SNP Links for Nucleotide (Select 52218853) - SNP

Links from Nucleotide

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Select item 14843052961.

rs1484305296 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:104599246 (GRCh38)
9:107361527 (GRCh37)
Canonical SPDI:: NC_000009.12:104599245:G:A
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.104599246G>A, NC_000009.11:g.107361527G>A, NM_001004482.1:c.168C>T

Select item 14836275852.

rs1483627585 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AT [Show Flanks]
Chromosome:: 9:104598666 (GRCh38)
9:107360948 (GRCh37)
Canonical SPDI:: NC_000009.12:104598666:TAT:TATAT
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: coding_sequence_variant,stop_gained,intron_variant
Validated:: by frequency,by cluster
MAF:: TA=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.104598668_104598669dup, NC_000009.11:g.107360949_107360950dup, NM_001004482.1:c.746_747dup, NP_001004482.1:p.Thr250Ter

Select item 14820025623.

rs1482002562 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:104598498 (GRCh38)
9:107360779 (GRCh37)
Canonical SPDI:: NC_000009.12:104598497:C:T
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000028/1 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.104598498C>T, NC_000009.11:g.107360779C>T, NM_001004482.1:c.916G>A, NP_001004482.1:p.Ala306Thr

Select item 14799020174.

rs1479902017 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:104598561 (GRCh38)
9:107360842 (GRCh37)
Canonical SPDI:: NC_000009.12:104598560:T:C
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000009.12:g.104598561T>C, NC_000009.11:g.107360842T>C, NM_001004482.1:c.853A>G, NP_001004482.1:p.Arg285Gly

Select item 14731222475.

rs1473122247 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:104599128 (GRCh38)
9:107361409 (GRCh37)
Canonical SPDI:: NC_000009.12:104599127:C:T
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000009.12:g.104599128C>T, NC_000009.11:g.107361409C>T, NM_001004482.1:c.286G>A, NP_001004482.1:p.Gly96Ser

Select item 14730525486.

rs1473052548 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:104599222 (GRCh38)
9:107361503 (GRCh37)
Canonical SPDI:: NC_000009.12:104599221:C:T
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.104599222C>T, NC_000009.11:g.107361503C>T, NM_001004482.1:c.192G>A

Select item 14717646997.

rs1471764699 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:104598739 (GRCh38)
9:107361020 (GRCh37)
Canonical SPDI:: NC_000009.12:104598738:G:A
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.104598739G>A, NC_000009.11:g.107361020G>A, NM_001004482.1:c.675C>T

Select item 14687839268.

rs1468783926 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 9:104599193 (GRCh38)
9:107361474 (GRCh37)
Canonical SPDI:: NC_000009.12:104599192:G:T
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
HGVS:: NC_000009.12:g.104599193G>T, NC_000009.11:g.107361474G>T, NM_001004482.1:c.221C>A, NP_001004482.1:p.Thr74Asn

Select item 14671723069.

rs1467172306 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:104599187 (GRCh38)
9:107361468 (GRCh37)
Canonical SPDI:: NC_000009.12:104599186:G:A
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000354/6 (TOMMO)
HGVS:: NC_000009.12:g.104599187G>A, NC_000009.11:g.107361468G>A, NM_001004482.1:c.227C>T, NP_001004482.1:p.Thr76Ile

Select item 146665527310.

rs1466655273 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:104598950 (GRCh38)
9:107361231 (GRCh37)
Canonical SPDI:: NC_000009.12:104598949:T:C
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.104598950T>C, NC_000009.11:g.107361231T>C, NM_001004482.1:c.464A>G, NP_001004482.1:p.Asn155Ser

Select item 146532271611.

rs1465322716 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:104599042 (GRCh38)
9:107361323 (GRCh37)
Canonical SPDI:: NC_000009.12:104599041:C:T
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.0006/5 (ALFA)
HGVS:: NC_000009.12:g.104599042C>T, NC_000009.11:g.107361323C>T, NM_001004482.1:c.372G>A

Select item 145823427612.

rs1458234276 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:104598534 (GRCh38)
9:107360815 (GRCh37)
Canonical SPDI:: NC_000009.12:104598533:A:G
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.104598534A>G, NC_000009.11:g.107360815A>G, NM_001004482.1:c.880T>C

Select item 145709776113.

rs1457097761 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:104599216 (GRCh38)
9:107361497 (GRCh37)
Canonical SPDI:: NC_000009.12:104599215:G:A
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,synonymous_variant
HGVS:: NC_000009.12:g.104599216G>A, NC_000009.11:g.107361497G>A, NM_001004482.1:c.198C>T

Select item 145582390314.

rs1455823903 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:104599401 (GRCh38)
9:107361682 (GRCh37)
Canonical SPDI:: NC_000009.12:104599400:T:A
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.104599401T>A, NC_000009.11:g.107361682T>A, NM_001004482.1:c.13A>T, NP_001004482.1:p.Asn5Tyr

Select item 145514047415.

rs1455140474 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:104598493 (GRCh38)
9:107360774 (GRCh37)
Canonical SPDI:: NC_000009.12:104598492:T:A
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.104598493T>A, NC_000009.11:g.107360774T>A, NM_001004482.1:c.921A>T

Select item 145137489216.

rs1451374892 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 9:104598888 (GRCh38)
9:107361169 (GRCh37)
Canonical SPDI:: NC_000009.12:104598887:G:T
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000009.12:g.104598888G>T, NC_000009.11:g.107361169G>T, NM_001004482.1:c.526C>A, NP_001004482.1:p.His176Asn

Select item 144846468817.

rs1448464688 [Homo sapiens]

Variant type:: INS
Alleles:: ->CCTT [Show Flanks]
Chromosome:: 9:104599252 (GRCh38)
9:107361534 (GRCh37)
Canonical SPDI:: NC_000009.12:104599252::CCTT
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,frameshift_variant
HGVS:: NC_000009.12:g.104599252_104599253insCCTT, NC_000009.11:g.107361533_107361534insCCTT, NM_001004482.1:c.161_162insAAGG, NP_001004482.1:p.His54fs

Select item 144304755518.

rs1443047555 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:104599304 (GRCh38)
9:107361585 (GRCh37)
Canonical SPDI:: NC_000009.12:104599303:A:G
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000009.12:g.104599304A>G, NC_000009.11:g.107361585A>G, NM_001004482.1:c.110T>C, NP_001004482.1:p.Val37Ala

Select item 144274125219.

rs1442741252 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 9:104599359 (GRCh38)
9:107361640 (GRCh37)
Canonical SPDI:: NC_000009.12:104599358:C:A
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,intron_variant
HGVS:: NC_000009.12:g.104599359C>A, NC_000009.11:g.107361640C>A, NM_001004482.1:c.55G>T, NP_001004482.1:p.Gly19Cys

Select item 144042034420.

rs1440420344 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: 9:104598782 (GRCh38)
9:107361063 (GRCh37)
Canonical SPDI:: NC_000009.12:104598781:AAA:AA
Gene:: OR13C5 (Varview), LOC107987105 (Varview)
Functional Consequence:: coding_sequence_variant,frameshift_variant,intron_variant
Validated:: by frequency
MAF:: -=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000009.12:g.104598784del, NC_000009.11:g.107361065del, NM_001004482.1:c.632del, NP_001004482.1:p.Leu211fs

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