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Links from Nucleotide

Items: 1 to 20 of 781

2.

rs1489932894 [Homo sapiens]
    Variant type:
    SNV
    Alleles:
    A>C,T [Show Flanks]
    Chromosome:
    9:127804315 (GRCh38)
    9:130566594 (GRCh37)
    Canonical SPDI:
    NC_000009.12:127804314:A:C,NC_000009.12:127804314:A:T
    Gene:
    FPGS (Varview)
    Functional Consequence:
    coding_sequence_variant,non_coding_transcript_variant,missense_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    T=0./0 (ALFA)
    HGVS:
    NC_000009.12:g.127804315A>C, NC_000009.12:g.127804315A>T, NC_000009.11:g.130566594A>C, NC_000009.11:g.130566594A>T, NG_023245.1:g.6441A>C, NG_023245.1:g.6441A>T, NM_004957.6:c.169A>C, NM_004957.6:c.169A>T, NM_004957.5:c.169A>C, NM_004957.5:c.169A>T, NM_004957.4:c.169A>C, NM_004957.4:c.169A>T, NM_001018078.2:c.19A>C, NM_001018078.2:c.19A>T, NM_001018078.1:c.19A>C, NM_001018078.1:c.19A>T, NR_110170.1:n.236A>C, NR_110170.1:n.236A>T, NM_001288803.1:c.169A>C, NM_001288803.1:c.169A>T, XM_005251864.5:c.169A>C, XM_005251864.5:c.169A>T, XM_005251864.4:c.169A>C, XM_005251864.4:c.169A>T, XM_005251864.3:c.169A>C, XM_005251864.3:c.169A>T, XM_005251864.2:c.169A>C, XM_005251864.2:c.169A>T, XM_005251864.1:c.169A>C, XM_005251864.1:c.169A>T, XM_047423126.1:c.19A>C, XM_047423126.1:c.19A>T, XM_047423127.1:c.19A>C, XM_047423127.1:c.19A>T, NP_004948.4:p.Thr57Pro, NP_004948.4:p.Thr57Ser, NP_001018088.1:p.Thr7Pro, NP_001018088.1:p.Thr7Ser, NP_001275732.1:p.Thr57Pro, NP_001275732.1:p.Thr57Ser, XP_005251921.1:p.Thr57Pro, XP_005251921.1:p.Thr57Ser, XP_047279082.1:p.Thr7Pro, XP_047279082.1:p.Thr7Ser, XP_047279083.1:p.Thr7Pro, XP_047279083.1:p.Thr7Ser
    5.

    rs1486617672 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      C>G,T [Show Flanks]
      Chromosome:
      9:127810087 (GRCh38)
      9:130572366 (GRCh37)
      Canonical SPDI:
      NC_000009.12:127810086:C:G,NC_000009.12:127810086:C:T
      Gene:
      FPGS (Varview)
      Functional Consequence:
      coding_sequence_variant,non_coding_transcript_variant,missense_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      T=0./0 (ALFA)
      T=0.000004/1 (GnomAD_exomes)
      T=0.000011/3 (TOPMED)
      G=0.000014/2 (GnomAD)
      G=0.00092/26 (TOMMO)
      G=0.001092/2 (Korea1K)
      HGVS:
      NC_000009.12:g.127810087C>G, NC_000009.12:g.127810087C>T, NC_000009.11:g.130572366C>G, NC_000009.11:g.130572366C>T, NG_023245.1:g.12213C>G, NG_023245.1:g.12213C>T, NM_004957.6:c.1268C>G, NM_004957.6:c.1268C>T, NM_004957.5:c.1268C>G, NM_004957.5:c.1268C>T, NM_004957.4:c.1268C>G, NM_004957.4:c.1268C>T, NM_001018078.2:c.1118C>G, NM_001018078.2:c.1118C>T, NM_001018078.1:c.1118C>G, NM_001018078.1:c.1118C>T, NR_110170.1:n.1316C>G, NR_110170.1:n.1316C>T, NM_001288803.1:c.1190C>G, NM_001288803.1:c.1190C>T, XM_005251864.5:c.1268C>G, XM_005251864.5:c.1268C>T, XM_005251864.4:c.1268C>G, XM_005251864.4:c.1268C>T, XM_005251864.3:c.1268C>G, XM_005251864.3:c.1268C>T, XM_005251864.2:c.1268C>G, XM_005251864.2:c.1268C>T, XM_005251864.1:c.1268C>G, XM_005251864.1:c.1268C>T, XM_047423126.1:c.1118C>G, XM_047423126.1:c.1118C>T, XM_047423127.1:c.1118C>G, XM_047423127.1:c.1118C>T, NP_004948.4:p.Ala423Gly, NP_004948.4:p.Ala423Val, NP_001018088.1:p.Ala373Gly, NP_001018088.1:p.Ala373Val, NP_001275732.1:p.Ala397Gly, NP_001275732.1:p.Ala397Val, XP_005251921.1:p.Ala423Gly, XP_005251921.1:p.Ala423Val, XP_047279082.1:p.Ala373Gly, XP_047279082.1:p.Ala373Val, XP_047279083.1:p.Ala373Gly, XP_047279083.1:p.Ala373Val
      7.

