SNP Links for Nucleotide (Select 586946427) - SNP

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Links from Nucleotide

Items: 1 to 20 of 146

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Select item 14881621651.

rs1488162165 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 19:37265464 (GRCh38)
19:37756366 (GRCh37)
Canonical SPDI:: NC_000019.10:37265463:C:A,NC_000019.10:37265463:C:T
Gene:: LOC284412 (Varview), LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_downstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00004/1 (TOMMO)
HGVS:: NC_000019.10:g.37265464C>A, NC_000019.10:g.37265464C>T, NC_000019.9:g.37756366C>A, NC_000019.9:g.37756366C>T, NR_110720.2:n.817C>A, NR_110720.2:n.817C>T, NR_110720.1:n.844C>A, NR_110720.1:n.844C>T, NR_110719.1:n.561C>A, NR_110719.1:n.561C>T

Select item 14878016432.

rs1487801643 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:37265373 (GRCh38)
19:37756275 (GRCh37)
Canonical SPDI:: NC_000019.10:37265372:C:T
Gene:: LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000034/9 (TOPMED)
T=0.000036/5 (GnomAD)
HGVS:: NC_000019.10:g.37265373C>T, NC_000019.9:g.37756275C>T, NR_110720.2:n.726C>T, NR_110720.1:n.753C>T, NR_110719.1:n.470C>T

Select item 14837097523.

rs1483709752 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:37265476 (GRCh38)
19:37756378 (GRCh37)
Canonical SPDI:: NC_000019.10:37265475:C:T
Gene:: LOC284412 (Varview), LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_downstream_transcript_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.37265476C>T, NC_000019.9:g.37756378C>T, NR_110720.2:n.829C>T, NR_110720.1:n.856C>T, NR_110719.1:n.573C>T

Select item 14790563774.

rs1479056377 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 19:37251959 (GRCh38)
19:37742861 (GRCh37)
Canonical SPDI:: NC_000019.10:37251958:A:T
Gene:: LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000019.10:g.37251959A>T, NC_000019.9:g.37742861A>T, NR_110720.2:n.49A>T, NR_110720.1:n.76A>T, NR_110718.1:n.75A>T, NR_110719.1:n.75A>T

Select item 14765633355.

rs1476563335 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:37251927 (GRCh38)
19:37742829 (GRCh37)
Canonical SPDI:: NC_000019.10:37251926:C:G
Gene:: LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.37251927C>G, NC_000019.9:g.37742829C>G, NR_110720.2:n.17C>G, NR_110720.1:n.44C>G, NR_110718.1:n.43C>G, NR_110719.1:n.43C>G

Select item 14733840206.

rs1473384020 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 19:37251985 (GRCh38)
19:37742887 (GRCh37)
Canonical SPDI:: NC_000019.10:37251984:T:A
Gene:: LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000019.10:g.37251985T>A, NC_000019.9:g.37742887T>A, NR_110720.2:n.75T>A, NR_110720.1:n.102T>A, NR_110718.1:n.101T>A, NR_110719.1:n.101T>A

Select item 14731082597.

rs1473108259 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 19:37255956 (GRCh38)
19:37746858 (GRCh37)
Canonical SPDI:: NC_000019.10:37255955:A:G,NC_000019.10:37255955:A:T
Gene:: LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.37255956A>G, NC_000019.10:g.37255956A>T, NC_000019.9:g.37746858A>G, NC_000019.9:g.37746858A>T, NR_110720.2:n.330A>G, NR_110720.2:n.330A>T, NR_110720.1:n.357A>G, NR_110720.1:n.357A>T, NR_110718.1:n.356A>G, NR_110718.1:n.356A>T, NR_110719.1:n.356A>G, NR_110719.1:n.356A>T

Select item 14672532298.

rs1467253229 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:37255981 (GRCh38)
19:37746883 (GRCh37)
Canonical SPDI:: NC_000019.10:37255980:A:G
Gene:: LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.37255981A>G, NC_000019.9:g.37746883A>G, NR_110720.2:n.355A>G, NR_110720.1:n.382A>G, NR_110718.1:n.381A>G, NR_110719.1:n.381A>G

Select item 14637988159.

rs1463798815 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATGGGAGCGCCTGCCTAAC>-,ATGGGAGCGCCTGCCTAACATGGGAGCGCCTGCCTAAC [Show Flanks]
Chromosome:: 19:37251984 (GRCh38)
19:37742886 (GRCh37)
Canonical SPDI:: NC_000019.10:37251968:GAGCGCCTGCCTAACATGGGAGCGCCTGCCTAAC:GAGCGCCTGCCTAAC,NC_000019.10:37251968:GAGCGCCTGCCTAACATGGGAGCGCCTGCCTAAC:GAGCGCCTGCCTAACATGGGAGCGCCTGCCTAACATGGGAGCGCCTGCCTAAC
Gene:: LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAGCGCCTGCCTAACATGGGAGCGCCTGCCTAACATGGGAGCGCCTGCCTAAC=0./0 (ALFA)
-=0.000021/3 (GnomAD)
-=0.000106/2 (TOMMO)
HGVS:: NC_000019.10:g.37251984_37252002del, NC_000019.10:g.37251984_37252002dup, NC_000019.9:g.37742886_37742904del, NC_000019.9:g.37742886_37742904dup, NR_110720.2:n.74_92del, NR_110720.2:n.74_92dup, NR_110720.1:n.101_119del, NR_110720.1:n.101_119dup, NR_110718.1:n.100_118del, NR_110718.1:n.100_118dup, NR_110719.1:n.100_118del, NR_110719.1:n.100_118dup

