SNP Links for Nucleotide (Select 563320489) - SNP

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Links from Nucleotide

Items: 1 to 20 of 33

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Select item 14843785551.

rs1484378555 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:100356702 (GRCh38)
7:99954325 (GRCh37)
Canonical SPDI:: NC_000007.14:100356701:G:A
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
HGVS:: NC_000007.14:g.100356702G>A, NC_000007.13:g.99954325G>A, NM_175047.1:c.102G>A, NR_106899.1:n.52G>A

Select item 14765097652.

rs1476509765 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 7:100356657 (GRCh38)
7:99954280 (GRCh37)
Canonical SPDI:: NC_000007.14:100356656:C:A
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.100356657C>A, NC_000007.13:g.99954280C>A, NM_175047.1:c.57C>A, NR_106899.1:n.7C>A

Select item 14691663713.

rs1469166371 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:100356718 (GRCh38)
7:99954341 (GRCh37)
Canonical SPDI:: NC_000007.14:100356717:C:T
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000051/1 (ALFA)
T=0.000007/1 (GnomAD_exomes)
T=0.000342/1 (KOREAN)
HGVS:: NC_000007.14:g.100356718C>T, NC_000007.13:g.99954341C>T, NM_175047.1:c.118C>T, NR_106899.1:n.68C>T

Select item 14542911214.

rs1454291121 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:100356659 (GRCh38)
7:99954282 (GRCh37)
Canonical SPDI:: NC_000007.14:100356658:C:T
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.100356659C>T, NC_000007.13:g.99954282C>T, NM_175047.1:c.59C>T, NR_106899.1:n.9C>T

Select item 14271243595.

rs1427124359 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:100356715 (GRCh38)
7:99954338 (GRCh37)
Canonical SPDI:: NC_000007.14:100356714:G:A
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant,intron_variant
HGVS:: NC_000007.14:g.100356715G>A, NC_000007.13:g.99954338G>A, NM_175047.1:c.115G>A, NR_106899.1:n.65G>A

Select item 13632620636.

rs1363262063 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:100356658 (GRCh38)
7:99954281 (GRCh37)
Canonical SPDI:: NC_000007.14:100356657:C:T
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
T=0.000044/6 (GnomAD_exomes)
HGVS:: NC_000007.14:g.100356658C>T, NC_000007.13:g.99954281C>T, NM_175047.1:c.58C>T, NR_106899.1:n.8C>T

Select item 13370800337.

rs1337080033 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:100356671 (GRCh38)
7:99954294 (GRCh37)
Canonical SPDI:: NC_000007.14:100356670:C:T
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency
MAF:: T=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000007.14:g.100356671C>T, NC_000007.13:g.99954294C>T, NM_175047.1:c.71C>T, NR_106899.1:n.21C>T

Select item 13169655148.

rs1316965514 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 7:100356683 (GRCh38)
7:99954306 (GRCh37)
Canonical SPDI:: NC_000007.14:100356682:CT:
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.000111/1 (ALFA)
-=0.000014/2 (GnomAD_exomes)
HGVS:: NC_000007.14:g.100356683_100356684del, NC_000007.13:g.99954306_99954307del, NM_175047.1:c.83_84del, NR_106899.1:n.33_34del

Select item 13154228889.

rs1315422888 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 7:100356708 (GRCh38)
7:99954331 (GRCh37)
Canonical SPDI:: NC_000007.14:100356707:G:T
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000007.14:g.100356708G>T, NC_000007.13:g.99954331G>T, NM_175047.1:c.108G>T, NR_106899.1:n.58G>T

Select item 130570444110.

rs1305704441 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 7:100356681 (GRCh38)
7:99954304 (GRCh37)
Canonical SPDI:: NC_000007.14:100356680:C:A,NC_000007.14:100356680:C:T
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000007.14:g.100356681C>A, NC_000007.14:g.100356681C>T, NC_000007.13:g.99954304C>A, NC_000007.13:g.99954304C>T, NM_175047.1:c.81C>A, NM_175047.1:c.81C>T, NR_106899.1:n.31C>A, NR_106899.1:n.31C>T

Select item 128241711311.

