SNP Links for Nucleotide (Select 586804791) - SNP

Links from Nucleotide

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Select item 14819584041.

rs1481958404 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:36687433 (GRCh38)
19:37178335 (GRCh37)
Canonical SPDI:: NC_000019.10:36687432:A:G
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,5_prime_UTR_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000023/6 (TOPMED)
G=0.000035/1 (TOMMO)
HGVS:: NC_000019.10:g.36687433A>G, NC_000019.9:g.37178335A>G, NM_001387762.1:c.-369A>G, NM_001387761.1:c.-369A>G, XM_047438320.1:c.-499A>G, XM_047438329.1:c.-499A>G, XM_047438330.1:c.-369A>G, XM_047438331.1:c.-365A>G, XM_047438332.1:c.-499A>G, XM_047438334.1:c.-493A>G, XM_047438333.1:c.-369A>G, NR_110707.1:n.17T>C, NR_110708.1:n.17T>C

Select item 14790515612.

rs1479051561 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:36686011 (GRCh38)
19:37176913 (GRCh37)
Canonical SPDI:: NC_000019.10:36686010:G:A
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.36686011G>A, NC_000019.9:g.37176913G>A, NR_110707.1:n.308C>T, NR_110708.1:n.308C>T

Select item 14790252543.

rs1479025254 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 19:36686714 (GRCh38)
19:37177616 (GRCh37)
Canonical SPDI:: NC_000019.10:36686713:G:A,NC_000019.10:36686713:G:T
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000019.10:g.36686714G>A, NC_000019.10:g.36686714G>T, NC_000019.9:g.37177616G>A, NC_000019.9:g.37177616G>T, NR_110707.1:n.275C>T, NR_110707.1:n.275C>A, NR_110708.1:n.275C>T, NR_110708.1:n.275C>A

Select item 14757337314.

rs1475733731 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:36687311 (GRCh38)
19:37178213 (GRCh37)
Canonical SPDI:: NC_000019.10:36687310:C:T
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,5_prime_UTR_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
HGVS:: NC_000019.10:g.36687311C>T, NC_000019.9:g.37178213C>T, NM_001387762.1:c.-491C>T, NM_001387761.1:c.-491C>T, XM_047438320.1:c.-621C>T, XM_047438329.1:c.-621C>T, XM_047438330.1:c.-491C>T, XM_047438331.1:c.-487C>T, XM_047438332.1:c.-621C>T, XM_047438334.1:c.-615C>T, XM_047438333.1:c.-491C>T, NR_110707.1:n.139G>A, NR_110708.1:n.139G>A

Select item 14676810815.

rs1467681081 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 19:36687437 (GRCh38)
19:37178339 (GRCh37)
Canonical SPDI:: NC_000019.10:36687436:G:A,NC_000019.10:36687436:G:T
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,5_prime_UTR_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000066/1 (ALFA)
T=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000223/1 (Estonian)
HGVS:: NC_000019.10:g.36687437G>A, NC_000019.10:g.36687437G>T, NC_000019.9:g.37178339G>A, NC_000019.9:g.37178339G>T, NM_001387762.1:c.-365G>A, NM_001387762.1:c.-365G>T, NM_001387761.1:c.-365G>A, NM_001387761.1:c.-365G>T, XM_047438320.1:c.-495G>A, XM_047438320.1:c.-495G>T, XM_047438329.1:c.-495G>A, XM_047438329.1:c.-495G>T, XM_047438330.1:c.-365G>A, XM_047438330.1:c.-365G>T, XM_047438331.1:c.-361G>A, XM_047438331.1:c.-361G>T, XM_047438332.1:c.-495G>A, XM_047438332.1:c.-495G>T, XM_047438334.1:c.-489G>A, XM_047438334.1:c.-489G>T, XM_047438333.1:c.-365G>A, XM_047438333.1:c.-365G>T, NR_110707.1:n.13C>T, NR_110707.1:n.13C>A, NR_110708.1:n.13C>T, NR_110708.1:n.13C>A

Select item 14622860116.

