SNP Links for Nucleotide (Select 572153106) - SNP

Links from Nucleotide

Items: 1 to 20 of 212

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Select item 14907092101.

rs1490709210 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 2:194416219 (GRCh38)
2:195280943 (GRCh37)
Canonical SPDI:: NC_000002.12:194416218:G:C
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.194416219G>C, NC_000002.11:g.195280943G>C, NR_110222.1:n.560G>C

Select item 14889692982.

rs1488969298 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:194374237 (GRCh38)
2:195238961 (GRCh37)
Canonical SPDI:: NC_000002.12:194374236:A:G
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.194374237A>G, NC_000002.11:g.195238961A>G, NR_110222.1:n.385A>G

Select item 14887858663.

rs1488785866 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 2:194368981 (GRCh38)
2:195233705 (GRCh37)
Canonical SPDI:: NC_000002.12:194368980:T:G
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000002.12:g.194368981T>G, NC_000002.11:g.195233705T>G, NR_110222.1:n.192T>G

Select item 14818947264.

rs1481894726 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,T [Show Flanks]
Chromosome:: 2:194369038 (GRCh38)
2:195233762 (GRCh37)
Canonical SPDI:: NC_000002.12:194369037:A:C,NC_000002.12:194369037:A:T
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.000007/1 (GnomAD)
A=0.5/1 (SGDP_PRJ)
HGVS:: NC_000002.12:g.194369038A>C, NC_000002.12:g.194369038A>T, NC_000002.11:g.195233762A>C, NC_000002.11:g.195233762A>T, NR_110222.1:n.249A>C, NR_110222.1:n.249A>T

Select item 14774644975.

rs1477464497 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:194368859 (GRCh38)
2:195233583 (GRCh37)
Canonical SPDI:: NC_000002.12:194368858:T:C
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000002.12:g.194368859T>C, NC_000002.11:g.195233583T>C, NR_110222.1:n.70T>C

Select item 14744951426.

rs1474495142 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 2:194419364 (GRCh38)
2:195284088 (GRCh37)
Canonical SPDI:: NC_000002.12:194419363:G:C
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000015/4 (TOPMED)
HGVS:: NC_000002.12:g.194419364G>C, NC_000002.11:g.195284088G>C, NR_110222.1:n.816G>C

Select item 14701047437.

rs1470104743 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 2:194419399 (GRCh38)
2:195284123 (GRCh37)
Canonical SPDI:: NC_000002.12:194419398:G:
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000011/3 (TOPMED)
HGVS:: NC_000002.12:g.194419399del, NC_000002.11:g.195284123del, NR_110222.1:n.851del

Select item 14685221648.

rs1468522164 [Homo sapiens]

Variant type:: DEL
Alleles:: C>- [Show Flanks]
Chromosome:: 2:194368910 (GRCh38)
2:195233634 (GRCh37)
Canonical SPDI:: NC_000002.12:194368909:C:
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000002.12:g.194368910del, NC_000002.11:g.195233634del, NR_110222.1:n.121del

Select item 14647467759.

rs1464746775 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:194419490 (GRCh38)
2:195284214 (GRCh37)
Canonical SPDI:: NC_000002.12:194419489:T:C
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.194419490T>C, NC_000002.11:g.195284214T>C, NR_110222.1:n.942T>C

Select item 146238560210.

rs1462385602 [Homo sapiens]

Variant type:: DELINS
Alleles:: TGAC>- [Show Flanks]
Chromosome:: 2:194377324 (GRCh38)
2:195242048 (GRCh37)
Canonical SPDI:: NC_000002.12:194377321:ACTGAC:AC
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: AC=0.000071/1 (ALFA)
-=0.000015/4 (TOPMED)
HGVS:: NC_000002.12:g.194377324_194377327del, NC_000002.11:g.195242048_195242051del, NR_110222.1:n.523_526del

Select item 146142480311.

rs1461424803 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 2:194416277 (GRCh38)
2:195281001 (GRCh37)
Canonical SPDI:: NC_000002.12:194416276:T:G
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000002.12:g.194416277T>G, NC_000002.11:g.195281001T>G, NR_110222.1:n.618T>G

Select item 145528694812.

rs1455286948 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 2:194416318 (GRCh38)
2:195281042 (GRCh37)
Canonical SPDI:: NC_000002.12:194416317:C:G
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.194416318C>G, NC_000002.11:g.195281042C>G, NR_110222.1:n.659C>G

Select item 145493088013.

rs1454930880 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:194369071 (GRCh38)
2:195233795 (GRCh37)
Canonical SPDI:: NC_000002.12:194369070:A:G
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.194369071A>G, NC_000002.11:g.195233795A>G, NR_110222.1:n.282A>G

Select item 145445080814.

rs1454450808 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:194368991 (GRCh38)
2:195233715 (GRCh37)
Canonical SPDI:: NC_000002.12:194368990:T:C
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000015/4 (TOPMED)
HGVS:: NC_000002.12:g.194368991T>C, NC_000002.11:g.195233715T>C, NR_110222.1:n.202T>C

Select item 144923453815.

rs1449234538 [Homo sapiens]

Variant type:: DELINS
Alleles:: AGA>- [Show Flanks]
Chromosome:: 2:194374196 (GRCh38)
2:195238920 (GRCh37)
Canonical SPDI:: NC_000002.12:194374190:GAAGAAGA:GAAGA
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAAGA=0./0 (ALFA)
-=0.000026/7 (TOPMED)
-=0.000212/4 (TOMMO)
-=0.002729/5 (Korea1K)
HGVS:: NC_000002.12:g.194374193AGA[1], NC_000002.11:g.195238917AGA[1], NR_110222.1:n.341AGA[1]

Select item 144623417316.

rs1446234173 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->ACG
Chromosome:: no mapping
Canonical SPDI:

Select item 144388785317.

rs1443887853 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:194374211 (GRCh38)
2:195238935 (GRCh37)
Canonical SPDI:: NC_000002.12:194374210:C:T
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
HGVS:: NC_000002.12:g.194374211C>T, NC_000002.11:g.195238935C>T, NR_110222.1:n.359C>T

Select item 144076323018.

rs1440763230 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:194368899 (GRCh38)
2:195233623 (GRCh37)
Canonical SPDI:: NC_000002.12:194368898:A:G
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.194368899A>G, NC_000002.11:g.195233623A>G, NR_110222.1:n.110A>G

Select item 143616600619.

rs1436166006 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 2:194368987 (GRCh38)
2:195233711 (GRCh37)
Canonical SPDI:: NC_000002.12:194368986:G:A,NC_000002.12:194368986:G:T
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.194368987G>A, NC_000002.12:g.194368987G>T, NC_000002.11:g.195233711G>A, NC_000002.11:g.195233711G>T, NR_110222.1:n.198G>A, NR_110222.1:n.198G>T

Select item 142830236120.

rs1428302361 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 2:194416314 (GRCh38)
2:195281039 (GRCh37)
Canonical SPDI:: NC_000002.12:194416314:T:TT
Gene:: LINC01821 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.194416315dup, NC_000002.11:g.195281039dup, NR_110222.1:n.656dup

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