SNP Links for Nucleotide (Select 574957309) - SNP

Links from Nucleotide

Items: 1 to 20 of 963

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Select item 14904150191.

rs1490415019 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>-,CC [Show Flanks]
Chromosome:: 16:2839917 (GRCh38)
16:2889918 (GRCh37)
Canonical SPDI:: NC_000016.10:2839916:CCCCCC:CCCCC,NC_000016.10:2839916:CCCCCC:CCCCCCC
Gene:: PRSS30P (Varview), LOC124903628 (Varview)
Functional Consequence:: 500B_downstream_variant,non_coding_transcript_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCCCC=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
-=0.000156/1 (1000Genomes)
-=0.000546/1 (Korea1K)
HGVS:: NC_000016.10:g.2839922del, NC_000016.10:g.2839922dup, NC_000016.9:g.2889923del, NC_000016.9:g.2889923dup, NW_013171812.1:g.19384del, NW_013171812.1:g.19384dup, NR_026864.2:n.2619del, NR_026864.2:n.2619dup, NR_026864.1:n.2619del, NR_026864.1:n.2619dup, NM_178453.2:c.180del, NM_178453.2:c.180dup, NM_178453.1:c.180del, NM_178453.1:c.180dup

Select item 14902527232.

rs1490252723 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:2839617 (GRCh38)
16:2889618 (GRCh37)
Canonical SPDI:: NC_000016.10:2839616:C:T
Gene:: PRSS30P (Varview), LOC124903628 (Varview)
Functional Consequence:: 500B_downstream_variant,non_coding_transcript_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.2839617C>T, NC_000016.9:g.2889618C>T, NW_013171812.1:g.19079C>T, NR_026864.2:n.2919G>A, NR_026864.1:n.2919G>A, NM_178453.2:c.*39G>A

Select item 14893378603.

rs1489337860 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:2841705 (GRCh38)
16:2891706 (GRCh37)
Canonical SPDI:: NC_000016.10:2841704:C:T
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.2841705C>T, NC_000016.9:g.2891706C>T, NW_013171812.1:g.21167C>T, NR_026864.2:n.1047G>A, NR_026864.1:n.1047G>A, NM_178453.2:c.-27G>A

Select item 14891181404.

rs1489118140 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 16:2842102 (GRCh38)
16:2892103 (GRCh37)
Canonical SPDI:: NC_000016.10:2842101:C:T
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000016.10:g.2842102C>T, NC_000016.9:g.2892103C>T, NW_013171812.1:g.21564C>T, NR_026864.2:n.650G>A, NR_026864.1:n.650G>A

Select item 14886612125.

rs1488661212 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 16:2840678 (GRCh38)
16:2890679 (GRCh37)
Canonical SPDI:: NC_000016.10:2840677:T:G
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.0075/89 (ALFA)
G=0.00085/24 (TOMMO)
G=0.00164/3 (Korea1K)
G=0.0025/16 (1000Genomes)
G=0.00857/25 (KOREAN)
HGVS:: NC_000016.10:g.2840678T>G, NC_000016.9:g.2890679T>G, NW_013171812.1:g.20140T>G, NR_026864.2:n.2074A>C, NR_026864.1:n.2074A>C

Select item 14883066846.

rs1488306684 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:2840822 (GRCh38)
16:2890823 (GRCh37)
Canonical SPDI:: NC_000016.10:2840821:T:C
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.000084/1 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.2840822T>C, NC_000016.9:g.2890823T>C, NW_013171812.1:g.20284T>C, NR_026864.2:n.1930A>G, NR_026864.1:n.1930A>G

Select item 14877623107.

rs1487762310 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 16:2840635 (GRCh38)
16:2890636 (GRCh37)
Canonical SPDI:: NC_000016.10:2840634:T:C
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.2840635T>C, NC_000016.9:g.2890636T>C, NW_013171812.1:g.20097T>C, NR_026864.2:n.2117A>G, NR_026864.1:n.2117A>G

Select item 14874280288.

rs1487428028 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:2841012 (GRCh38)
16:2891013 (GRCh37)
Canonical SPDI:: NC_000016.10:2841011:A:G
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000016.10:g.2841012A>G, NC_000016.9:g.2891013A>G, NW_013171812.1:g.20474A>G, NR_026864.2:n.1740T>C, NR_026864.1:n.1740T>C

Select item 14873764739.

rs1487376473 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 16:2840939 (GRCh38)
16:2890940 (GRCh37)
Canonical SPDI:: NC_000016.10:2840938:G:A
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000016.10:g.2840939G>A, NC_000016.9:g.2890940G>A, NW_013171812.1:g.20401G>A, NR_026864.2:n.1813C>T, NR_026864.1:n.1813C>T

Select item 148640660510.