Select item 146055825810.

rs1460558258 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GCT [Show Flanks]
Chromosome:: 19:37255903 (GRCh38)
19:37746806 (GRCh37)
Canonical SPDI:: NC_000019.10:37255903:CTGCT:CTGCTGCT
Gene:: LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CTGCTGCT=0.000071/1 (ALFA)
CTG=0.000007/1 (GnomAD)
CTG=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.37255906_37255908dup, NC_000019.9:g.37746808_37746810dup, NR_110720.2:n.280_282dup, NR_110720.1:n.307_309dup, NR_110718.1:n.306_308dup, NR_110719.1:n.306_308dup

Select item 145638083111.

rs1456380831 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:37265326 (GRCh38)
19:37756228 (GRCh37)
Canonical SPDI:: NC_000019.10:37265325:A:G
Gene:: LINC01535 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.37265326A>G, NC_000019.9:g.37756228A>G, NR_110720.2:n.679A>G, NR_110720.1:n.706A>G, NR_110719.1:n.423A>G

Select item 145630104212.

rs1456301042 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 19:37265402 (GRCh38)
19:37756304 (GRCh37)
Canonical SPDI:: NC_000019.10:37265401:A:C
Gene:: LINC01535 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00034/4 (ALFA)
C=0.00011/2 (TOMMO)
HGVS:: NC_000019.10:g.37265402A>C, NC_000019.9:g.37756304A>C, NR_110720.2:n.755A>C, NR_110720.1:n.782A>C, NR_110719.1:n.499A>C

Select item 144799021113.

rs1447990211 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:37265357 (GRCh38)
19:37756259 (GRCh37)
Canonical SPDI:: NC_000019.10:37265356:C:T
Gene:: LINC01535 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000071/1 (TOMMO)
T=0.000156/1 (1000Genomes)
HGVS:: NC_000019.10:g.37265357C>T, NC_000019.9:g.37756259C>T, NR_110720.2:n.710C>T, NR_110720.1:n.737C>T, NR_110719.1:n.454C>T

Select item 144668291914.

rs1446682919 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:37265390 (GRCh38)
19:37756292 (GRCh37)
Canonical SPDI:: NC_000019.10:37265389:C:A
Gene:: LINC01535 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000019.10:g.37265390C>A, NC_000019.9:g.37756292C>A, NR_110720.2:n.743C>A, NR_110720.1:n.770C>A, NR_110719.1:n.487C>A

Select item 144409559615.

rs1444095596 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:37252076 (GRCh38)
19:37742978 (GRCh37)
Canonical SPDI:: NC_000019.10:37252075:C:T
Gene:: LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.37252076C>T, NC_000019.9:g.37742978C>T, NR_110720.2:n.166C>T, NR_110720.1:n.193C>T, NR_110718.1:n.192C>T, NR_110719.1:n.192C>T

Select item 144354100216.

rs1443541002 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:37251935 (GRCh38)
19:37742837 (GRCh37)
Canonical SPDI:: NC_000019.10:37251934:G:T
Gene:: LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.37251935G>T, NC_000019.9:g.37742837G>T, NR_110720.2:n.25G>T, NR_110720.1:n.52G>T, NR_110718.1:n.51G>T, NR_110719.1:n.51G>T

Select item 144316357417.

rs1443163574 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 19:37265307 (GRCh38)
19:37756209 (GRCh37)
Canonical SPDI:: NC_000019.10:37265306:C:G
Gene:: LINC01535 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000019.10:g.37265307C>G, NC_000019.9:g.37756209C>G, NR_110720.2:n.660C>G, NR_110720.1:n.687C>G, NR_110719.1:n.404C>G

Select item 144216934118.

rs1442169341 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 19:37251934 (GRCh38)
19:37742836 (GRCh37)
Canonical SPDI:: NC_000019.10:37251933:G:C,NC_000019.10:37251933:G:T
Gene:: LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
C=0.000156/1 (1000Genomes)
HGVS:: NC_000019.10:g.37251934G>C, NC_000019.10:g.37251934G>T, NC_000019.9:g.37742836G>C, NC_000019.9:g.37742836G>T, NR_110720.2:n.24G>C, NR_110720.2:n.24G>T, NR_110720.1:n.51G>C, NR_110720.1:n.51G>T, NR_110718.1:n.50G>C, NR_110718.1:n.50G>T, NR_110719.1:n.50G>C, NR_110719.1:n.50G>T

Select item 144215315019.

rs1442153150 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 19:37252100 (GRCh38)
19:37743002 (GRCh37)
Canonical SPDI:: NC_000019.10:37252099:G:A,NC_000019.10:37252099:G:C
Gene:: LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.37252100G>A, NC_000019.10:g.37252100G>C, NC_000019.9:g.37743002G>A, NC_000019.9:g.37743002G>C, NR_110720.2:n.190G>A, NR_110720.2:n.190G>C, NR_110720.1:n.217G>A, NR_110720.1:n.217G>C, NR_110718.1:n.216G>A, NR_110718.1:n.216G>C, NR_110719.1:n.216G>A, NR_110719.1:n.216G>C

Select item 143802177220.

rs1438021772 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 19:37252108 (GRCh38)
19:37743010 (GRCh37)
Canonical SPDI:: NC_000019.10:37252107:A:T
Gene:: LINC01535 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.37252108A>T, NC_000019.9:g.37743010A>T, NR_110720.2:n.198A>T, NR_110720.1:n.225A>T, NR_110718.1:n.224A>T, NR_110719.1:n.224A>T