SNP Links for Nucleotide (Select 54312127) - SNP

Links from Nucleotide

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Select item 14886401971.

rs1488640197 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:28248225 (GRCh38)
17:26575251 (GRCh37)
Canonical SPDI:: NC_000017.11:28248224:T:C
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000017.11:g.28248225T>C, NC_000017.10:g.26575251T>C, XR_934641.2:n.842A>G, XR_934641.1:n.851A>G, NR_002181.1:n.593T>C, NM_021092.1:c.*527T>C

Select item 14782206422.

rs1478220642 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 17:28248170 (GRCh38)
17:26575196 (GRCh37)
Canonical SPDI:: NC_000017.11:28248169:C:A,NC_000017.11:28248169:C:T
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000017.11:g.28248170C>A, NC_000017.11:g.28248170C>T, NC_000017.10:g.26575196C>A, NC_000017.10:g.26575196C>T, XR_934641.2:n.897G>T, XR_934641.2:n.897G>A, XR_934641.1:n.906G>T, XR_934641.1:n.906G>A, NR_002181.1:n.538C>A, NR_002181.1:n.538C>T, NM_021092.1:c.*472C>A, NM_021092.1:c.*472C>T

Select item 14771006013.

rs1477100601 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 17:28247715 (GRCh38)
17:26574741 (GRCh37)
Canonical SPDI:: NC_000017.11:28247714:C:A
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.28247715C>A, NC_000017.10:g.26574741C>A, XR_934641.2:n.1352G>T, XR_934641.1:n.1361G>T, NR_002181.1:n.272C>A, NM_021092.1:c.*206C>A

Select item 14727224834.

rs1472722483 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:28248231 (GRCh38)
17:26575257 (GRCh37)
Canonical SPDI:: NC_000017.11:28248230:C:T
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000017.11:g.28248231C>T, NC_000017.10:g.26575257C>T, XR_934641.2:n.836G>A, XR_934641.1:n.845G>A, NR_002181.1:n.599C>T, NM_021092.1:c.*533C>T

Select item 14676954445.

rs1467695444 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:28247925 (GRCh38)
17:26574951 (GRCh37)
Canonical SPDI:: NC_000017.11:28247924:G:A
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.28247925G>A, NC_000017.10:g.26574951G>A, XR_934641.2:n.1142C>T, XR_934641.1:n.1151C>T, NR_002181.1:n.482G>A, NM_021092.1:c.*416G>A

Select item 14618238046.

rs1461823804 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 17:28247920 (GRCh38)
17:26574946 (GRCh37)
Canonical SPDI:: NC_000017.11:28247919:G:T
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.28247920G>T, NC_000017.10:g.26574946G>T, XR_934641.2:n.1147C>A, XR_934641.1:n.1156C>A, NR_002181.1:n.477G>T, NM_021092.1:c.*411G>T

Select item 14597533057.

rs1459753305 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:28247637 (GRCh38)
17:26574663 (GRCh37)
Canonical SPDI:: NC_000017.11:28247636:A:G
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000017.11:g.28247637A>G, NC_000017.10:g.26574663A>G, XR_934641.2:n.1430T>C, XR_934641.1:n.1439T>C, NR_002181.1:n.194A>G, NM_021092.1:c.*128A>G

Select item 14594069218.

rs1459406921 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:28247714 (GRCh38)
17:26574740 (GRCh37)
Canonical SPDI:: NC_000017.11:28247713:C:T
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000017.11:g.28247714C>T, NC_000017.10:g.26574740C>T, XR_934641.2:n.1353G>A, XR_934641.1:n.1362G>A, NR_002181.1:n.271C>T, NM_021092.1:c.*205C>T

Select item 14506351619.

rs1450635161 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:28247904 (GRCh38)
17:26574930 (GRCh37)
Canonical SPDI:: NC_000017.11:28247903:C:T
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000017.11:g.28247904C>T, NC_000017.10:g.26574930C>T, XR_934641.2:n.1163G>A, XR_934641.1:n.1172G>A, NR_002181.1:n.461C>T, NM_021092.1:c.*395C>T

Select item 144865949710.

rs1448659497 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:28248266 (GRCh38)
17:26575292 (GRCh37)
Canonical SPDI:: NC_000017.11:28248265:C:T
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000017.11:g.28248266C>T, NC_000017.10:g.26575292C>T, XR_934641.2:n.801G>A, XR_934641.1:n.810G>A, NR_002181.1:n.634C>T, NM_021092.1:c.*568C>T

Select item 144819828811.

rs1448198288 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:28247945 (GRCh38)
17:26574971 (GRCh37)
Canonical SPDI:: NC_000017.11:28247944:C:T
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000017.11:g.28247945C>T, NC_000017.10:g.26574971C>T, XR_934641.2:n.1122G>A, XR_934641.1:n.1131G>A, NR_002181.1:n.502C>T, NM_021092.1:c.*436C>T