rs1486406605 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 16:2842725 (GRCh38)
16:2892726 (GRCh37)
Canonical SPDI:: NC_000016.10:2842724:G:C
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000318/5 (TOMMO)
HGVS:: NC_000016.10:g.2842725G>C, NC_000016.9:g.2892726G>C, NW_013171812.1:g.22187G>C, NR_026864.2:n.27C>G, NR_026864.1:n.27C>G

Select item 148557235311.

rs1485572353 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 16:2841686 (GRCh38)
16:2891687 (GRCh37)
Canonical SPDI:: NC_000016.10:2841685:G:T
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.2841686G>T, NC_000016.9:g.2891687G>T, NW_013171812.1:g.21148G>T, NR_026864.2:n.1066C>A, NR_026864.1:n.1066C>A, NM_178453.2:c.-8C>A

Select item 148509446112.

rs1485094461 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 16:2842494 (GRCh38)
16:2892495 (GRCh37)
Canonical SPDI:: NC_000016.10:2842493:G:C
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.2842494G>C, NC_000016.9:g.2892495G>C, NW_013171812.1:g.21956G>C, NR_026864.2:n.258C>G, NR_026864.1:n.258C>G

Select item 148488006513.

rs1484880065 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 16:2839739 (GRCh38)
16:2889740 (GRCh37)
Canonical SPDI:: NC_000016.10:2839738:G:C
Gene:: PRSS30P (Varview), LOC124903628 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000312/2 (1000Genomes)
HGVS:: NC_000016.10:g.2839739G>C, NC_000016.9:g.2889740G>C, NW_013171812.1:g.19201G>C, NR_026864.2:n.2797C>G, NR_026864.1:n.2797C>G, NM_178453.2:c.358C>G, NM_178453.1:c.358C>G

Select item 148487173714.

rs1484871737 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 16:2841791 (GRCh38)
16:2891792 (GRCh37)
Canonical SPDI:: NC_000016.10:2841790:T:G
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.00825/172 (ALFA)
G=0.00149/25 (TOMMO)
G=0.00153/144 (GnomAD_exomes)
G=0.01198/35 (KOREAN)
HGVS:: NC_000016.10:g.2841791T>G, NC_000016.9:g.2891792T>G, NW_013171812.1:g.21253T>G, NR_026864.2:n.961A>C, NR_026864.1:n.961A>C, NM_178453.2:c.-113A>C

Select item 148482004115.

rs1484820041 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 16:2842573 (GRCh38)
16:2892574 (GRCh37)
Canonical SPDI:: NC_000016.10:2842572:G:T
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000016.10:g.2842573G>T, NC_000016.9:g.2892574G>T, NW_013171812.1:g.22035G>T, NR_026864.2:n.179C>A, NR_026864.1:n.179C>A

Select item 148464955116.

rs1484649551 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 16:2841918 (GRCh38)
16:2891919 (GRCh37)
Canonical SPDI:: NC_000016.10:2841917:G:C
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000015/4 (TOPMED)
HGVS:: NC_000016.10:g.2841918G>C, NC_000016.9:g.2891919G>C, NW_013171812.1:g.21380G>C, NR_026864.2:n.834C>G, NR_026864.1:n.834C>G

Select item 148235514017.

rs1482355140 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 16:2841638 (GRCh38)
16:2891639 (GRCh37)
Canonical SPDI:: NC_000016.10:2841637:C:A
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: A=0.000009/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.2841638C>A, NC_000016.9:g.2891639C>A, NW_013171812.1:g.21100C>A, NR_026864.2:n.1114G>T, NR_026864.1:n.1114G>T

Select item 148193906218.

rs1481939062 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:2842484 (GRCh38)
16:2892485 (GRCh37)
Canonical SPDI:: NC_000016.10:2842483:A:G
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD_exomes)
HGVS:: NC_000016.10:g.2842484A>G, NC_000016.9:g.2892485A>G, NW_013171812.1:g.21946A>G, NR_026864.2:n.268T>C, NR_026864.1:n.268T>C

Select item 148071470019.

rs1480714700 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 16:2842657 (GRCh38)
16:2892658 (GRCh37)
Canonical SPDI:: NC_000016.10:2842656:C:A,NC_000016.10:2842656:C:G
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.2842657C>A, NC_000016.10:g.2842657C>G, NC_000016.9:g.2892658C>A, NC_000016.9:g.2892658C>G, NW_013171812.1:g.22119C>A, NW_013171812.1:g.22119C>G, NR_026864.2:n.95G>T, NR_026864.2:n.95G>C, NR_026864.1:n.95G>T, NR_026864.1:n.95G>C

Select item 148053421220.

rs1480534212 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 16:2841614 (GRCh38)
16:2891615 (GRCh37)
Canonical SPDI:: NC_000016.10:2841613:A:G
Gene:: PRSS30P (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000016.10:g.2841614A>G, NC_000016.9:g.2891615A>G, NW_013171812.1:g.21076A>G, NR_026864.2:n.1138T>C, NR_026864.1:n.1138T>C

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