SNP Links for Nucleotide (Select 570359617) - SNP

Links from Nucleotide

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Select item 14841830781.

rs1484183078 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 14:73787493 (GRCh38)
14:74254196 (GRCh37)
Canonical SPDI:: NC_000014.9:73787492:C:A,NC_000014.9:73787492:C:G
Gene:: MIDEAS (Varview), MIDEAS-AS1 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.73787493C>A, NC_000014.9:g.73787493C>G, NC_000014.8:g.74254196C>A, NC_000014.8:g.74254196C>G, NR_109995.1:n.134C>A, NR_109995.1:n.134C>G

Select item 14806167582.

rs1480616758 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 14:73803447 (GRCh38)
14:74270150 (GRCh37)
Canonical SPDI:: NC_000014.9:73803446:C:G,NC_000014.9:73803446:C:T
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
T=0.000248/4 (TOMMO)
HGVS:: NC_000014.9:g.73803447C>G, NC_000014.9:g.73803447C>T, NC_000014.8:g.74270150C>G, NC_000014.8:g.74270150C>T, NR_109995.1:n.803C>G, NR_109995.1:n.803C>T

Select item 14744408103.

rs1474440810 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 14:73803086 (GRCh38)
14:74269789 (GRCh37)
Canonical SPDI:: NC_000014.9:73803085:A:G
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
G=0.000029/4 (GnomAD)
G=0.000342/1 (KOREAN)
G=0.004762/1 (Vietnamese)
HGVS:: NC_000014.9:g.73803086A>G, NC_000014.8:g.74269789A>G, NR_109995.1:n.442A>G

Select item 14632112604.

rs1463211260 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:73789062 (GRCh38)
14:74255765 (GRCh37)
Canonical SPDI:: NC_000014.9:73789061:G:A
Gene:: MIDEAS (Varview), MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.73789062G>A, NC_000014.8:g.74255765G>A, NR_109995.1:n.186G>A

Select item 14601294985.

rs1460129498 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 14:73803329 (GRCh38)
14:74270032 (GRCh37)
Canonical SPDI:: NC_000014.9:73803328:G:A,NC_000014.9:73803328:G:T
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.73803329G>A, NC_000014.9:g.73803329G>T, NC_000014.8:g.74270032G>A, NC_000014.8:g.74270032G>T, NR_109995.1:n.685G>A, NR_109995.1:n.685G>T

Select item 14529944366.

rs1452994436 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:73802938 (GRCh38)
14:74269641 (GRCh37)
Canonical SPDI:: NC_000014.9:73802937:T:C
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.73802938T>C, NC_000014.8:g.74269641T>C, NR_109995.1:n.294T>C

Select item 14521823567.

rs1452182356 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 14:73803094 (GRCh38)
14:74269797 (GRCh37)
Canonical SPDI:: NC_000014.9:73803093:T:C,NC_000014.9:73803093:T:G
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
T=0.5/1 (SGDP_PRJ)
HGVS:: NC_000014.9:g.73803094T>C, NC_000014.9:g.73803094T>G, NC_000014.8:g.74269797T>C, NC_000014.8:g.74269797T>G, NR_109995.1:n.450T>C, NR_109995.1:n.450T>G

Select item 14491391108.

rs1449139110 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 14:73803437 (GRCh38)
14:74270140 (GRCh37)
Canonical SPDI:: NC_000014.9:73803436:C:G
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.73803437C>G, NC_000014.8:g.74270140C>G, NR_109995.1:n.793C>G

Select item 14488738379.

rs1448873837 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 14:73803278 (GRCh38)
14:74269981 (GRCh37)
Canonical SPDI:: NC_000014.9:73803277:T:C
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
HGVS:: NC_000014.9:g.73803278T>C, NC_000014.8:g.74269981T>C, NR_109995.1:n.634T>C

Select item 144867357210.

rs1448673572 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 14:73802907 (GRCh38)
14:74269610 (GRCh37)
Canonical SPDI:: NC_000014.9:73802906:A:T
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.73802907A>T, NC_000014.8:g.74269610A>T, NR_109995.1:n.263A>T

Select item 144739502911.

rs1447395029 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 14:73789092 (GRCh38)
14:74255795 (GRCh37)
Canonical SPDI:: NC_000014.9:73789091:C:A,NC_000014.9:73789091:C:T
Gene:: MIDEAS (Varview), MIDEAS-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000014.9:g.73789092C>A, NC_000014.9:g.73789092C>T, NC_000014.8:g.74255795C>A, NC_000014.8:g.74255795C>T, NR_109995.1:n.216C>A, NR_109995.1:n.216C>T

