510262:A:G
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.73510263A>G, NC_000004.11:g.74375980A>G, NR_046377.1:n.562A>G

Select item 14686464035.

rs1468646403 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 4:73528493 (GRCh38)
4:74394210 (GRCh37)
Canonical SPDI:: NC_000004.12:73528492:T:G
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.73528493T>G, NC_000004.11:g.74394210T>G, NR_046377.1:n.723T>G

Select item 14601594876.

rs1460159487 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:73528461 (GRCh38)
4:74394178 (GRCh37)
Canonical SPDI:: NC_000004.12:73528460:T:C
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000036/5 (GnomAD)
C=0.000038/10 (TOPMED)
HGVS:: NC_000004.12:g.73528461T>C, NC_000004.11:g.74394178T>C, NR_046377.1:n.691T>C

Select item 14542199037.

rs1454219903 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:73508958 (GRCh38)
4:74374675 (GRCh37)
Canonical SPDI:: NC_000004.12:73508957:A:G
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000042/11 (TOPMED)
G=0.000064/9 (GnomAD)
HGVS:: NC_000004.12:g.73508958A>G, NC_000004.11:g.74374675A>G, NR_046377.1:n.156A>G

Select item 14460406978.

rs1446040697 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 4:73528531 (GRCh38)
4:74394248 (GRCh37)
Canonical SPDI:: NC_000004.12:73528530:G:A,NC_000004.12:73528530:G:C
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
C=0.000035/1 (TOMMO)
HGVS:: NC_000004.12:g.73528531G>A, NC_000004.12:g.73528531G>C, NC_000004.11:g.74394248G>A, NC_000004.11:g.74394248G>C, NR_046377.1:n.761G>A, NR_046377.1:n.761G>C

Select item 14455089939.

rs1445508993 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:73508865 (GRCh38)
4:74374582 (GRCh37)
Canonical SPDI:: NC_000004.12:73508864:G:A
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.73508865G>A, NC_000004.11:g.74374582G>A, NR_046377.1:n.63G>A

Select item 144283855710.

rs1442838557 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:73510216 (GRCh38)
4:74375933 (GRCh37)
Canonical SPDI:: NC_000004.12:73510215:G:A
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.73510216G>A, NC_000004.11:g.74375933G>A, NR_046377.1:n.515G>A

Select item 144147498111.

rs1441474981 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GGAGG [Show Flanks]
Chromosome:: 4:73509198 (GRCh38)
4:74374916 (GRCh37)
Canonical SPDI:: NC_000004.12:73509198:GGAGG:GGAGGGGAGG
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGAGGGGAGG=0.000071/1 (ALFA)
GGAGG=0.000007/1 (GnomAD)
GGAGG=0.000019/5 (TOPMED)
HGVS:: NC_000004.12:g.73509199_73509203dup, NC_000004.11:g.74374916_74374920dup, NR_046377.1:n.397_401dup

Select item 143398522712.

rs1433985227 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 4:73510327 (GRCh38)
4:74376044 (GRCh37)
Canonical SPDI:: NC_000004.12:73510326:A:C
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.73510327A>C, NC_000004.11:g.74376044A>C, NR_046377.1:n.626A>C

Select item 143236768713.

rs1432367687 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:73509000 (GRCh38)
4:74374717 (GRCh37)
Canonical SPDI:: NC_000004.12:73508999:A:G
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000004.12:g.73509000A>G, NC_000004.11:g.74374717A>G, NR_046377.1:n.198A>G

Select item 142715404214.

rs1427154042 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:73508848 (GRCh38)
4:74374565 (GRCh37)
Canonical SPDI:: NC_000004.12:73508847:A:G
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.73508848A>G, NC_000004.11:g.74374565A>G, NR_046377.1:n.46A>G

Select item 142679493715.

rs1426794937 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 4:73509138 (GRCh38)
4:74374855 (GRCh37)
Canonical SPDI:: NC_000004.12:73509137:C:G
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.73509138C>G, NC_000004.11:g.74374855C>G, NR_046377.1:n.336C>G

Select item 142677530316.

rs1426775303 [Homo sapiens]

Variant type:: DELINS
Alleles:: CAAACCACAGTTA>- [Show Flanks]
Chromosome:: 4:73510255 (GRCh38)
4:74375972 (GRCh37)
Canonical SPDI:: NC_000004.12:73510252:TACAAACCACAGTTA:TA
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.73510255_73510267del, NC_000004.11:g.74375972_74375984del, NR_046377.1:n.554_566del

Select item 142607360217.

rs1426073602 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:73510225 (GRCh38)
4:74375942 (GRCh37)
Canonical SPDI:: NC_000004.12:73510224:T:C
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000066/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.000223/1 (Estonian)
HGVS:: NC_000004.12:g.73510225T>C, NC_000004.11:g.74375942T>C, NR_046377.1:n.524T>C

Select item 140927599318.

rs1409275993 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 4:73509124 (GRCh38)
4:74374841 (GRCh37)
Canonical SPDI:: NC_000004.12:73509123:T:C,NC_000004.12:73509123:T:G
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
C=0.000106/2 (TOMMO)
HGVS:: NC_000004.12:g.73509124T>C, NC_000004.12:g.73509124T>G, NC_000004.11:g.74374841T>C, NC_000004.11:g.74374841T>G, NR_046377.1:n.322T>C, NR_046377.1:n.322T>G

Select item 140803300419.

rs1408033004 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 4:73510244 (GRCh38)
4:74375961 (GRCh37)
Canonical SPDI:: NC_000004.12:73510243:A:G,NC_000004.12:73510243:A:T
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.73510244A>G, NC_000004.12:g.73510244A>T, NC_000004.11:g.74375961A>G, NC_000004.11:g.74375961A>T, NR_046377.1:n.543A>G, NR_046377.1:n.543A>T

Select item 140679887020.

rs1406798870 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:73509227 (GRCh38)
4:74374944 (GRCh37)
Canonical SPDI:: NC_000004.12:73509226:G:A
Gene:: LINC02499 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000011/3 (TOPMED)
A=0.001667/1 (NorthernSweden)
HGVS:: NC_000004.12:g.73509227G>A, NC_000004.11:g.74374944G>A, NR_046377.1:n.425G>A

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Links from Nucleotide

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