SNP Links for Nucleotide (Select 569026735) - SNP

Links from Nucleotide

Items: 1 to 20 of 165

<< First< Prev

Page of 9

Next >Last >>

Select item 14900301211.

rs1490030121 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:27394495 (GRCh38)
12:27547428 (GRCh37)
Canonical SPDI:: NC_000012.12:27394494:T:C
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000023/6 (TOPMED)
HGVS:: NC_000012.12:g.27394495T>C, NC_000012.11:g.27547428T>C, NG_030359.2:g.66642T>C, NR_109975.1:n.267A>G

Select item 14890631342.

rs1489063134 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 12:27394503 (GRCh38)
12:27547436 (GRCh37)
Canonical SPDI:: NC_000012.12:27394502:G:A,NC_000012.12:27394502:G:T
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000035/1 (TOMMO)
HGVS:: NC_000012.12:g.27394503G>A, NC_000012.12:g.27394503G>T, NC_000012.11:g.27547436G>A, NC_000012.11:g.27547436G>T, NG_030359.2:g.66650G>A, NG_030359.2:g.66650G>T, NR_109975.1:n.259C>T, NR_109975.1:n.259C>A

Select item 14790120503.

rs1479012050 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:27389824 (GRCh38)
12:27542757 (GRCh37)
Canonical SPDI:: NC_000012.12:27389823:T:C
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.27389824T>C, NC_000012.11:g.27542757T>C, NG_030359.2:g.61971T>C, NR_109975.1:n.778A>G

Select item 14780953124.

rs1478095312 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 12:27390156 (GRCh38)
12:27543089 (GRCh37)
Canonical SPDI:: NC_000012.12:27390155:G:C
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000012.12:g.27390156G>C, NC_000012.11:g.27543089G>C, NG_030359.2:g.62303G>C, NM_020183.6:c.836G>C, NM_020183.5:c.836G>C, NM_020183.4:c.836G>C, NM_001248002.3:c.794G>C, NM_001248002.2:c.794G>C, NM_001248002.1:c.794G>C, NM_001248003.3:c.725G>C, NM_001248003.2:c.725G>C, NM_001248003.1:c.725G>C, NM_001248004.3:c.692G>C, NM_001248004.2:c.692G>C, NM_001248004.1:c.692G>C, NM_001248005.3:c.725G>C, NM_001248005.2:c.725G>C, NM_001248005.1:c.725G>C, NM_001394524.1:c.869G>C, NM_001394525.1:c.827G>C, NM_001394526.1:c.734G>C, NM_001394527.1:c.692G>C, NM_001394528.1:c.632G>C, NM_001394529.1:c.599G>C, XM_011520768.3:c.776G>C, XM_011520768.2:c.776G>C, XM_011520768.1:c.776G>C, XM_011520769.3:c.767G>C, XM_011520769.2:c.767G>C, XM_011520769.1:c.767G>C, XM_006719114.3:c.470G>C, XM_006719114.2:c.470G>C, XM_006719114.1:c.470G>C, XM_047429171.1:c.743G>C, XM_047429172.1:c.701G>C, XM_047429173.1:c.674G>C, XM_017019668.1:c.530G>C, XM_047429174.1:c.437G>C, XM_017019669.1:c.524G>C, NR_109975.1:n.446C>G, NP_064568.3:p.Arg279Thr, NP_001234931.1:p.Arg265Thr, NP_001234932.1:p.Arg242Thr, NP_001234933.1:p.Arg231Thr, NP_001234934.1:p.Arg242Thr, NP_001381453.1:p.Arg290Thr, NP_001381454.1:p.Arg276Thr, NP_001381455.1:p.Arg245Thr, NP_001381456.1:p.Arg231Thr, NP_001381457.1:p.Arg211Thr, NP_001381458.1:p.Arg200Thr, XP_011519070.1:p.Arg259Thr, XP_011519071.1:p.Arg256Thr, XP_006719177.1:p.Arg157Thr, XP_047285127.1:p.Arg248Thr, XP_047285128.1:p.Arg234Thr, XP_047285129.1:p.Arg225Thr, XP_016875157.1:p.Arg177Thr, XP_047285130.1:p.Arg146Thr, XP_016875158.1:p.Arg175Thr

Select item 14744486865.

rs1474448686 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:27389832 (GRCh38)
12:27542765 (GRCh37)
Canonical SPDI:: NC_000012.12:27389831:A:G
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000142/2 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000026/7 (TOPMED)
HGVS:: NC_000012.12:g.27389832A>G, NC_000012.11:g.27542765A>G, NG_030359.2:g.61979A>G, NR_109975.1:n.770T>C

Select item 14742140816.

rs1474214081 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:27394474 (GRCh38)
12:27547407 (GRCh37)
Canonical SPDI:: NC_000012.12:27394473:A:G
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.27394474A>G, NC_000012.11:g.27547407A>G, NG_030359.2:g.66621A>G, NR_109975.1:n.288T>C

Select item 14741758027.