Select item 144148014012.

rs1441480140 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 14:73787407 (GRCh38)
14:74254110 (GRCh37)
Canonical SPDI:: NC_000014.9:73787406:C:A
Gene:: MIDEAS (Varview), MIDEAS-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.73787407C>A, NC_000014.8:g.74254110C>A, NR_109995.1:n.48C>A

Select item 143637026913.

rs1436370269 has merged into rs979198997 [Homo sapiens]

Variant type:: DELINS
Alleles:: AGC>-,AGCAGCAGC [Show Flanks]
Chromosome:: 14:73802963 (GRCh38)
14:74269666 (GRCh37)
Canonical SPDI:: NC_000014.9:73802950:AGCAGCAGCAGCAGC:AGCAGCAGCAGC,NC_000014.9:73802950:AGCAGCAGCAGCAGC:AGCAGCAGCAGCAGCAGCAGC
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGCAGCAGCAGCAGCAGCAGC=0./0 (ALFA)
HGVS:: NC_000014.9:g.73802951AGC[4], NC_000014.9:g.73802951AGC[7], NC_000014.8:g.74269654AGC[4], NC_000014.8:g.74269654AGC[7], NR_109995.1:n.307AGC[4], NR_109995.1:n.307AGC[7]

Select item 143567361514.

rs1435673615 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ACATTGA [Show Flanks]
Chromosome:: 14:73803116 (GRCh38)
14:74269820 (GRCh37)
Canonical SPDI:: NC_000014.9:73803116:A:AACATTGA
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AACATTGA=0./0 (ALFA)
AACATTG=0.000008/2 (TOPMED)
AACATTG=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.73803117_73803118insACATTGA, NC_000014.8:g.74269820_74269821insACATTGA, NR_109995.1:n.473_474insACATTGA

Select item 142966195415.

rs1429661954 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACAAAAAT>- [Show Flanks]
Chromosome:: 14:73803454 (GRCh38)
14:74270157 (GRCh37)
Canonical SPDI:: NC_000014.9:73803446:CAAAAATACAAAAAT:CAAAAAT
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CAAAAAT=0./0 (ALFA)
-=0.000022/3 (GnomAD)
-=0.000053/14 (TOPMED)
HGVS:: NC_000014.9:g.73803454_73803461del, NC_000014.8:g.74270157_74270164del, NR_109995.1:n.810_817del

Select item 142797669616.

rs1427976696 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 14:73803222 (GRCh38)
14:74269925 (GRCh37)
Canonical SPDI:: NC_000014.9:73803221:C:G
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.73803222C>G, NC_000014.8:g.74269925C>G, NR_109995.1:n.578C>G

Select item 142764532917.

rs1427645329 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 14:73803150 (GRCh38)
14:74269853 (GRCh37)
Canonical SPDI:: NC_000014.9:73803149:A:C,NC_000014.9:73803149:A:G
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0./0 (GnomAD)
HGVS:: NC_000014.9:g.73803150A>C, NC_000014.9:g.73803150A>G, NC_000014.8:g.74269853A>C, NC_000014.8:g.74269853A>G, NR_109995.1:n.506A>C, NR_109995.1:n.506A>G

Select item 142576778218.

rs1425767782 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:73803585 (GRCh38)
14:74270288 (GRCh37)
Canonical SPDI:: NC_000014.9:73803584:G:A
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000014.9:g.73803585G>A, NC_000014.8:g.74270288G>A, NR_109995.1:n.941G>A

Select item 142010994519.

rs1420109945 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 14:73803105 (GRCh38)
14:74269808 (GRCh37)
Canonical SPDI:: NC_000014.9:73803104:G:A,NC_000014.9:73803104:G:C
Gene:: MIDEAS-AS1 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.73803105G>A, NC_000014.9:g.73803105G>C, NC_000014.8:g.74269808G>A, NC_000014.8:g.74269808G>C, NR_109995.1:n.461G>A, NR_109995.1:n.461G>C

Select item 141765960520.

rs1417659605 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: 14:73789090 (GRCh38)
14:74255793 (GRCh37)
Canonical SPDI:: NC_000014.9:73789089:CCCCC:CCCC
Gene:: MIDEAS (Varview), MIDEAS-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCC=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.73789094del, NC_000014.8:g.74255797del, NR_109995.1:n.218del

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