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Links from Nucleotide

Items: 1 to 20 of 1000

1.

rs1490746115 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    G>A,T [Show Flanks]
    Chromosome:
    10:102399642 (GRCh38)
    10:104159399 (GRCh37)
    Canonical SPDI:
    NC_000010.11:102399641:G:A,NC_000010.11:102399641:G:T
    Gene:
    NFKB2 (Varview)
    Functional Consequence:
    missense_variant,coding_sequence_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    T=0./0 (ALFA)
    T=0.000004/1 (TOPMED)
    A=0.000008/1 (GnomAD_exomes)
    HGVS:
    NC_000010.11:g.102399642G>A, NC_000010.11:g.102399642G>T, NC_000010.10:g.104159399G>A, NC_000010.10:g.104159399G>T, NG_033874.2:g.10533G>A, NG_033874.2:g.10533G>T, NM_002502.6:c.1393G>A, NM_002502.6:c.1393G>T, NM_002502.5:c.1393G>A, NM_002502.5:c.1393G>T, NM_002502.4:c.1393G>A, NM_002502.4:c.1393G>T, NM_001077494.3:c.1393G>A, NM_001077494.3:c.1393G>T, NM_001077494.2:c.1393G>A, NM_001077494.2:c.1393G>T, NM_001261403.3:c.1393G>A, NM_001261403.3:c.1393G>T, NM_001261403.2:c.1393G>A, NM_001261403.2:c.1393G>T, NM_001261403.1:c.1393G>A, NM_001261403.1:c.1393G>T, NM_001322934.2:c.1393G>A, NM_001322934.2:c.1393G>T, NM_001322934.1:c.1393G>A, NM_001322934.1:c.1393G>T, NM_001288724.1:c.1393G>A, NM_001288724.1:c.1393G>T, NM_001322935.1:c.1267G>A, NM_001322935.1:c.1267G>T, NR_048560.1:n.1956G>A, NR_048560.1:n.1956G>T, NM_001077493.1:c.1393G>A, NM_001077493.1:c.1393G>T, NP_002493.3:p.Gly465Ser, NP_002493.3:p.Gly465Cys, NP_001070962.1:p.Gly465Ser, NP_001070962.1:p.Gly465Cys, NP_001248332.1:p.Gly465Ser, NP_001248332.1:p.Gly465Cys, NP_001309863.1:p.Gly465Ser, NP_001309863.1:p.Gly465Cys, NP_001275653.1:p.Gly465Ser, NP_001275653.1:p.Gly465Cys, NP_001309864.1:p.Gly423Ser, NP_001309864.1:p.Gly423Cys
    4.

    rs1488705625 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      G>A [Show Flanks]
      Chromosome:
      10:102401869 (GRCh38)
      10:104161626 (GRCh37)
      Canonical SPDI:
      NC_000010.11:102401868:G:A
      Gene:
      NFKB2 (Varview)
      Functional Consequence:
      synonymous_variant,coding_sequence_variant
      Clinical significance:
      likely-benign
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      A=0./0 (ALFA)
      A=0.000004/1 (GnomAD_exomes)
      A=0.000004/1 (TOPMED)
      A=0.000007/1 (GnomAD)
      HGVS:
      5.

      rs1486109142 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        C>A,T [Show Flanks]
        Chromosome:
        10:102394119 (GRCh38)
        10:104153876 (GRCh37)
        Canonical SPDI:
        NC_000010.11:102394118:C:A,NC_000010.11:102394118:C:T
        Gene:
        NFKB2 (Varview)
        Functional Consequence:
        5_prime_UTR_variant,upstream_transcript_variant,genic_upstream_transcript_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        T=0./0 (ALFA)
        T=0.000007/1 (GnomAD)
        T=0.000015/4 (TOPMED)
        HGVS:
        9.

