SNP Links for Nucleotide (Select 563320135) - SNP

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Links from Nucleotide

Items: 1 to 20 of 32

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Select item 14777460731.

rs1477746073 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 2:217900600 (GRCh38)
2:218765323 (GRCh37)
Canonical SPDI:: NC_000002.12:217900599:C:G,NC_000002.12:217900599:C:T
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
G=0.000008/1 (GnomAD_exomes)
HGVS:: NC_000002.12:g.217900600C>G, NC_000002.12:g.217900600C>T, NC_000002.11:g.218765323C>G, NC_000002.11:g.218765323C>T, NR_106867.1:n.29G>C, NR_106867.1:n.29G>A

Select item 14396053242.

rs1439605324 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 2:217900548 (GRCh38)
2:218765271 (GRCh37)
Canonical SPDI:: NC_000002.12:217900547:G:A,NC_000002.12:217900547:G:T
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.217900548G>A, NC_000002.12:g.217900548G>T, NC_000002.11:g.218765271G>A, NC_000002.11:g.218765271G>T, NR_106867.1:n.81C>T, NR_106867.1:n.81C>A

Select item 14364158973.

rs1436415897 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:217900537 (GRCh38)
2:218765260 (GRCh37)
Canonical SPDI:: NC_000002.12:217900536:C:T
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.217900537C>T, NC_000002.11:g.218765260C>T, NR_106867.1:n.92G>A

Select item 13733285974.

rs1373328597 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:217900534 (GRCh38)
2:218765257 (GRCh37)
Canonical SPDI:: NC_000002.12:217900533:C:T
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency
MAF:: T=0.000015/2 (GnomAD_exomes)
HGVS:: NC_000002.12:g.217900534C>T, NC_000002.11:g.218765257C>T, NR_106867.1:n.95G>A

Select item 13504988295.

rs1350498829 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 2:217900574 (GRCh38)
2:218765297 (GRCh37)
Canonical SPDI:: NC_000002.12:217900573:A:C,NC_000002.12:217900573:A:G
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: G=0.000007/1 (GnomAD_exomes)
C=0.000035/1 (TOMMO)
G=0.000342/1 (KOREAN)
HGVS:: NC_000002.12:g.217900574A>C, NC_000002.12:g.217900574A>G, NC_000002.11:g.218765297A>C, NC_000002.11:g.218765297A>G, NR_106867.1:n.55T>G, NR_106867.1:n.55T>C

Select item 13481175776.

rs1348117577 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 2:217900570 (GRCh38)
2:218765293 (GRCh37)
Canonical SPDI:: NC_000002.12:217900569:G:A,NC_000002.12:217900569:G:T
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.217900570G>A, NC_000002.12:g.217900570G>T, NC_000002.11:g.218765293G>A, NC_000002.11:g.218765293G>T, NR_106867.1:n.59C>T, NR_106867.1:n.59C>A

Select item 13452757947.

rs1345275794 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 2:217900524 (GRCh38)
2:218765247 (GRCh37)
Canonical SPDI:: NC_000002.12:217900523:A:C
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
HGVS:: NC_000002.12:g.217900524A>C, NC_000002.11:g.218765247A>C, NR_106867.1:n.105T>G

Select item 13401972758.

rs1340197275 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 2:217900582 (GRCh38)
2:218765305 (GRCh37)
Canonical SPDI:: NC_000002.12:217900581:G:C
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.217900582G>C, NC_000002.11:g.218765305G>C, NR_106867.1:n.47C>G

Select item 13205699149.

rs1320569914 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:217900601 (GRCh38)
2:218765324 (GRCh37)
Canonical SPDI:: NC_000002.12:217900600:A:G
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000002.12:g.217900601A>G, NC_000002.11:g.218765324A>G, NR_106867.1:n.28T>C

Select item 131310274310.

