SNP Links for Nucleotide (Select 537361091) - SNP

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Links from Nucleotide

Items: 1 to 20 of 122

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Select item 14874954411.

rs1487495441 has merged into rs1189537057 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTCT>-,CT [Show Flanks]
Chromosome:: 6:95577385 (GRCh38)
6:96025261 (GRCh37)
Canonical SPDI:: NC_000006.12:95577382:CTCTCT:CT,NC_000006.12:95577382:CTCTCT:CTCT
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CT=0./0 (ALFA)
-=0.00006/16 (TOPMED)
HGVS:: NC_000006.12:g.95577383CT[1], NC_000006.12:g.95577383CT[2], NC_000006.11:g.96025259CT[1], NC_000006.11:g.96025259CT[2], NR_047502.1:n.64AG[1], NR_047502.1:n.64AG[2], NR_104136.1:n.64AG[1], NR_104136.1:n.64AG[2]

Select item 14838724142.

rs1483872414 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 6:95567288 (GRCh38)
6:96015164 (GRCh37)
Canonical SPDI:: NC_000006.12:95567287:T:G
Gene:: MANEA-DT (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.95567288T>G, NC_000006.11:g.96015164T>G, NR_104136.1:n.385A>C

Select item 14808080443.

rs1480808044 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 6:95577371 (GRCh38)
6:96025247 (GRCh37)
Canonical SPDI:: NC_000006.12:95577370:C:G
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000006.12:g.95577371C>G, NC_000006.11:g.96025247C>G, NR_047502.1:n.81G>C, NR_104136.1:n.81G>C

Select item 14772421294.

rs1477242129 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:95567266 (GRCh38)
6:96015142 (GRCh37)
Canonical SPDI:: NC_000006.12:95567265:G:T
Gene:: MANEA-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.95567266G>T, NC_000006.11:g.96015142G>T, NR_104136.1:n.407C>A

Select item 14724202145.

rs1472420214 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 6:95577243 (GRCh38)
6:96025120 (GRCh37)
Canonical SPDI:: NC_000006.12:95577243:A:AA
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: AA=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.95577244dup, NC_000006.11:g.96025120dup, NR_047502.1:n.208dup, NR_104136.1:n.208dup

Select item 14719902656.

rs1471990265 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 6:95577139 (GRCh38)
6:96025015 (GRCh37)
Canonical SPDI:: NC_000006.12:95577138:T:A
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.95577139T>A, NC_000006.11:g.96025015T>A, NR_047502.1:n.313A>T, NR_104136.1:n.313A>T

Select item 14678673927.

rs1467867392 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:95567255 (GRCh38)
6:96015131 (GRCh37)
Canonical SPDI:: NC_000006.12:95567254:G:A
Gene:: MANEA-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.95567255G>A, NC_000006.11:g.96015131G>A, NR_104136.1:n.418C>T

Select item 14538017578.

rs1453801757 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 6:95577447 (GRCh38)
6:96025324 (GRCh37)
Canonical SPDI:: NC_000006.12:95577447:CCCC:CCCCC
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCC=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.95577451dup, NC_000006.11:g.96025327dup, NR_047502.1:n.4dup, NR_104136.1:n.4dup

Select item 14484915059.

rs1448491505 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 6:95577361 (GRCh38)
6:96025237 (GRCh37)
Canonical SPDI:: NC_000006.12:95577360:C:G
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.95577361C>G, NC_000006.11:g.96025237C>G, NR_047502.1:n.91G>C, NR_104136.1:n.91G>C

Select item 144704351210.

rs1447043512 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:95577114 (GRCh38)
6:96024990 (GRCh37)
Canonical SPDI:: NC_000006.12:95577113:C:T
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000006.12:g.95577114C>T, NC_000006.11:g.96024990C>T, NR_047502.1:n.338G>A, NR_104136.1:n.338G>A

Select item 143775703511.

rs1437757035 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 6:95577257 (GRCh38)
6:96025133 (GRCh37)
Canonical SPDI:: NC_000006.12:95577256:CCC:CC
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.95577259del, NC_000006.11:g.96025135del, NR_047502.1:n.195del, NR_104136.1:n.195del

Select item 143503034112.

rs1435030341 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 6:95577340 (GRCh38)
6:96025216 (GRCh37)
Canonical SPDI:: NC_000006.12:95577339:C:A,NC_000006.12:95577339:C:T
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.95577340C>A, NC_000006.12:g.95577340C>T, NC_000006.11:g.96025216C>A, NC_000006.11:g.96025216C>T, NR_047502.1:n.112G>T, NR_047502.1:n.112G>A, NR_104136.1:n.112G>T, NR_104136.1:n.112G>A

Select item 142596771413.

rs1425967714 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:95577209 (GRCh38)
6:96025085 (GRCh37)
Canonical SPDI:: NC_000006.12:95577208:C:T
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.95577209C>T, NC_000006.11:g.96025085C>T, NR_047502.1:n.243G>A, NR_104136.1:n.243G>A

Select item 142159094514.

rs1421590945 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 6:95577427 (GRCh38)
6:96025303 (GRCh37)
Canonical SPDI:: NC_000006.12:95577426:G:T
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.95577427G>T, NC_000006.11:g.96025303G>T, NR_047502.1:n.25C>A, NR_104136.1:n.25C>A

Select item 141053445715.

rs1410534457 [Homo sapiens]

Variant type:: DELINS
Alleles:: GT>- [Show Flanks]
Chromosome:: 6:95577239 (GRCh38)
6:96025115 (GRCh37)
Canonical SPDI:: NC_000006.12:95577237:TGT:T
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.95577239_95577240del, NC_000006.11:g.96025115_96025116del, NR_047502.1:n.213_214del, NR_104136.1:n.213_214del

Select item 141006250816.

rs1410062508 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:95577358 (GRCh38)
6:96025234 (GRCh37)
Canonical SPDI:: NC_000006.12:95577357:T:C
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0./0 (GnomAD)
C=0.000008/2 (TOPMED)
C=0.000156/1 (1000Genomes)
HGVS:: NC_000006.12:g.95577358T>C, NC_000006.11:g.96025234T>C, NR_047502.1:n.94A>G, NR_104136.1:n.94A>G

Select item 140549807417.

rs1405498074 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:95577387 (GRCh38)
6:96025263 (GRCh37)
Canonical SPDI:: NC_000006.12:95577386:C:T
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.95577387C>T, NC_000006.11:g.96025263C>T, NR_047502.1:n.65G>A, NR_104136.1:n.65G>A

Select item 140396480418.

rs1403964804 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:95577234 (GRCh38)
6:96025110 (GRCh37)
Canonical SPDI:: NC_000006.12:95577233:C:T
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
HGVS:: NC_000006.12:g.95577234C>T, NC_000006.11:g.96025110C>T, NR_047502.1:n.218G>A, NR_104136.1:n.218G>A

Select item 139043503019.

rs1390435030 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:95577111 (GRCh38)
6:96024987 (GRCh37)
Canonical SPDI:: NC_000006.12:95577110:G:A
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000036/5 (GnomAD)
HGVS:: NC_000006.12:g.95577111G>A, NC_000006.11:g.96024987G>A, NR_047502.1:n.341C>T, NR_104136.1:n.341C>T

Select item 138638606420.

rs1386386064 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 6:95577126 (GRCh38)
6:96025002 (GRCh37)
Canonical SPDI:: NC_000006.12:95577125:A:C
Gene:: MANEA (Varview), MANEA-DT (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.95577126A>C, NC_000006.11:g.96025002A>C, NR_047502.1:n.326T>G, NR_104136.1:n.326T>G