SNP Links for Nucleotide (Select 523425766) - SNP

Links from Nucleotide

Items: 1 to 20 of 181

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Select item 14885944231.

rs1488594423 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:21303626 (GRCh38)
13:21877765 (GRCh37)
Canonical SPDI:: NC_000013.11:21303625:C:T
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.21303626C>T, NC_000013.10:g.21877765C>T, NR_103840.1:n.797G>A, NR_103841.1:n.474G>A

Select item 14839395812.

rs1483939581 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 13:21344762 (GRCh38)
13:21918901 (GRCh37)
Canonical SPDI:: NC_000013.11:21344761:G:A,NC_000013.11:21344761:G:T
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000029/4 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000013.11:g.21344762G>A, NC_000013.11:g.21344762G>T, NC_000013.10:g.21918901G>A, NC_000013.10:g.21918901G>T, NR_103840.1:n.25C>T, NR_103840.1:n.25C>A, NR_103841.1:n.98C>T, NR_103841.1:n.98C>A

Select item 14824147653.

rs1482414765 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: 13:21303527 (GRCh38)
13:21877666 (GRCh37)
Canonical SPDI:: NC_000013.11:21303526:TTT:TT
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.21303529del, NC_000013.10:g.21877668del, NR_103840.1:n.896del, NR_103841.1:n.573del

Select item 14780735194.

rs1478073519 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:21303722 (GRCh38)
13:21877861 (GRCh37)
Canonical SPDI:: NC_000013.11:21303721:A:G
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000013.11:g.21303722A>G, NC_000013.10:g.21877861A>G, NR_103840.1:n.701T>C, NR_103841.1:n.378T>C

Select item 14775751715.

rs1477575171 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:21303616 (GRCh38)
13:21877755 (GRCh37)
Canonical SPDI:: NC_000013.11:21303615:G:A
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.21303616G>A, NC_000013.10:g.21877755G>A, NR_103840.1:n.807C>T, NR_103841.1:n.484C>T

Select item 14752004596.

rs1475200459 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 13:21344727 (GRCh38)
13:21918866 (GRCh37)
Canonical SPDI:: NC_000013.11:21344726:T:G
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.21344727T>G, NC_000013.10:g.21918866T>G, NR_103840.1:n.60A>C, NR_103841.1:n.133A>C

Select item 14744040297.

rs1474404029 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:21344703 (GRCh38)
13:21918842 (GRCh37)
Canonical SPDI:: NC_000013.11:21344702:G:A
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000013.11:g.21344703G>A, NC_000013.10:g.21918842G>A, NR_103840.1:n.84C>T, NR_103841.1:n.157C>T

Select item 14731623138.

rs1473162313 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 13:21312337 (GRCh38)
13:21886476 (GRCh37)
Canonical SPDI:: NC_000013.11:21312336:G:A,NC_000013.11:21312336:G:C
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.21312337G>A, NC_000013.11:g.21312337G>C, NC_000013.10:g.21886476G>A, NC_000013.10:g.21886476G>C, NR_103840.1:n.339C>T, NR_103840.1:n.339C>G

Select item 14696935389.

rs1469693538 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 13:21311058 (GRCh38)
13:21885197 (GRCh37)
Canonical SPDI:: NC_000013.11:21311057:T:G
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000013.11:g.21311058T>G, NC_000013.10:g.21885197T>G, NR_103840.1:n.586A>C

Select item 146770816510.

rs1467708165 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 13:21303806 (GRCh38)
13:21877945 (GRCh37)
Canonical SPDI:: NC_000013.11:21303805:C:G
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.21303806C>G, NC_000013.10:g.21877945C>G, NR_103840.1:n.617G>C, NR_103841.1:n.294G>C

Select item 146414837911.

rs1464148379 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 13:21303759 (GRCh38)
13:21877898 (GRCh37)
Canonical SPDI:: NC_000013.11:21303758:T:C,NC_000013.11:21303758:T:G
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
HGVS:: NC_000013.11:g.21303759T>C, NC_000013.11:g.21303759T>G, NC_000013.10:g.21877898T>C, NC_000013.10:g.21877898T>G, NR_103840.1:n.664A>G, NR_103840.1:n.664A>C, NR_103841.1:n.341A>G, NR_103841.1:n.341A>C

Select item 145675336812.

rs1456753368 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:21312245 (GRCh38)
13:21886384 (GRCh37)
Canonical SPDI:: NC_000013.11:21312244:G:A
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000671/3 (ALFA)
A=0.000021/3 (GnomAD)
HGVS:: NC_000013.11:g.21312245G>A, NC_000013.10:g.21886384G>A, NR_103840.1:n.431C>T

Select item 144939549913.

rs1449395499 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 13:21312316 (GRCh38)
13:21886455 (GRCh37)
Canonical SPDI:: NC_000013.11:21312315:G:A
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000019/5 (TOPMED)
HGVS:: NC_000013.11:g.21312316G>A, NC_000013.10:g.21886455G>A, NR_103840.1:n.360C>T

Select item 143906993214.

rs1439069932 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 13:21312273 (GRCh38)
13:21886412 (GRCh37)
Canonical SPDI:: NC_000013.11:21312272:G:T
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000013.11:g.21312273G>T, NC_000013.10:g.21886412G>T, NR_103840.1:n.403C>A

Select item 143335380415.

rs1433353804 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 13:21303635 (GRCh38)
13:21877774 (GRCh37)
Canonical SPDI:: NC_000013.11:21303634:C:G,NC_000013.11:21303634:C:T
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.21303635C>G, NC_000013.11:g.21303635C>T, NC_000013.10:g.21877774C>G, NC_000013.10:g.21877774C>T, NR_103840.1:n.788G>C, NR_103840.1:n.788G>A, NR_103841.1:n.465G>C, NR_103841.1:n.465G>A

Select item 143195368816.

rs1431953688 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 13:21303787 (GRCh38)
13:21877926 (GRCh37)
Canonical SPDI:: NC_000013.11:21303786:G:T
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.00008/1 (ALFA)
HGVS:: NC_000013.11:g.21303787G>T, NC_000013.10:g.21877926G>T, NR_103840.1:n.636C>A, NR_103841.1:n.313C>A

Select item 143077447217.

rs1430774472 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 13:21344777 (GRCh38)
13:21918916 (GRCh37)
Canonical SPDI:: NC_000013.11:21344776:T:G
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.21344777T>G, NC_000013.10:g.21918916T>G, NR_103840.1:n.10A>C, NR_103841.1:n.83A>C

Select item 142949935918.

rs1429499359 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 13:21344766 (GRCh38)
13:21918905 (GRCh37)
Canonical SPDI:: NC_000013.11:21344765:C:G
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.21344766C>G, NC_000013.10:g.21918905C>G, NR_103840.1:n.21G>C, NR_103841.1:n.94G>C

Select item 142221857619.

rs1422218576 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:21303612 (GRCh38)
13:21877751 (GRCh37)
Canonical SPDI:: NC_000013.11:21303611:A:G
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000013.11:g.21303612A>G, NC_000013.10:g.21877751A>G, NR_103840.1:n.811T>C, NR_103841.1:n.488T>C

Select item 142152055920.

rs1421520559 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 13:21303712 (GRCh38)
13:21877852 (GRCh37)
Canonical SPDI:: NC_000013.11:21303712:GG:GGG
Gene:: MIPEPP3 (Varview), LINC00539 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGG=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000013.11:g.21303714dup, NC_000013.10:g.21877853dup, NR_103840.1:n.710dup, NR_103841.1:n.387dup

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