rs1313102743 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 2:217900542 (GRCh38)
2:218765265 (GRCh37)
Canonical SPDI:: NC_000002.12:217900541:T:C,NC_000002.12:217900541:T:G
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000043/1 (ALFA)
C=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000002.12:g.217900542T>C, NC_000002.12:g.217900542T>G, NC_000002.11:g.218765265T>C, NC_000002.11:g.218765265T>G, NR_106867.1:n.87A>G, NR_106867.1:n.87A>C

Select item 131261757111.

rs1312617571 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:217900525 (GRCh38)
2:218765248 (GRCh37)
Canonical SPDI:: NC_000002.12:217900524:G:A
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.217900525G>A, NC_000002.11:g.218765248G>A, NR_106867.1:n.104C>T

Select item 129989344712.

rs1299893447 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:217900572 (GRCh38)
2:218765295 (GRCh37)
Canonical SPDI:: NC_000002.12:217900571:A:G
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000002.12:g.217900572A>G, NC_000002.11:g.218765295A>G, NR_106867.1:n.57T>C

Select item 126541236613.

rs1265412366 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:217900599 (GRCh38)
2:218765322 (GRCh37)
Canonical SPDI:: NC_000002.12:217900598:A:G
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.217900599A>G, NC_000002.11:g.218765322A>G, NR_106867.1:n.30T>C

Select item 121209710214.

rs1212097102 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 2:217900575 (GRCh38)
2:218765298 (GRCh37)
Canonical SPDI:: NC_000002.12:217900574:C:A,NC_000002.12:217900574:C:T
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
A=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000002.12:g.217900575C>A, NC_000002.12:g.217900575C>T, NC_000002.11:g.218765298C>A, NC_000002.11:g.218765298C>T, NR_106867.1:n.54G>T, NR_106867.1:n.54G>A

Select item 120585925315.

rs1205859253 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAT>- [Show Flanks]
Chromosome:: 2:217900603 (GRCh38)
2:218765326 (GRCh37)
Canonical SPDI:: NC_000002.12:217900600:ATGAT:AT
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.217900603_217900605del, NC_000002.11:g.218765326_218765328del, NR_106867.1:n.26_28del

Select item 119334529916.

rs1193345299 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:217900592 (GRCh38)
2:218765315 (GRCh37)
Canonical SPDI:: NC_000002.12:217900591:G:A
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.217900592G>A, NC_000002.11:g.218765315G>A, NR_106867.1:n.37C>T

Select item 119053670817.

rs1190536708 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:217900602 (GRCh38)
2:218765325 (GRCh37)
Canonical SPDI:: NC_000002.12:217900601:T:C
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by cluster
MAF:: C=0.000008/1 (GnomAD_exomes)
HGVS:: NC_000002.12:g.217900602T>C, NC_000002.11:g.218765325T>C, NR_106867.1:n.27A>G

Select item 117527140118.

rs1175271401 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:217900515 (GRCh38)
2:218765238 (GRCh37)
Canonical SPDI:: NC_000002.12:217900514:G:A
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: A=0.000015/2 (GnomAD_exomes)
HGVS:: NC_000002.12:g.217900515G>A, NC_000002.11:g.218765238G>A, NR_106867.1:n.114C>T

Select item 103233723619.

rs1032337236 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 2:217900553 (GRCh38)
2:218765276 (GRCh37)
Canonical SPDI:: NC_000002.12:217900552:G:C
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.217900553G>C, NC_000002.11:g.218765276G>C, NR_106867.1:n.76C>G

Select item 100957076320.

rs1009570763 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 2:217900589 (GRCh38)
2:218765312 (GRCh37)
Canonical SPDI:: NC_000002.12:217900588:A:G,NC_000002.12:217900588:A:T
Gene:: TNS1 (Varview), MIR6809 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00007/1 (ALFA)
HGVS:: NC_000002.12:g.217900589A>G, NC_000002.12:g.217900589A>T, NC_000002.11:g.218765312A>G, NC_000002.11:g.218765312A>T, NR_106867.1:n.40T>C, NR_106867.1:n.40T>A