rs1474175802 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 12:27390098 (GRCh38)
12:27543031 (GRCh37)
Canonical SPDI:: NC_000012.12:27390097:G:A,NC_000012.12:27390097:G:T
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.27390098G>A, NC_000012.12:g.27390098G>T, NC_000012.11:g.27543031G>A, NC_000012.11:g.27543031G>T, NG_030359.2:g.62245G>A, NG_030359.2:g.62245G>T, NM_020183.6:c.778G>A, NM_020183.6:c.778G>T, NM_020183.5:c.778G>A, NM_020183.5:c.778G>T, NM_020183.4:c.778G>A, NM_020183.4:c.778G>T, NM_001248002.3:c.736G>A, NM_001248002.3:c.736G>T, NM_001248002.2:c.736G>A, NM_001248002.2:c.736G>T, NM_001248002.1:c.736G>A, NM_001248002.1:c.736G>T, NM_001248003.3:c.667G>A, NM_001248003.3:c.667G>T, NM_001248003.2:c.667G>A, NM_001248003.2:c.667G>T, NM_001248003.1:c.667G>A, NM_001248003.1:c.667G>T, NM_001248004.3:c.634G>A, NM_001248004.3:c.634G>T, NM_001248004.2:c.634G>A, NM_001248004.2:c.634G>T, NM_001248004.1:c.634G>A, NM_001248004.1:c.634G>T, NM_001248005.3:c.667G>A, NM_001248005.3:c.667G>T, NM_001248005.2:c.667G>A, NM_001248005.2:c.667G>T, NM_001248005.1:c.667G>A, NM_001248005.1:c.667G>T, NM_001394524.1:c.811G>A, NM_001394524.1:c.811G>T, NM_001394525.1:c.769G>A, NM_001394525.1:c.769G>T, NM_001394526.1:c.676G>A, NM_001394526.1:c.676G>T, NM_001394527.1:c.634G>A, NM_001394527.1:c.634G>T, NM_001394528.1:c.574G>A, NM_001394528.1:c.574G>T, NM_001394529.1:c.541G>A, NM_001394529.1:c.541G>T, XM_011520768.3:c.718G>A, XM_011520768.3:c.718G>T, XM_011520768.2:c.718G>A, XM_011520768.2:c.718G>T, XM_011520768.1:c.718G>A, XM_011520768.1:c.718G>T, XM_011520769.3:c.709G>A, XM_011520769.3:c.709G>T, XM_011520769.2:c.709G>A, XM_011520769.2:c.709G>T, XM_011520769.1:c.709G>A, XM_011520769.1:c.709G>T, XM_006719114.3:c.412G>A, XM_006719114.3:c.412G>T, XM_006719114.2:c.412G>A, XM_006719114.2:c.412G>T, XM_006719114.1:c.412G>A, XM_006719114.1:c.412G>T, XM_047429171.1:c.685G>A, XM_047429171.1:c.685G>T, XM_047429172.1:c.643G>A, XM_047429172.1:c.643G>T, XM_047429173.1:c.616G>A, XM_047429173.1:c.616G>T, XM_017019668.1:c.472G>A, XM_017019668.1:c.472G>T, XM_047429174.1:c.379G>A, XM_047429174.1:c.379G>T, XM_017019669.1:c.466G>A, XM_017019669.1:c.466G>T, NR_109975.1:n.504C>T, NR_109975.1:n.504C>A, NP_064568.3:p.Gly260Ser, NP_064568.3:p.Gly260Cys, NP_001234931.1:p.Gly246Ser, NP_001234931.1:p.Gly246Cys, NP_001234932.1:p.Gly223Ser, NP_001234932.1:p.Gly223Cys, NP_001234933.1:p.Gly212Ser, NP_001234933.1:p.Gly212Cys, NP_001234934.1:p.Gly223Ser, NP_001234934.1:p.Gly223Cys, NP_001381453.1:p.Gly271Ser, NP_001381453.1:p.Gly271Cys, NP_001381454.1:p.Gly257Ser, NP_001381454.1:p.Gly257Cys, NP_001381455.1:p.Gly226Ser, NP_001381455.1:p.Gly226Cys, NP_001381456.1:p.Gly212Ser, NP_001381456.1:p.Gly212Cys, NP_001381457.1:p.Gly192Ser, NP_001381457.1:p.Gly192Cys, NP_001381458.1:p.Gly181Ser, NP_001381458.1:p.Gly181Cys, XP_011519070.1:p.Gly240Ser, XP_011519070.1:p.Gly240Cys, XP_011519071.1:p.Gly237Ser, XP_011519071.1:p.Gly237Cys, XP_006719177.1:p.Gly138Ser, XP_006719177.1:p.Gly138Cys, XP_047285127.1:p.Gly229Ser, XP_047285127.1:p.Gly229Cys, XP_047285128.1:p.Gly215Ser, XP_047285128.1:p.Gly215Cys, XP_047285129.1:p.Gly206Ser, XP_047285129.1:p.Gly206Cys, XP_016875157.1:p.Gly158Ser, XP_016875157.1:p.Gly158Cys, XP_047285130.1:p.Gly127Ser, XP_047285130.1:p.Gly127Cys, XP_016875158.1:p.Gly156Ser, XP_016875158.1:p.Gly156Cys