Select item 144728711912.

rs1447287119 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 17:28247754 (GRCh38)
17:26574780 (GRCh37)
Canonical SPDI:: NC_000017.11:28247753:C:G,NC_000017.11:28247753:C:T
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.28247754C>G, NC_000017.11:g.28247754C>T, NC_000017.10:g.26574780C>G, NC_000017.10:g.26574780C>T, XR_934641.2:n.1313G>C, XR_934641.2:n.1313G>A, XR_934641.1:n.1322G>C, XR_934641.1:n.1322G>A, NR_002181.1:n.311C>G, NR_002181.1:n.311C>T, NM_021092.1:c.*245C>G, NM_021092.1:c.*245C>T

Select item 144671381613.

rs1446713816 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:28247453 (GRCh38)
17:26574479 (GRCh37)
Canonical SPDI:: NC_000017.11:28247452:G:A
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000029/4 (GnomAD)
A=0.000034/9 (TOPMED)
A=0.000035/1 (TOMMO)
HGVS:: NC_000017.11:g.28247453G>A, NC_000017.10:g.26574479G>A, XR_934641.2:n.1614C>T, XR_934641.1:n.1623C>T, NR_002181.1:n.10G>A, NM_021092.1:c.10G>A

Select item 144612769614.

rs1446127696 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:28247827 (GRCh38)
17:26574853 (GRCh37)
Canonical SPDI:: NC_000017.11:28247826:C:T
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000017.11:g.28247827C>T, NC_000017.10:g.26574853C>T, XR_934641.2:n.1240G>A, XR_934641.1:n.1249G>A, NR_002181.1:n.384C>T, NM_021092.1:c.*318C>T

Select item 144004173115.

rs1440041731 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:28247906 (GRCh38)
17:26574932 (GRCh37)
Canonical SPDI:: NC_000017.11:28247905:C:T
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.000602/10 (TOMMO)
HGVS:: NC_000017.11:g.28247906C>T, NC_000017.10:g.26574932C>T, XR_934641.2:n.1161G>A, XR_934641.1:n.1170G>A, NR_002181.1:n.463C>T, NM_021092.1:c.*397C>T

Select item 143865610516.

rs1438656105 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:28247594 (GRCh38)
17:26574620 (GRCh37)
Canonical SPDI:: NC_000017.11:28247593:G:A
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000017.11:g.28247594G>A, NC_000017.10:g.26574620G>A, XR_934641.2:n.1473C>T, XR_934641.1:n.1482C>T, NR_002181.1:n.151G>A, NM_021092.1:c.*85G>A

Select item 143677535117.

rs1436775351 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 17:28248278 (GRCh38)
17:26575304 (GRCh37)
Canonical SPDI:: NC_000017.11:28248277:A:G
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.28248278A>G, NC_000017.10:g.26575304A>G, XR_934641.2:n.789T>C, XR_934641.1:n.798T>C, NR_002181.1:n.646A>G, NM_021092.1:c.*580A>G

Select item 143621870318.

rs1436218703 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:28247544 (GRCh38)
17:26574570 (GRCh37)
Canonical SPDI:: NC_000017.11:28247543:C:T
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
HGVS:: NC_000017.11:g.28247544C>T, NC_000017.10:g.26574570C>T, XR_934641.2:n.1523G>A, XR_934641.1:n.1532G>A, NR_002181.1:n.101C>T, NM_021092.1:c.*35C>T

Select item 143073988919.

rs1430739889 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:28247698 (GRCh38)
17:26574724 (GRCh37)
Canonical SPDI:: NC_000017.11:28247697:T:C
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.28247698T>C, NC_000017.10:g.26574724T>C, XR_934641.2:n.1369A>G, XR_934641.1:n.1378A>G, NR_002181.1:n.255T>C, NM_021092.1:c.*189T>C

Select item 142542266320.

rs1425422663 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 17:28247778 (GRCh38)
17:26574804 (GRCh37)
Canonical SPDI:: NC_000017.11:28247777:G:C,NC_000017.11:28247777:G:T
Gene:: PPY2P (Varview), LOC105371712 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000022/3 (GnomAD_exomes)
HGVS:: NC_000017.11:g.28247778G>C, NC_000017.11:g.28247778G>T, NC_000017.10:g.26574804G>C, NC_000017.10:g.26574804G>T, XR_934641.2:n.1289C>G, XR_934641.2:n.1289C>A, XR_934641.1:n.1298C>G, XR_934641.1:n.1298C>A, NR_002181.1:n.335G>C, NR_002181.1:n.335G>T, NM_021092.1:c.*269G>C, NM_021092.1:c.*269G>T

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