rs1462286011 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:36687358 (GRCh38)
19:37178260 (GRCh37)
Canonical SPDI:: NC_000019.10:36687357:C:T
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.36687358C>T, NC_000019.9:g.37178260C>T, NM_001387762.1:c.-444C>T, NM_001387761.1:c.-444C>T, XM_047438320.1:c.-574C>T, XM_047438329.1:c.-574C>T, XM_047438330.1:c.-444C>T, XM_047438331.1:c.-440C>T, XM_047438332.1:c.-574C>T, XM_047438334.1:c.-568C>T, XM_047438333.1:c.-444C>T, NR_110707.1:n.92G>A, NR_110708.1:n.92G>A

Select item 14607111347.

rs1460711134 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACAC>- [Show Flanks]
Chromosome:: 19:36687321 (GRCh38)
19:37178223 (GRCh37)
Canonical SPDI:: NC_000019.10:36687316:ACACACAC:ACAC
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: ACACACAC=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.36687317AC[2], NC_000019.9:g.37178219AC[2], NM_001387762.1:c.-485AC[2], NM_001387761.1:c.-485AC[2], XM_047438320.1:c.-615AC[2], XM_047438329.1:c.-615AC[2], XM_047438330.1:c.-485AC[2], XM_047438331.1:c.-481AC[2], XM_047438332.1:c.-615AC[2], XM_047438334.1:c.-609AC[2], XM_047438333.1:c.-485AC[2], NR_110707.1:n.126GT[2], NR_110708.1:n.126GT[2]

Select item 14530123158.

rs1453012315 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:36685464 (GRCh38)
19:37176366 (GRCh37)
Canonical SPDI:: NC_000019.10:36685463:G:A
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.36685464G>A, NC_000019.9:g.37176366G>A, NR_110707.1:n.855C>T, NR_110708.1:n.530C>T

Select item 14529080929.

rs1452908092 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 19:36686696 (GRCh38)
19:37177598 (GRCh37)
Canonical SPDI:: NC_000019.10:36686695:G:C
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.36686696G>C, NC_000019.9:g.37177598G>C, NR_110707.1:n.293C>G, NR_110708.1:n.293C>G

Select item 145265714410.

rs1452657144 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 19:36685865 (GRCh38)
19:37176767 (GRCh37)
Canonical SPDI:: NC_000019.10:36685864:A:C
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,non_coding_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000029/4 (GnomAD)
HGVS:: NC_000019.10:g.36685865A>C, NC_000019.9:g.37176767A>C, NR_110707.1:n.454T>G, NR_110708.1:n.454T>G

Select item 144023327411.

rs1440233274 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:36687366 (GRCh38)
19:37178268 (GRCh37)
Canonical SPDI:: NC_000019.10:36687365:C:G
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,non_coding_transcript_variant,genic_upstream_transcript_variant,5_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: G=0.0002/1 (ALFA)
G=0.0002/1 (Estonian)
HGVS:: NC_000019.10:g.36687366C>G, NC_000019.9:g.37178268C>G, NM_001387762.1:c.-436C>G, NM_001387761.1:c.-436C>G, XM_047438320.1:c.-566C>G, XM_047438329.1:c.-566C>G, XM_047438330.1:c.-436C>G, XM_047438331.1:c.-432C>G, XM_047438332.1:c.-566C>G, XM_047438334.1:c.-560C>G, XM_047438333.1:c.-436C>G, NR_110707.1:n.84G>C, NR_110708.1:n.84G>C

Select item 143327386112.

rs1433273861 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:36685472 (GRCh38)
19:37176374 (GRCh37)
Canonical SPDI:: NC_000019.10:36685471:G:T
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.36685472G>T, NC_000019.9:g.37176374G>T, NR_110707.1:n.847C>A, NR_110708.1:n.522C>A

Select item 142818342513.

rs1428183425 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 19:36686701 (GRCh38)
19:37177603 (GRCh37)
Canonical SPDI:: NC_000019.10:36686700:G:C
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000019.10:g.36686701G>C, NC_000019.9:g.37177603G>C, NR_110707.1:n.288C>G, NR_110708.1:n.288C>G

Select item 140788023214.

rs1407880232 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:36686004 (GRCh38)
19:37176906 (GRCh37)
Canonical SPDI:: NC_000019.10:36686003:A:G
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.36686004A>G, NC_000019.9:g.37176906A>G, NR_110707.1:n.315T>C, NR_110708.1:n.315T>C