        rs1483460853 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          G>A,T [Show Flanks]
          Chromosome:
          10:102394490 (GRCh38)
          10:104154247 (GRCh37)
          Canonical SPDI:
          NC_000010.11:102394489:G:A,NC_000010.11:102394489:G:T
          Gene:
          NFKB2 (Varview)
          Functional Consequence:
          5_prime_UTR_variant,upstream_transcript_variant,genic_upstream_transcript_variant
          Validated:
          by frequency,by alfa
          MAF:
          T=0./0 (ALFA)
          A=0.000019/5 (TOPMED)
          HGVS:
          10.

          rs1482942916 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            C>G [Show Flanks]
            Chromosome:
            10:102398812 (GRCh38)
            10:104158569 (GRCh37)
            Canonical SPDI:
            NC_000010.11:102398811:C:G
            Gene:
            NFKB2 (Varview)
            Functional Consequence:
            coding_sequence_variant,intron_variant,missense_variant
            Clinical significance:
            uncertain-significance
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            G=0./0 (ALFA)
            G=0./0 (GnomAD)
            G=0.000004/1 (GnomAD_exomes)
            HGVS:
            14.

            rs1479584792 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              C>G,T [Show Flanks]
              Chromosome:
              10:102399438 (GRCh38)
              10:104159195 (GRCh37)
              Canonical SPDI:
              NC_000010.11:102399437:C:G,NC_000010.11:102399437:C:T
              Gene:
              NFKB2 (Varview)
              Functional Consequence:
              coding_sequence_variant,missense_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              G=0./0 (ALFA)
              G=0.000008/2 (TOPMED)
              HGVS:
              NC_000010.11:g.102399438C>G, NC_000010.11:g.102399438C>T, NC_000010.10:g.104159195C>G, NC_000010.10:g.104159195C>T, NG_033874.2:g.10329C>G, NG_033874.2:g.10329C>T, NM_002502.6:c.1268C>G, NM_002502.6:c.1268C>T, NM_002502.5:c.1268C>G, NM_002502.5:c.1268C>T, NM_002502.4:c.1268C>G, NM_002502.4:c.1268C>T, NM_001077494.3:c.1268C>G, NM_001077494.3:c.1268C>T, NM_001077494.2:c.1268C>G, NM_001077494.2:c.1268C>T, NM_001261403.3:c.1268C>G, NM_001261403.3:c.1268C>T, NM_001261403.2:c.1268C>G, NM_001261403.2:c.1268C>T, NM_001261403.1:c.1268C>G, NM_001261403.1:c.1268C>T, NM_001322934.2:c.1268C>G, NM_001322934.2:c.1268C>T, NM_001322934.1:c.1268C>G, NM_001322934.1:c.1268C>T, NM_001288724.1:c.1268C>G, NM_001288724.1:c.1268C>T, NM_001322935.1:c.1142C>G, NM_001322935.1:c.1142C>T, NR_048560.1:n.1831C>G, NR_048560.1:n.1831C>T, NM_001077493.1:c.1268C>G, NM_001077493.1:c.1268C>T, NP_002493.3:p.Pro423Arg, NP_002493.3:p.Pro423Leu, NP_001070962.1:p.Pro423Arg, NP_001070962.1:p.Pro423Leu, NP_001248332.1:p.Pro423Arg, NP_001248332.1:p.Pro423Leu, NP_001309863.1:p.Pro423Arg, NP_001309863.1:p.Pro423Leu, NP_001275653.1:p.Pro423Arg, NP_001275653.1:p.Pro423Leu, NP_001309864.1:p.Pro381Arg, NP_001309864.1:p.Pro381Leu
              15.

              rs1478950154 [Homo sapiens]
                Variant type:
                DELINS
                Alleles:
                ->G [Show Flanks]
                Chromosome:
                10:102394486 (GRCh38)
                10:104154244 (GRCh37)
                Canonical SPDI:
                NC_000010.11:102394486:GGGGGG:GGGGGGG
                Gene:
                NFKB2 (Varview)
                Functional Consequence:
                5_prime_UTR_variant,upstream_transcript_variant,genic_upstream_transcript_variant
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                GGGGGGG=0./0 (ALFA)
                G=0.000023/6 (TOPMED)
                G=0.000029/4 (GnomAD)
                G=0.000548/1 (Korea1K)
                HGVS:
                19.

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