rs1282417113 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:100356675 (GRCh38)
7:99954298 (GRCh37)
Canonical SPDI:: NC_000007.14:100356674:C:T
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.100356675C>T, NC_000007.13:g.99954298C>T, NM_175047.1:c.75C>T, NR_106899.1:n.25C>T

Select item 127776164012.

rs1277761640 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 7:100356698 (GRCh38)
7:99954321 (GRCh37)
Canonical SPDI:: NC_000007.14:100356697:C:A,NC_000007.14:100356697:C:T
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
A=0.000035/1 (TOMMO)
HGVS:: NC_000007.14:g.100356698C>A, NC_000007.14:g.100356698C>T, NC_000007.13:g.99954321C>A, NC_000007.13:g.99954321C>T, NM_175047.1:c.98C>A, NM_175047.1:c.98C>T, NR_106899.1:n.48C>A, NR_106899.1:n.48C>T

Select item 121602464213.

rs1216024642 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 7:100356687 (GRCh38)
7:99954311 (GRCh37)
Canonical SPDI:: NC_000007.14:100356687:A:AA
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: AA=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.100356688dup, NC_000007.13:g.99954311dup, NM_175047.1:c.88dup, NR_106899.1:n.38dup

Select item 120857797314.

rs1208577973 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 7:100356678 (GRCh38)
7:99954302 (GRCh37)
Canonical SPDI:: NC_000007.14:100356678:T:TT
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
HGVS:: NC_000007.14:g.100356679dup, NC_000007.13:g.99954302dup, NM_175047.1:c.79dup, NR_106899.1:n.29dup

Select item 118736862715.

rs1187368627 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:100356655 (GRCh38)
7:99954278 (GRCh37)
Canonical SPDI:: NC_000007.14:100356654:C:T
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000007.14:g.100356655C>T, NC_000007.13:g.99954278C>T, NM_175047.1:c.55C>T, NR_106899.1:n.5C>T

Select item 117567692716.

rs1175676927 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:100356703 (GRCh38)
7:99954326 (GRCh37)
Canonical SPDI:: NC_000007.14:100356702:A:G
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000007/1 (GnomAD_exomes)
G=0.000011/3 (TOPMED)
HGVS:: NC_000007.14:g.100356703A>G, NC_000007.13:g.99954326A>G, NM_175047.1:c.103A>G, NR_106899.1:n.53A>G

Select item 117154675917.

rs1171546759 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:100356714 (GRCh38)
7:99954337 (GRCh37)
Canonical SPDI:: NC_000007.14:100356713:G:A
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.100356714G>A, NC_000007.13:g.99954337G>A, NM_175047.1:c.114G>A, NR_106899.1:n.64G>A

Select item 116127562418.

rs1161275624 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 7:100356713 (GRCh38)
7:99954336 (GRCh37)
Canonical SPDI:: NC_000007.14:100356712:G:A
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
HGVS:: NC_000007.14:g.100356713G>A, NC_000007.13:g.99954336G>A, NM_175047.1:c.113G>A, NR_106899.1:n.63G>A

Select item 105481027919.

rs1054810279 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:100356711 (GRCh38)
7:99954334 (GRCh37)
Canonical SPDI:: NC_000007.14:100356710:C:T
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.00002/3 (GnomAD_exomes)
T=0.000045/12 (TOPMED)
T=0.000078/11 (GnomAD)
HGVS:: NC_000007.14:g.100356711C>T, NC_000007.13:g.99954334C>T, NM_175047.1:c.111C>T, NR_106899.1:n.61C>T

Select item 104054140520.

rs1040541405 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 7:100356661 (GRCh38)
7:99954284 (GRCh37)
Canonical SPDI:: NC_000007.14:100356660:C:A,NC_000007.14:100356660:C:T
Gene:: PILRB (Varview), STAG3L5P-PVRIG2P-PILRB (Varview), MIR6840 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD_exomes)
T=0.000023/6 (TOPMED)
T=0.000177/3 (TOMMO)
HGVS:: NC_000007.14:g.100356661C>A, NC_000007.14:g.100356661C>T, NC_000007.13:g.99954284C>A, NC_000007.13:g.99954284C>T, NM_175047.1:c.61C>A, NM_175047.1:c.61C>T, NR_106899.1:n.11C>A, NR_106899.1:n.11C>T