Select item 140686611415.

rs1406866114 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:36687272 (GRCh38)
19:37178174 (GRCh37)
Canonical SPDI:: NC_000019.10:36687271:C:T
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,5_prime_UTR_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.36687272C>T, NC_000019.9:g.37178174C>T, NM_001387762.1:c.-530C>T, NM_001387761.1:c.-530C>T, XM_047438320.1:c.-660C>T, XM_047438329.1:c.-660C>T, XM_047438330.1:c.-530C>T, XM_047438331.1:c.-526C>T, XM_047438332.1:c.-660C>T, XM_047438334.1:c.-654C>T, XM_047438333.1:c.-530C>T, NR_110707.1:n.178G>A, NR_110708.1:n.178G>A

Select item 140553324016.

rs1405533240 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:36685920 (GRCh38)
19:37176822 (GRCh37)
Canonical SPDI:: NC_000019.10:36685919:C:T
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.36685920C>T, NC_000019.9:g.37176822C>T, NR_110707.1:n.399G>A, NR_110708.1:n.399G>A

Select item 140089286417.

rs1400892864 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 19:36686753 (GRCh38)
19:37177655 (GRCh37)
Canonical SPDI:: NC_000019.10:36686752:C:G,NC_000019.10:36686752:C:T
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,5_prime_UTR_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.36686753C>G, NC_000019.10:g.36686753C>T, NC_000019.9:g.37177655C>G, NC_000019.9:g.37177655C>T, NM_001387762.1:c.-1049C>G, NM_001387762.1:c.-1049C>T, NM_001387761.1:c.-1049C>G, NM_001387761.1:c.-1049C>T, XM_047438320.1:c.-1179C>G, XM_047438320.1:c.-1179C>T, XM_047438329.1:c.-1179C>G, XM_047438329.1:c.-1179C>T, XM_047438330.1:c.-1049C>G, XM_047438330.1:c.-1049C>T, XM_047438331.1:c.-1045C>G, XM_047438331.1:c.-1045C>T, XM_047438332.1:c.-1179C>G, XM_047438332.1:c.-1179C>T, XM_047438334.1:c.-1173C>G, XM_047438334.1:c.-1173C>T, XM_047438333.1:c.-1049C>G, XM_047438333.1:c.-1049C>T, NR_110707.1:n.236G>C, NR_110707.1:n.236G>A, NR_110708.1:n.236G>C, NR_110708.1:n.236G>A

Select item 139527374718.

rs1395273747 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 19:36686690 (GRCh38)
19:37177592 (GRCh37)
Canonical SPDI:: NC_000019.10:36686689:C:A,NC_000019.10:36686689:C:T
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000029/4 (GnomAD)
HGVS:: NC_000019.10:g.36686690C>A, NC_000019.10:g.36686690C>T, NC_000019.9:g.37177592C>A, NC_000019.9:g.37177592C>T, NR_110707.1:n.299G>T, NR_110707.1:n.299G>A, NR_110708.1:n.299G>T, NR_110708.1:n.299G>A

Select item 139243709319.

rs1392437093 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:36685916 (GRCh38)
19:37176818 (GRCh37)
Canonical SPDI:: NC_000019.10:36685915:G:A
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.36685916G>A, NC_000019.9:g.37176818G>A, NR_110707.1:n.403C>T, NR_110708.1:n.403C>T

Select item 139159331020.

rs1391593310 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:36687365 (GRCh38)
19:37178267 (GRCh37)
Canonical SPDI:: NC_000019.10:36687364:C:A
Gene:: ZNF567 (Varview), ZNF567-DT (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,5_prime_UTR_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.36687365C>A, NC_000019.9:g.37178267C>A, NM_001387762.1:c.-437C>A, NM_001387761.1:c.-437C>A, XM_047438320.1:c.-567C>A, XM_047438329.1:c.-567C>A, XM_047438330.1:c.-437C>A, XM_047438331.1:c.-433C>A, XM_047438332.1:c.-567C>A, XM_047438334.1:c.-561C>A, XM_047438333.1:c.-437C>A, NR_110707.1:n.85G>T, NR_110708.1:n.85G>T

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