      rs1483921673 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        C>T [Show Flanks]
        Chromosome:
        9:127813598 (GRCh38)
        9:130575877 (GRCh37)
        Canonical SPDI:
        NC_000009.12:127813597:C:T
        Gene:
        FPGS (Varview)
        Functional Consequence:
        coding_sequence_variant,synonymous_variant,non_coding_transcript_variant,intron_variant
        Validated:
        by frequency
        MAF:
        T=0.000011/2 (GnomAD_exomes)
        HGVS:
        9.

        rs1479993842 [Homo sapiens]
          Variant type:
          SNV
          Alleles:
          G>A [Show Flanks]
          Chromosome:
          9:127802916 (GRCh38)
          9:130565195 (GRCh37)
          Canonical SPDI:
          NC_000009.12:127802915:G:A
          Gene:
          FPGS (Varview)
          Functional Consequence:
          5_prime_UTR_variant,genic_upstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant
          HGVS:
          10.

          rs1479771408 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            C>T [Show Flanks]
            Chromosome:
            9:127802888 (GRCh38)
            9:130565167 (GRCh37)
            Canonical SPDI:
            NC_000009.12:127802887:C:T
            Gene:
            FPGS (Varview)
            Functional Consequence:
            5_prime_UTR_variant,genic_upstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            T=0.000108/2 (ALFA)
            T=0.000058/8 (GnomAD)
            T=0.000087/23 (TOPMED)
            T=0.000223/1 (Estonian)
            T=0.000312/2 (1000Genomes)
            HGVS:
            12.

            rs1478308562 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              A>G,T [Show Flanks]
              Chromosome:
              9:127802969 (GRCh38)
              9:130565248 (GRCh37)
              Canonical SPDI:
              NC_000009.12:127802968:A:G,NC_000009.12:127802968:A:T
              Gene:
              FPGS (Varview)
              Functional Consequence:
              non_coding_transcript_variant,upstream_transcript_variant,coding_sequence_variant,genic_upstream_transcript_variant,synonymous_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              G=0./0 (ALFA)
              G=0.000004/1 (TOPMED)
              G=0.000007/1 (GnomAD)
              G=0.000156/1 (1000Genomes)
              T=0.000347/1 (KOREAN)
              HGVS:
              13.
              14.

              rs1476424254 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                T>G [Show Flanks]
                Chromosome:
                9:127813785 (GRCh38)
                9:130576064 (GRCh37)
                Canonical SPDI:
                NC_000009.12:127813784:T:G
                Gene:
                FPGS (Varview)
                Functional Consequence:
                intron_variant,3_prime_UTR_variant,non_coding_transcript_variant
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                G=0.000071/1 (ALFA)
                G=0.000004/1 (TOPMED)
                G=0.000007/1 (GnomAD)
                G=0.000035/1 (TOMMO)
                HGVS:
                15.

                rs1476093373 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  A>G [Show Flanks]
                  Chromosome:
                  9:127802901 (GRCh38)
                  9:130565180 (GRCh37)
                  Canonical SPDI:
                  NC_000009.12:127802900:A:G
                  Gene:
                  FPGS (Varview)
                  Functional Consequence:
                  non_coding_transcript_variant,genic_upstream_transcript_variant,upstream_transcript_variant,5_prime_UTR_variant
                  Validated:
                  by frequency,by alfa
                  MAF:
                  G=0./0 (ALFA)
                  G=0.000015/2 (GnomAD)
                  HGVS:
                  16.

                  rs1476066100 [Homo sapiens]
                    Variant type:
                    SNV
                    Alleles:
                    C>T [Show Flanks]
                    Chromosome:
                    9:127813899 (GRCh38)
                    9:130576178 (GRCh37)
                    Canonical SPDI:
                    NC_000009.12:127813898:C:T
                    Gene:
                    FPGS (Varview)
                    Functional Consequence:
                    intron_variant,3_prime_UTR_variant,non_coding_transcript_variant
                    Validated:
                    by frequency,by alfa
                    MAF:
                    T=0./0 (ALFA)
                    T=0.000004/1 (TOPMED)
                    HGVS:
                    17.

                    rs1475666881 [Homo sapiens]
                      Variant type:
                      SNV
                      Alleles:
                      G>A [Show Flanks]
                      Chromosome:
                      9:127808620 (GRCh38)
                      9:130570899 (GRCh37)
                      Canonical SPDI:
                      NC_000009.12:127808619:G:A
                      Gene:
                      FPGS (Varview)
                      Functional Consequence:
                      coding_sequence_variant,synonymous_variant,non_coding_transcript_variant
                      Validated:
                      by frequency
                      MAF:
                      A=0.000004/1 (GnomAD_exomes)
                      HGVS:
                      19.

                      rs1474434364 [Homo sapiens]
                        Variant type:
                        SNV
                        Alleles:
                        G>A [Show Flanks]
                        Chromosome:
                        9:127813497 (GRCh38)
                        9:130575776 (GRCh37)
                        Canonical SPDI:
                        NC_000009.12:127813496:G:A
                        Gene:
                        FPGS (Varview)
                        Functional Consequence:
                        coding_sequence_variant,intron_variant,non_coding_transcript_variant,missense_variant
                        Validated:
                        by frequency,by alfa,by cluster
                        MAF:
                        A=0./0 (ALFA)
                        A=0.000004/1 (TOPMED)
                        A=0.000007/1 (GnomAD)
                        HGVS:

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