Select item 14701768298.

rs1470176829 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:27390408 (GRCh38)
12:27543341 (GRCh37)
Canonical SPDI:: NC_000012.12:27390407:A:G
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000012.12:g.27390408A>G, NC_000012.11:g.27543341A>G, NG_030359.2:g.62555A>G, NR_109975.1:n.420T>C

Select item 14697513919.

rs1469751391 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:27389885 (GRCh38)
12:27542818 (GRCh37)
Canonical SPDI:: NC_000012.12:27389884:A:G
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000043/6 (GnomAD)
G=0.000087/23 (TOPMED)
HGVS:: NC_000012.12:g.27389885A>G, NC_000012.11:g.27542818A>G, NG_030359.2:g.62032A>G, NR_109975.1:n.717T>C

Select item 146750221410.

rs1467502214 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 12:27389926 (GRCh38)
12:27542859 (GRCh37)
Canonical SPDI:: NC_000012.12:27389925:C:A
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.27389926C>A, NC_000012.11:g.27542859C>A, NG_030359.2:g.62073C>A, NR_109975.1:n.676G>T

Select item 146510699311.

rs1465106993 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:27390013 (GRCh38)
12:27542946 (GRCh37)
Canonical SPDI:: NC_000012.12:27390012:T:C
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000012.12:g.27390013T>C, NC_000012.11:g.27542946T>C, NG_030359.2:g.62160T>C, NR_109975.1:n.589A>G

Select item 146280489812.

rs1462804898 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 12:27390065 (GRCh38)
12:27542998 (GRCh37)
Canonical SPDI:: NC_000012.12:27390064:A:T
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000012.12:g.27390065A>T, NC_000012.11:g.27542998A>T, NG_030359.2:g.62212A>T, NR_109975.1:n.537T>A

Select item 145603583313.

rs1456035833 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:27389831 (GRCh38)
12:27542764 (GRCh37)
Canonical SPDI:: NC_000012.12:27389830:C:T
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000054/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
T=0.000223/1 (Estonian)
HGVS:: NC_000012.12:g.27389831C>T, NC_000012.11:g.27542764C>T, NG_030359.2:g.61978C>T, NR_109975.1:n.771G>A

Select item 145510477914.

rs1455104779 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:27446520 (GRCh38)
12:27599453 (GRCh37)
Canonical SPDI:: NC_000012.12:27446519:C:T
Gene:: SMCO2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.27446520C>T, NC_000012.11:g.27599453C>T, NR_109975.1:n.115G>A

Select item 145443918815.

rs1454439188 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 12:27446546 (GRCh38)
12:27599479 (GRCh37)
Canonical SPDI:: NC_000012.12:27446545:C:G,NC_000012.12:27446545:C:T
Gene:: SMCO2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000012.12:g.27446546C>G, NC_000012.12:g.27446546C>T, NC_000012.11:g.27599479C>G, NC_000012.11:g.27599479C>T, NR_109975.1:n.89G>C, NR_109975.1:n.89G>A

Select item 145393216416.

rs1453932164 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 12:27389980 (GRCh38)
12:27542913 (GRCh37)
Canonical SPDI:: NC_000012.12:27389979:T:A
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000012.12:g.27389980T>A, NC_000012.11:g.27542913T>A, NG_030359.2:g.62127T>A, NR_109975.1:n.622A>T

Select item 144399617617.

rs1443996176 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:27394568 (GRCh38)
12:27547501 (GRCh37)
Canonical SPDI:: NC_000012.12:27394567:A:G
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000012.12:g.27394568A>G, NC_000012.11:g.27547501A>G, NG_030359.2:g.66715A>G, NR_109975.1:n.194T>C

Select item 144253034118.

rs1442530341 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:27394542 (GRCh38)
12:27547475 (GRCh37)
Canonical SPDI:: NC_000012.12:27394541:C:T
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000108/2 (ALFA)
T=0.000026/7 (TOPMED)
T=0.000036/5 (GnomAD)
T=0.000223/1 (Estonian)
HGVS:: NC_000012.12:g.27394542C>T, NC_000012.11:g.27547475C>T, NG_030359.2:g.66689C>T, NR_109975.1:n.220G>A

Select item 143158205019.

rs1431582050 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 12:27394455 (GRCh38)
12:27547389 (GRCh37)
Canonical SPDI:: NC_000012.12:27394455:C:CC
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.27394456dup, NC_000012.11:g.27547389dup, NG_030359.2:g.66603dup, NR_109975.1:n.306dup

Select item 142753944920.

rs1427539449 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 12:27389946 (GRCh38)
12:27542879 (GRCh37)
Canonical SPDI:: NC_000012.12:27389945:C:G
Gene:: ARNTL2 (Varview), ARNTL2-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.27389946C>G, NC_000012.11:g.27542879C>G, NG_030359.2:g.62093C>G, NR_109975.1:n.656G>C

<< First< Prev

Page of 9

Next >Last >>

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Nucleotide

Items: 1 to 20 of 165

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity